Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 AC005951.2-201ENST00000576282 495 ntBASIC3.68□□□□□ -1.82
HAPLN3Q96S86 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
HAPLN3Q96S86 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HAPLN3Q96S86 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HAPLN3Q96S86 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HAPLN3Q96S86 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HAPLN3Q96S86 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HAPLN3Q96S86 SNORD113-7-201ENST00000363762 77 ntBASIC3.67□□□□□ -1.82
HAPLN3Q96S86 RNA5SP167-201ENST00000365461 116 ntBASIC3.67□□□□□ -1.82
HAPLN3Q96S86 MIR606-201ENST00000384851 96 ntBASIC3.67□□□□□ -1.82
HAPLN3Q96S86 RNY4P36-201ENST00000391116 96 ntBASIC3.67□□□□□ -1.82
HAPLN3Q96S86 RN7SKP158-201ENST00000410453 326 ntBASIC3.67□□□□□ -1.82
HAPLN3Q96S86 RN7SKP53-201ENST00000411337 315 ntBASIC3.67□□□□□ -1.82
HAPLN3Q96S86 AL513331.1-201ENST00000411908 397 ntBASIC3.67□□□□□ -1.82
HAPLN3Q96S86 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.67□□□□□ -1.82
HAPLN3Q96S86 AC091286.1-201ENST00000431233 461 ntBASIC3.67□□□□□ -1.82
HAPLN3Q96S86 GPM6BP2-201ENST00000432046 144 ntBASIC3.67□□□□□ -1.82
HAPLN3Q96S86 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.67□□□□□ -1.82
HAPLN3Q96S86 GPM6BP1-201ENST00000446387 144 ntBASIC3.67□□□□□ -1.82
HAPLN3Q96S86 RNU7-152P-201ENST00000458982 64 ntBASIC3.67□□□□□ -1.82
HAPLN3Q96S86 AC084357.1-201ENST00000473404 255 ntBASIC3.67□□□□□ -1.82
HAPLN3Q96S86 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HAPLN3Q96S86 AL359273.1-201ENST00000510918 627 ntBASIC3.67□□□□□ -1.82
HAPLN3Q96S86 RNU6-123P-201ENST00000516163 102 ntBASIC3.67□□□□□ -1.82
HAPLN3Q96S86 RNU6-256P-201ENST00000516747 97 ntBASIC3.67□□□□□ -1.82
HAPLN3Q96S86 RNU6-677P-201ENST00000516914 101 ntBASIC3.67□□□□□ -1.82
HAPLN3Q96S86 RNA5SP454-201ENST00000517231 127 ntBASIC3.67□□□□□ -1.82
HAPLN3Q96S86 NDUFB9P3-201ENST00000521269 501 ntBASIC3.67□□□□□ -1.82
HAPLN3Q96S86 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.67□□□□□ -1.82
HAPLN3Q96S86 AC011602.1-201ENST00000546484 331 ntBASIC3.67□□□□□ -1.82
HAPLN3Q96S86 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HAPLN3Q96S86 AP001330.4-201ENST00000604350 154 ntBASIC3.67□□□□□ -1.82
HAPLN3Q96S86 AL080274.1-201ENST00000605565 220 ntBASIC3.67□□□□□ -1.82
HAPLN3Q96S86 AC007619.2-201ENST00000605743 379 ntBASIC3.67□□□□□ -1.82
HAPLN3Q96S86 AC012409.4-201ENST00000612923 249 ntBASIC3.67□□□□□ -1.82
HAPLN3Q96S86 AC103705.1-201ENST00000619013 241 ntBASIC3.67□□□□□ -1.82
HAPLN3Q96S86 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.67□□□□□ -1.82
HAPLN3Q96S86 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
HAPLN3Q96S86 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HAPLN3Q96S86 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HAPLN3Q96S86 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HAPLN3Q96S86 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.66□□□□□ -1.82
HAPLN3Q96S86 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.66□□□□□ -1.82
HAPLN3Q96S86 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
HAPLN3Q96S86 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.66□□□□□ -1.82
HAPLN3Q96S86 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HAPLN3Q96S86 SNORA4.3-201ENST00000365564 137 ntBASIC3.66□□□□□ -1.82
HAPLN3Q96S86 MIR514A1-201ENST00000385133 98 ntBASIC3.66□□□□□ -1.82
HAPLN3Q96S86 SNORA16.2-201ENST00000390991 127 ntBASIC3.66□□□□□ -1.82
HAPLN3Q96S86 MIR1290-201ENST00000408735 78 ntBASIC3.66□□□□□ -1.82
HAPLN3Q96S86 RNA5SP293-201ENST00000410527 113 ntBASIC3.66□□□□□ -1.82
HAPLN3Q96S86 AC074085.1-201ENST00000413598 418 ntBASIC3.66□□□□□ -1.82
HAPLN3Q96S86 BX682237.1-201ENST00000415016 335 ntBASIC3.66□□□□□ -1.82
HAPLN3Q96S86 SKA2P1-201ENST00000425592 390 ntBASIC3.66□□□□□ -1.82
HAPLN3Q96S86 RPL21P66-201ENST00000426566 466 ntBASIC3.66□□□□□ -1.82
HAPLN3Q96S86 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.66□□□□□ -1.82
HAPLN3Q96S86 HSPD1P21-201ENST00000436541 245 ntBASIC3.66□□□□□ -1.82
HAPLN3Q96S86 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.66□□□□□ -1.82
HAPLN3Q96S86 CEACAMP4-201ENST00000457676 421 ntBASIC3.66□□□□□ -1.82
HAPLN3Q96S86 AC010401.1-201ENST00000463867 348 ntBASIC3.66□□□□□ -1.82
HAPLN3Q96S86 AP001086.1-201ENST00000494882 321 ntBASIC3.66□□□□□ -1.82
HAPLN3Q96S86 AC110768.1-201ENST00000509222 400 ntBASIC3.66□□□□□ -1.82
HAPLN3Q96S86 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3.66□□□□□ -1.82
HAPLN3Q96S86 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.66□□□□□ -1.82
HAPLN3Q96S86 RNU6-927P-201ENST00000516199 100 ntBASIC3.66□□□□□ -1.82
HAPLN3Q96S86 SNORA70.18-201ENST00000516696 98 ntBASIC3.66□□□□□ -1.82
HAPLN3Q96S86 Y_RNA.711-201ENST00000516993 102 ntBASIC3.66□□□□□ -1.82
HAPLN3Q96S86 AP006245.1-201ENST00000522549 120 ntBASIC3.66□□□□□ -1.82
HAPLN3Q96S86 COPS8P3-201ENST00000526024 482 ntBASIC3.66□□□□□ -1.82
HAPLN3Q96S86 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.66□□□□□ -1.82
HAPLN3Q96S86 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.66□□□□□ -1.82
HAPLN3Q96S86 AC007179.3-201ENST00000604976 235 ntBASIC3.66□□□□□ -1.82
HAPLN3Q96S86 AC080078.3-201ENST00000605407 463 ntBASIC3.66□□□□□ -1.82
HAPLN3Q96S86 AC012531.5-201ENST00000611375 151 ntBASIC3.66□□□□□ -1.82
HAPLN3Q96S86 AC040896.1-201ENST00000613819 479 ntBASIC3.66□□□□□ -1.82
HAPLN3Q96S86 AL359547.2-201ENST00000615810 418 ntBASIC3.66□□□□□ -1.82
HAPLN3Q96S86 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.66□□□□□ -1.82
HAPLN3Q96S86 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.66□□□□□ -1.82
HAPLN3Q96S86 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HAPLN3Q96S86 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.66□□□□□ -1.82
HAPLN3Q96S86 AC068647.1-201ENST00000489539 2265 ntBASIC3.65□□□□□ -1.82
HAPLN3Q96S86 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
HAPLN3Q96S86 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.65□□□□□ -1.82
HAPLN3Q96S86 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
HAPLN3Q96S86 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.65□□□□□ -1.82
HAPLN3Q96S86 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
HAPLN3Q96S86 SNORD70.1-201ENST00000391007 85 ntBASIC3.65□□□□□ -1.83
HAPLN3Q96S86 EIF4E2P1-201ENST00000393781 255 ntBASIC3.65□□□□□ -1.83
HAPLN3Q96S86 AC245054.2-201ENST00000415639 319 ntBASIC3.65□□□□□ -1.83
HAPLN3Q96S86 DBIP2-201ENST00000419076 262 ntBASIC3.65□□□□□ -1.83
HAPLN3Q96S86 RPL27AP8-201ENST00000424277 446 ntBASIC3.65□□□□□ -1.83
HAPLN3Q96S86 HMGB1P27-201ENST00000431429 603 ntBASIC3.65□□□□□ -1.83
HAPLN3Q96S86 HMGN2P31-201ENST00000432430 273 ntBASIC3.65□□□□□ -1.83
HAPLN3Q96S86 FABP5P14-201ENST00000437273 393 ntBASIC3.65□□□□□ -1.83
HAPLN3Q96S86 RPL32P28-201ENST00000443577 397 ntBASIC3.65□□□□□ -1.83
HAPLN3Q96S86 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
HAPLN3Q96S86 RPL21P23-201ENST00000446654 460 ntBASIC3.65□□□□□ -1.83
HAPLN3Q96S86 FABP5P13-201ENST00000452144 328 ntBASIC3.65□□□□□ -1.83
HAPLN3Q96S86 RBMY2UP-201ENST00000453474 324 ntBASIC3.65□□□□□ -1.83
HAPLN3Q96S86 Y_RNA.631-201ENST00000459607 101 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms