Protein–RNA interactions for Protein: Q99687

MEIS3, Homeobox protein Meis3, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3Q99687 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.33□□□□□ -1.88
MEIS3Q99687 HMGB1P18-201ENST00000438801 619 ntBASIC3.33□□□□□ -1.88
MEIS3Q99687 AC079781.2-201ENST00000446424 169 ntBASIC3.33□□□□□ -1.88
MEIS3Q99687 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.33□□□□□ -1.88
MEIS3Q99687 PPP1R2P5-201ENST00000457256 603 ntBASIC3.33□□□□□ -1.88
MEIS3Q99687 AL162395.1-201ENST00000457882 422 ntBASIC3.33□□□□□ -1.88
MEIS3Q99687 MTCO2P29-201ENST00000465212 189 ntBASIC3.33□□□□□ -1.88
MEIS3Q99687 RN7SL330P-201ENST00000469709 307 ntBASIC3.33□□□□□ -1.88
MEIS3Q99687 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.33□□□□□ -1.88
MEIS3Q99687 RN7SL297P-201ENST00000483161 293 ntBASIC3.33□□□□□ -1.88
MEIS3Q99687 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.33□□□□□ -1.88
MEIS3Q99687 TMEM248P1-201ENST00000510579 951 ntBASIC3.33□□□□□ -1.88
MEIS3Q99687 RNU6-273P-201ENST00000516937 96 ntBASIC3.33□□□□□ -1.88
MEIS3Q99687 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.33□□□□□ -1.88
MEIS3Q99687 SNORA31.21-201ENST00000517180 77 ntBASIC3.33□□□□□ -1.88
MEIS3Q99687 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.33□□□□□ -1.88
MEIS3Q99687 AC093331.1-201ENST00000521474 169 ntBASIC3.33□□□□□ -1.88
MEIS3Q99687 AP003072.2-201ENST00000527756 676 ntBASIC3.33□□□□□ -1.88
MEIS3Q99687 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.33□□□□□ -1.88
MEIS3Q99687 AC087241.2-201ENST00000535801 324 ntBASIC3.33□□□□□ -1.88
MEIS3Q99687 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.33□□□□□ -1.88
MEIS3Q99687 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.33□□□□□ -1.88
MEIS3Q99687 AC005668.1-201ENST00000571142 476 ntBASIC3.33□□□□□ -1.88
MEIS3Q99687 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.33□□□□□ -1.88
MEIS3Q99687 AL360085.1-201ENST00000604713 532 ntBASIC3.33□□□□□ -1.88
MEIS3Q99687 CTHRC1P1-201ENST00000605383 469 ntBASIC3.33□□□□□ -1.88
MEIS3Q99687 AL603758.1-201ENST00000618654 241 ntBASIC3.33□□□□□ -1.88
MEIS3Q99687 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.33□□□□□ -1.88
MEIS3Q99687 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
MEIS3Q99687 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
MEIS3Q99687 ZNF33CP-201ENST00000432492 2030 ntBASIC3.32□□□□□ -1.88
MEIS3Q99687 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
MEIS3Q99687 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.32□□□□□ -1.88
MEIS3Q99687 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
MEIS3Q99687 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
MEIS3Q99687 RNU5A-8P-201ENST00000364102 114 ntBASIC3.32□□□□□ -1.88
MEIS3Q99687 RNU4-48P-201ENST00000365559 182 ntBASIC3.32□□□□□ -1.88
MEIS3Q99687 U3.29-201ENST00000391296 212 ntBASIC3.32□□□□□ -1.88
MEIS3Q99687 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
MEIS3Q99687 NUP35P1-201ENST00000422734 947 ntBASIC3.32□□□□□ -1.88
MEIS3Q99687 AL353729.1-201ENST00000425044 720 ntBASIC3.32□□□□□ -1.88
MEIS3Q99687 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.32□□□□□ -1.88
MEIS3Q99687 GPM6BP2-201ENST00000432046 144 ntBASIC3.32□□□□□ -1.88
MEIS3Q99687 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.32□□□□□ -1.88
MEIS3Q99687 GPM6BP1-201ENST00000446387 144 ntBASIC3.32□□□□□ -1.88
MEIS3Q99687 AL118520.1-201ENST00000450770 291 ntBASIC3.32□□□□□ -1.88
MEIS3Q99687 AL109933.2-201ENST00000452651 260 ntBASIC3.32□□□□□ -1.88
MEIS3Q99687 AL356010.1-201ENST00000456364 102 ntBASIC3.32□□□□□ -1.88
MEIS3Q99687 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.32□□□□□ -1.88
MEIS3Q99687 CEACAMP4-201ENST00000457676 421 ntBASIC3.32□□□□□ -1.88
MEIS3Q99687 RNU6-329P-201ENST00000459618 107 ntBASIC3.32□□□□□ -1.88
MEIS3Q99687 GMFBP1-201ENST00000467831 427 ntBASIC3.32□□□□□ -1.88
MEIS3Q99687 AC087385.1-201ENST00000475062 312 ntBASIC3.32□□□□□ -1.88
MEIS3Q99687 RPL23AP41-201ENST00000484754 458 ntBASIC3.32□□□□□ -1.88
MEIS3Q99687 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.32□□□□□ -1.88
MEIS3Q99687 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.32□□□□□ -1.88
MEIS3Q99687 AC017037.2-201ENST00000513850 890 ntBASIC3.32□□□□□ -1.88
MEIS3Q99687 RNU6-27P-201ENST00000516146 107 ntBASIC3.32□□□□□ -1.88
MEIS3Q99687 Y_RNA.665-201ENST00000516177 98 ntBASIC3.32□□□□□ -1.88
MEIS3Q99687 SNORD27.1-201ENST00000516319 72 ntBASIC3.32□□□□□ -1.88
MEIS3Q99687 AC100870.1-201ENST00000522035 505 ntBASIC3.32□□□□□ -1.88
MEIS3Q99687 AP005435.4-201ENST00000529514 284 ntBASIC3.32□□□□□ -1.88
MEIS3Q99687 PTP4A1P6-201ENST00000531034 478 ntBASIC3.32□□□□□ -1.88
MEIS3Q99687 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.32□□□□□ -1.88
MEIS3Q99687 AL118558.2-201ENST00000556294 238 ntBASIC3.32□□□□□ -1.88
MEIS3Q99687 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.32□□□□□ -1.88
MEIS3Q99687 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.32□□□□□ -1.88
MEIS3Q99687 AP001836.1-201ENST00000604675 523 ntBASIC3.32□□□□□ -1.88
MEIS3Q99687 RNU6-89P-201ENST00000606519 100 ntBASIC3.32□□□□□ -1.88
MEIS3Q99687 AC103710.3-201ENST00000608157 948 ntBASIC3.32□□□□□ -1.88
MEIS3Q99687 AC104237.2-201ENST00000612456 443 ntBASIC3.32□□□□□ -1.88
MEIS3Q99687 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.32□□□□□ -1.88
MEIS3Q99687 AC040168.1-201ENST00000623594 991 ntBASIC3.32□□□□□ -1.88
MEIS3Q99687 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.32□□□□□ -1.88
MEIS3Q99687 AC091925.2-201ENST00000625059 256 ntBASIC3.32□□□□□ -1.88
MEIS3Q99687 MTND4LP32-201ENST00000636111 270 ntBASIC3.32□□□□□ -1.88
MEIS3Q99687 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
MEIS3Q99687 AL365361.1-201ENST00000566942 3481 ntBASIC3.32□□□□□ -1.88
MEIS3Q99687 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.31□□□□□ -1.88
MEIS3Q99687 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
MEIS3Q99687 RNU6-859P-201ENST00000362728 107 ntBASIC3.31□□□□□ -1.88
MEIS3Q99687 RNU6-188P-201ENST00000364207 107 ntBASIC3.31□□□□□ -1.88
MEIS3Q99687 Y_RNA.231-201ENST00000364358 102 ntBASIC3.31□□□□□ -1.88
MEIS3Q99687 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
MEIS3Q99687 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
MEIS3Q99687 RNU6-38P-201ENST00000384085 107 ntBASIC3.31□□□□□ -1.88
MEIS3Q99687 Y_RNA.579-201ENST00000390939 94 ntBASIC3.31□□□□□ -1.88
MEIS3Q99687 RNU6-903P-201ENST00000391270 109 ntBASIC3.31□□□□□ -1.88
MEIS3Q99687 RNU2-36P-201ENST00000410361 191 ntBASIC3.31□□□□□ -1.88
MEIS3Q99687 RNU4-14P-201ENST00000410858 122 ntBASIC3.31□□□□□ -1.88
MEIS3Q99687 AC114491.1-201ENST00000416095 246 ntBASIC3.31□□□□□ -1.88
MEIS3Q99687 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.31□□□□□ -1.88
MEIS3Q99687 UBE2V1P13-201ENST00000436983 439 ntBASIC3.31□□□□□ -1.88
MEIS3Q99687 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
MEIS3Q99687 MTND4P19-201ENST00000446659 478 ntBASIC3.31□□□□□ -1.88
MEIS3Q99687 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.31□□□□□ -1.88
MEIS3Q99687 RNU6-333P-201ENST00000459117 107 ntBASIC3.31□□□□□ -1.88
MEIS3Q99687 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.31□□□□□ -1.88
MEIS3Q99687 RPL21P103-201ENST00000479921 488 ntBASIC3.31□□□□□ -1.88
MEIS3Q99687 RPL21P99-201ENST00000480369 423 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms