Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.08□□□□□ -1.92
NEK1Q96PY6 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
NEK1Q96PY6 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.08□□□□□ -1.92
NEK1Q96PY6 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
NEK1Q96PY6 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
NEK1Q96PY6 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
NEK1Q96PY6 CR848007.1-201ENST00000442354 1699 ntBASIC3.08□□□□□ -1.92
NEK1Q96PY6 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
NEK1Q96PY6 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
NEK1Q96PY6 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.07□□□□□ -1.92
NEK1Q96PY6 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
NEK1Q96PY6 AC008669.1-201ENST00000565823 2178 ntBASIC3.07□□□□□ -1.92
NEK1Q96PY6 UBE2L2-201ENST00000254302 429 ntBASIC3.07□□□□□ -1.92
NEK1Q96PY6 VTRNA1-1-201ENST00000363120 99 ntBASIC3.07□□□□□ -1.92
NEK1Q96PY6 RNU6-1167P-201ENST00000363227 94 ntBASIC3.07□□□□□ -1.92
NEK1Q96PY6 RNU6-512P-201ENST00000364438 103 ntBASIC3.07□□□□□ -1.92
NEK1Q96PY6 RNU4-24P-201ENST00000364565 139 ntBASIC3.07□□□□□ -1.92
NEK1Q96PY6 RNU6-641P-201ENST00000384006 107 ntBASIC3.07□□□□□ -1.92
NEK1Q96PY6 Y_RNA.559-201ENST00000384686 107 ntBASIC3.07□□□□□ -1.92
NEK1Q96PY6 AL139397.2-201ENST00000404529 772 ntBASIC3.07□□□□□ -1.92
NEK1Q96PY6 AL663109.1-201ENST00000411498 844 ntBASIC3.07□□□□□ -1.92
NEK1Q96PY6 ZNF90P2-204ENST00000419323 1075 ntBASIC3.07□□□□□ -1.92
NEK1Q96PY6 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.07□□□□□ -1.92
NEK1Q96PY6 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.07□□□□□ -1.92
NEK1Q96PY6 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3.07□□□□□ -1.92
NEK1Q96PY6 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.07□□□□□ -1.92
NEK1Q96PY6 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.07□□□□□ -1.92
NEK1Q96PY6 DLGAP5P1-201ENST00000430307 464 ntBASIC3.07□□□□□ -1.92
NEK1Q96PY6 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.07□□□□□ -1.92
NEK1Q96PY6 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.07□□□□□ -1.92
NEK1Q96PY6 BNIP3P2-201ENST00000441221 577 ntBASIC3.07□□□□□ -1.92
NEK1Q96PY6 RPL39P40-201ENST00000445481 146 ntBASIC3.07□□□□□ -1.92
NEK1Q96PY6 AC105252.1-201ENST00000503089 286 ntBASIC3.07□□□□□ -1.92
NEK1Q96PY6 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.07□□□□□ -1.92
NEK1Q96PY6 MTCO3P7-201ENST00000510008 774 ntBASIC3.07□□□□□ -1.92
NEK1Q96PY6 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.07□□□□□ -1.92
NEK1Q96PY6 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.07□□□□□ -1.92
NEK1Q96PY6 RNA5SP471-201ENST00000516971 106 ntBASIC3.07□□□□□ -1.92
NEK1Q96PY6 RNU6-430P-201ENST00000517078 107 ntBASIC3.07□□□□□ -1.92
NEK1Q96PY6 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
NEK1Q96PY6 RPS3AP4-201ENST00000555161 764 ntBASIC3.07□□□□□ -1.92
NEK1Q96PY6 MTCO3P13-201ENST00000577757 781 ntBASIC3.07□□□□□ -1.92
NEK1Q96PY6 AC103987.3-201ENST00000582071 292 ntBASIC3.07□□□□□ -1.92
NEK1Q96PY6 AC034102.8-201ENST00000615146 484 ntBASIC3.07□□□□□ -1.92
NEK1Q96PY6 AC068880.5-201ENST00000624331 290 ntBASIC3.07□□□□□ -1.92
NEK1Q96PY6 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.07□□□□□ -1.92
NEK1Q96PY6 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
NEK1Q96PY6 AC073343.1-201ENST00000328239 651 ntBASIC3.06□□□□□ -1.92
NEK1Q96PY6 RNU6-960P-201ENST00000364056 120 ntBASIC3.06□□□□□ -1.92
NEK1Q96PY6 Y_RNA.245-201ENST00000364493 95 ntBASIC3.06□□□□□ -1.92
NEK1Q96PY6 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
NEK1Q96PY6 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
NEK1Q96PY6 OR5H15-201ENST00000383696 930 ntBASIC3.06□□□□□ -1.92
NEK1Q96PY6 RNU6-946P-201ENST00000383878 107 ntBASIC3.06□□□□□ -1.92
NEK1Q96PY6 RNU6-140P-201ENST00000384566 108 ntBASIC3.06□□□□□ -1.92
NEK1Q96PY6 RNU6-14P-201ENST00000384630 106 ntBASIC3.06□□□□□ -1.92
NEK1Q96PY6 RNU2-25P-201ENST00000411041 191 ntBASIC3.06□□□□□ -1.92
NEK1Q96PY6 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.06□□□□□ -1.92
NEK1Q96PY6 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.06□□□□□ -1.92
NEK1Q96PY6 MTND3P17-201ENST00000416968 344 ntBASIC3.06□□□□□ -1.92
NEK1Q96PY6 PIGFP2-201ENST00000421400 651 ntBASIC3.06□□□□□ -1.92
NEK1Q96PY6 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.06□□□□□ -1.92
NEK1Q96PY6 RPL36AP6-201ENST00000435770 321 ntBASIC3.06□□□□□ -1.92
NEK1Q96PY6 HMGB3P12-201ENST00000438745 556 ntBASIC3.06□□□□□ -1.92
NEK1Q96PY6 MTCO2P7-201ENST00000446518 666 ntBASIC3.06□□□□□ -1.92
NEK1Q96PY6 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.06□□□□□ -1.92
NEK1Q96PY6 TPT1P7-201ENST00000458300 517 ntBASIC3.06□□□□□ -1.92
NEK1Q96PY6 AC087588.1-201ENST00000462203 316 ntBASIC3.06□□□□□ -1.92
NEK1Q96PY6 RPS27AP9-201ENST00000477681 438 ntBASIC3.06□□□□□ -1.92
NEK1Q96PY6 AC126182.1-201ENST00000478134 357 ntBASIC3.06□□□□□ -1.92
NEK1Q96PY6 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.06□□□□□ -1.92
NEK1Q96PY6 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.06□□□□□ -1.92
NEK1Q96PY6 AC096725.1-201ENST00000514266 313 ntBASIC3.06□□□□□ -1.92
NEK1Q96PY6 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.06□□□□□ -1.92
NEK1Q96PY6 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.06□□□□□ -1.92
NEK1Q96PY6 SCARNA24.1-201ENST00000516465 137 ntBASIC3.06□□□□□ -1.92
NEK1Q96PY6 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.06□□□□□ -1.92
NEK1Q96PY6 AP003392.2-201ENST00000527269 208 ntBASIC3.06□□□□□ -1.92
NEK1Q96PY6 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.06□□□□□ -1.92
NEK1Q96PY6 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.06□□□□□ -1.92
NEK1Q96PY6 AC087683.1-201ENST00000591187 441 ntBASIC3.06□□□□□ -1.92
NEK1Q96PY6 AC098826.3-201ENST00000603823 466 ntBASIC3.06□□□□□ -1.92
NEK1Q96PY6 AL359198.2-201ENST00000611836 194 ntBASIC3.06□□□□□ -1.92
NEK1Q96PY6 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
NEK1Q96PY6 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
NEK1Q96PY6 RNU6-859P-201ENST00000362728 107 ntBASIC3.05□□□□□ -1.92
NEK1Q96PY6 RNU6-1042P-201ENST00000384204 107 ntBASIC3.05□□□□□ -1.92
NEK1Q96PY6 RNU2-39P-201ENST00000410604 198 ntBASIC3.05□□□□□ -1.92
NEK1Q96PY6 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.05□□□□□ -1.92
NEK1Q96PY6 AC114491.1-201ENST00000416095 246 ntBASIC3.05□□□□□ -1.92
NEK1Q96PY6 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.05□□□□□ -1.92
NEK1Q96PY6 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
NEK1Q96PY6 USP9YP14-201ENST00000430663 563 ntBASIC3.05□□□□□ -1.92
NEK1Q96PY6 AC079448.1-201ENST00000449377 373 ntBASIC3.05□□□□□ -1.92
NEK1Q96PY6 FDX1P2-201ENST00000450769 375 ntBASIC3.05□□□□□ -1.92
NEK1Q96PY6 FABP5P13-201ENST00000452144 328 ntBASIC3.05□□□□□ -1.92
NEK1Q96PY6 AC093899.1-201ENST00000457984 376 ntBASIC3.05□□□□□ -1.92
NEK1Q96PY6 RNU7-23P-201ENST00000459465 62 ntBASIC3.05□□□□□ -1.92
NEK1Q96PY6 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.05□□□□□ -1.92
NEK1Q96PY6 SNORA31.3-201ENST00000516029 96 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms