Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 AC064801.1-201ENST00000612025 407 ntBASIC4.09□□□□□ -1.75
PTCHD1Q96NR3 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC4.09□□□□□ -1.75
PTCHD1Q96NR3 AL021997.2-201ENST00000615674 271 ntBASIC4.09□□□□□ -1.75
PTCHD1Q96NR3 AL159153.1-201ENST00000619688 317 ntBASIC4.09□□□□□ -1.75
PTCHD1Q96NR3 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.09□□□□□ -1.75
PTCHD1Q96NR3 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PTCHD1Q96NR3 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
PTCHD1Q96NR3 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.09□□□□□ -1.76
PTCHD1Q96NR3 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
PTCHD1Q96NR3 AC010615.1-201ENST00000594254 1764 ntBASIC4.09□□□□□ -1.76
PTCHD1Q96NR3 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
PTCHD1Q96NR3 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PTCHD1Q96NR3 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PTCHD1Q96NR3 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PTCHD1Q96NR3 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PTCHD1Q96NR3 MIR448-201ENST00000362131 111 ntBASIC4.08□□□□□ -1.76
PTCHD1Q96NR3 Y_RNA.26-201ENST00000362539 101 ntBASIC4.08□□□□□ -1.76
PTCHD1Q96NR3 Y_RNA.64-201ENST00000362845 102 ntBASIC4.08□□□□□ -1.76
PTCHD1Q96NR3 RNU6-770P-201ENST00000363929 105 ntBASIC4.08□□□□□ -1.76
PTCHD1Q96NR3 Y_RNA.350-201ENST00000365409 98 ntBASIC4.08□□□□□ -1.76
PTCHD1Q96NR3 Y_RNA.376-201ENST00000365638 108 ntBASIC4.08□□□□□ -1.76
PTCHD1Q96NR3 Y_RNA.483-201ENST00000384380 101 ntBASIC4.08□□□□□ -1.76
PTCHD1Q96NR3 MIR34A-201ENST00000385130 110 ntBASIC4.08□□□□□ -1.76
PTCHD1Q96NR3 RNA5SP372-201ENST00000390836 115 ntBASIC4.08□□□□□ -1.76
PTCHD1Q96NR3 HDGFP1-201ENST00000405943 252 ntBASIC4.08□□□□□ -1.76
PTCHD1Q96NR3 RN7SKP177-201ENST00000410567 355 ntBASIC4.08□□□□□ -1.76
PTCHD1Q96NR3 SNORA74C-2-201ENST00000411179 201 ntBASIC4.08□□□□□ -1.76
PTCHD1Q96NR3 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC4.08□□□□□ -1.76
PTCHD1Q96NR3 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.08□□□□□ -1.76
PTCHD1Q96NR3 AC007560.1-201ENST00000426912 237 ntBASIC4.08□□□□□ -1.76
PTCHD1Q96NR3 RPL23AP52-201ENST00000439311 478 ntBASIC4.08□□□□□ -1.76
PTCHD1Q96NR3 FCF1P4-201ENST00000448326 183 ntBASIC4.08□□□□□ -1.76
PTCHD1Q96NR3 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PTCHD1Q96NR3 TPT1P12-201ENST00000448968 492 ntBASIC4.08□□□□□ -1.76
PTCHD1Q96NR3 SNORD127-201ENST00000458892 86 ntBASIC4.08□□□□□ -1.76
PTCHD1Q96NR3 AC010469.1-201ENST00000463864 576 ntBASIC4.08□□□□□ -1.76
PTCHD1Q96NR3 AC109327.1-201ENST00000471666 403 ntBASIC4.08□□□□□ -1.76
PTCHD1Q96NR3 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
PTCHD1Q96NR3 KC877373.1-201ENST00000479066 408 ntBASIC4.08□□□□□ -1.76
PTCHD1Q96NR3 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.08□□□□□ -1.76
PTCHD1Q96NR3 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.08□□□□□ -1.76
PTCHD1Q96NR3 PARP4P3-201ENST00000510265 317 ntBASIC4.08□□□□□ -1.76
PTCHD1Q96NR3 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC4.08□□□□□ -1.76
PTCHD1Q96NR3 RNU6-397P-201ENST00000516226 104 ntBASIC4.08□□□□□ -1.76
PTCHD1Q96NR3 SNORA31.8-201ENST00000516327 108 ntBASIC4.08□□□□□ -1.76
PTCHD1Q96NR3 SNORA70.16-201ENST00000516390 95 ntBASIC4.08□□□□□ -1.76
PTCHD1Q96NR3 RNU6-911P-201ENST00000516523 104 ntBASIC4.08□□□□□ -1.76
PTCHD1Q96NR3 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.08□□□□□ -1.76
PTCHD1Q96NR3 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.08□□□□□ -1.76
PTCHD1Q96NR3 IPO5P1-202ENST00000600039 287 ntBASIC4.08□□□□□ -1.76
PTCHD1Q96NR3 AC004805.2-201ENST00000605382 482 ntBASIC4.08□□□□□ -1.76
PTCHD1Q96NR3 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.08□□□□□ -1.76
PTCHD1Q96NR3 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC4.08□□□□□ -1.76
PTCHD1Q96NR3 U6.104-201ENST00000637979 90 ntBASIC4.08□□□□□ -1.76
PTCHD1Q96NR3 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
PTCHD1Q96NR3 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.08□□□□□ -1.76
PTCHD1Q96NR3 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
PTCHD1Q96NR3 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.08□□□□□ -1.76
PTCHD1Q96NR3 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
PTCHD1Q96NR3 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
PTCHD1Q96NR3 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PTCHD1Q96NR3 Y_RNA.19-201ENST00000362462 99 ntBASIC4.07□□□□□ -1.76
PTCHD1Q96NR3 RNU6-806P-201ENST00000365147 105 ntBASIC4.07□□□□□ -1.76
PTCHD1Q96NR3 AL590383.1-201ENST00000428602 75 ntBASIC4.07□□□□□ -1.76
PTCHD1Q96NR3 MTND3P9-201ENST00000429526 346 ntBASIC4.07□□□□□ -1.76
PTCHD1Q96NR3 HIGD1AP2-201ENST00000446367 280 ntBASIC4.07□□□□□ -1.76
PTCHD1Q96NR3 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.07□□□□□ -1.76
PTCHD1Q96NR3 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC4.07□□□□□ -1.76
PTCHD1Q96NR3 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PTCHD1Q96NR3 AC104164.2-201ENST00000496953 495 ntBASIC4.07□□□□□ -1.76
PTCHD1Q96NR3 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.07□□□□□ -1.76
PTCHD1Q96NR3 AC023141.12-201ENST00000512399 199 ntBASIC4.07□□□□□ -1.76
PTCHD1Q96NR3 Y_RNA.680-201ENST00000516441 93 ntBASIC4.07□□□□□ -1.76
PTCHD1Q96NR3 RNA5SP165-201ENST00000517142 115 ntBASIC4.07□□□□□ -1.76
PTCHD1Q96NR3 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PTCHD1Q96NR3 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.07□□□□□ -1.76
PTCHD1Q96NR3 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.07□□□□□ -1.76
PTCHD1Q96NR3 AMZ2P1-203ENST00000565833 850 ntBASIC4.07□□□□□ -1.76
PTCHD1Q96NR3 AC023575.1-201ENST00000580510 358 ntBASIC4.07□□□□□ -1.76
PTCHD1Q96NR3 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.07□□□□□ -1.76
PTCHD1Q96NR3 SRGNP1-201ENST00000603392 451 ntBASIC4.07□□□□□ -1.76
PTCHD1Q96NR3 ARF4P1-201ENST00000605447 541 ntBASIC4.07□□□□□ -1.76
PTCHD1Q96NR3 AC009318.2-201ENST00000610917 651 ntBASIC4.07□□□□□ -1.76
PTCHD1Q96NR3 MIR6830-201ENST00000636015 70 ntBASIC4.07□□□□□ -1.76
PTCHD1Q96NR3 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PTCHD1Q96NR3 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PTCHD1Q96NR3 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
PTCHD1Q96NR3 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
PTCHD1Q96NR3 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.07□□□□□ -1.76
PTCHD1Q96NR3 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
PTCHD1Q96NR3 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
PTCHD1Q96NR3 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.07□□□□□ -1.76
PTCHD1Q96NR3 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
PTCHD1Q96NR3 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.06□□□□□ -1.76
PTCHD1Q96NR3 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PTCHD1Q96NR3 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
PTCHD1Q96NR3 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PTCHD1Q96NR3 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
PTCHD1Q96NR3 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PTCHD1Q96NR3 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms