Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 RNU6-393P-201ENST00000384475 107 ntBASIC2.89□□□□□ -1.95
CMTM3Q96MX0 RNU6-1127P-201ENST00000384580 107 ntBASIC2.89□□□□□ -1.95
CMTM3Q96MX0 U3.26-201ENST00000391236 204 ntBASIC2.89□□□□□ -1.95
CMTM3Q96MX0 U3.37-201ENST00000408528 213 ntBASIC2.89□□□□□ -1.95
CMTM3Q96MX0 RNA5SP44-201ENST00000410446 133 ntBASIC2.89□□□□□ -1.95
CMTM3Q96MX0 BX682237.1-201ENST00000415016 335 ntBASIC2.89□□□□□ -1.95
CMTM3Q96MX0 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.89□□□□□ -1.95
CMTM3Q96MX0 AL513477.1-202ENST00000417061 214 ntBASIC2.89□□□□□ -1.95
CMTM3Q96MX0 AC016831.2-201ENST00000417179 352 ntBASIC2.89□□□□□ -1.95
CMTM3Q96MX0 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.89□□□□□ -1.95
CMTM3Q96MX0 PTGES3P4-201ENST00000426243 356 ntBASIC2.89□□□□□ -1.95
CMTM3Q96MX0 AC004975.1-201ENST00000428733 208 ntBASIC2.89□□□□□ -1.95
CMTM3Q96MX0 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.89□□□□□ -1.95
CMTM3Q96MX0 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC2.89□□□□□ -1.95
CMTM3Q96MX0 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC2.89□□□□□ -1.95
CMTM3Q96MX0 UQCRHP3-201ENST00000451503 251 ntBASIC2.89□□□□□ -1.95
CMTM3Q96MX0 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.89□□□□□ -1.95
CMTM3Q96MX0 SCARNA18-201ENST00000459004 134 ntBASIC2.89□□□□□ -1.95
CMTM3Q96MX0 RNU6-261P-201ENST00000459506 102 ntBASIC2.89□□□□□ -1.95
CMTM3Q96MX0 AL672167.3-201ENST00000465951 960 ntBASIC2.89□□□□□ -1.95
CMTM3Q96MX0 AC107626.1-201ENST00000471084 183 ntBASIC2.89□□□□□ -1.95
CMTM3Q96MX0 GZMAP1-201ENST00000503054 631 ntBASIC2.89□□□□□ -1.95
CMTM3Q96MX0 AC019235.1-201ENST00000503847 207 ntBASIC2.89□□□□□ -1.95
CMTM3Q96MX0 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.89□□□□□ -1.95
CMTM3Q96MX0 HMGN1P11-201ENST00000508668 303 ntBASIC2.89□□□□□ -1.95
CMTM3Q96MX0 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.89□□□□□ -1.95
CMTM3Q96MX0 RNU5F-8P-201ENST00000515941 111 ntBASIC2.89□□□□□ -1.95
CMTM3Q96MX0 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.89□□□□□ -1.95
CMTM3Q96MX0 SCARNA17.1-201ENST00000516211 143 ntBASIC2.89□□□□□ -1.95
CMTM3Q96MX0 SCARNA17.2-201ENST00000516334 143 ntBASIC2.89□□□□□ -1.95
CMTM3Q96MX0 Y_RNA.693-201ENST00000516641 110 ntBASIC2.89□□□□□ -1.95
CMTM3Q96MX0 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC2.89□□□□□ -1.95
CMTM3Q96MX0 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CMTM3Q96MX0 AC025678.1-201ENST00000567861 338 ntBASIC2.89□□□□□ -1.95
CMTM3Q96MX0 AC015917.1-201ENST00000579654 510 ntBASIC2.89□□□□□ -1.95
CMTM3Q96MX0 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CMTM3Q96MX0 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC2.89□□□□□ -1.95
CMTM3Q96MX0 BNIP3P30-201ENST00000601184 574 ntBASIC2.89□□□□□ -1.95
CMTM3Q96MX0 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.89□□□□□ -1.95
CMTM3Q96MX0 AC007621.1-201ENST00000604544 437 ntBASIC2.89□□□□□ -1.95
CMTM3Q96MX0 AC092954.2-201ENST00000609103 430 ntBASIC2.89□□□□□ -1.95
CMTM3Q96MX0 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.89□□□□□ -1.95
CMTM3Q96MX0 SCARNA17.4-201ENST00000614296 143 ntBASIC2.89□□□□□ -1.95
CMTM3Q96MX0 AL354798.1-201ENST00000622505 329 ntBASIC2.89□□□□□ -1.95
CMTM3Q96MX0 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CMTM3Q96MX0 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
CMTM3Q96MX0 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.88□□□□□ -1.95
CMTM3Q96MX0 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.88□□□□□ -1.95
CMTM3Q96MX0 AL355596.1-201ENST00000565399 3996 ntBASIC2.88□□□□□ -1.95
CMTM3Q96MX0 AC004520.1-201ENST00000608362 1413 ntBASIC2.88□□□□□ -1.95
CMTM3Q96MX0 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.88□□□□□ -1.95
CMTM3Q96MX0 MIR372-201ENST00000362225 67 ntBASIC2.88□□□□□ -1.95
CMTM3Q96MX0 RNU6-434P-201ENST00000384376 107 ntBASIC2.88□□□□□ -1.95
CMTM3Q96MX0 MIR30B-201ENST00000384850 88 ntBASIC2.88□□□□□ -1.95
CMTM3Q96MX0 SNORD70.1-201ENST00000391007 85 ntBASIC2.88□□□□□ -1.95
CMTM3Q96MX0 RPL32P23-201ENST00000397237 405 ntBASIC2.88□□□□□ -1.95
CMTM3Q96MX0 RNU2-3P-201ENST00000410144 191 ntBASIC2.88□□□□□ -1.95
CMTM3Q96MX0 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.88□□□□□ -1.95
CMTM3Q96MX0 BMS1P22-201ENST00000414726 313 ntBASIC2.88□□□□□ -1.95
CMTM3Q96MX0 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC2.88□□□□□ -1.95
CMTM3Q96MX0 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.88□□□□□ -1.95
CMTM3Q96MX0 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CMTM3Q96MX0 AC091390.1-201ENST00000433904 331 ntBASIC2.88□□□□□ -1.95
CMTM3Q96MX0 MTND1P34-201ENST00000438556 671 ntBASIC2.88□□□□□ -1.95
CMTM3Q96MX0 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC2.88□□□□□ -1.95
CMTM3Q96MX0 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.88□□□□□ -1.95
CMTM3Q96MX0 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.88□□□□□ -1.95
CMTM3Q96MX0 RN7SL75P-201ENST00000461926 281 ntBASIC2.88□□□□□ -1.95
CMTM3Q96MX0 RN7SL499P-201ENST00000481141 276 ntBASIC2.88□□□□□ -1.95
CMTM3Q96MX0 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC2.88□□□□□ -1.95
CMTM3Q96MX0 RPL9P33-201ENST00000484311 566 ntBASIC2.88□□□□□ -1.95
CMTM3Q96MX0 MTND4LP31-201ENST00000514859 294 ntBASIC2.88□□□□□ -1.95
CMTM3Q96MX0 RN7SKP43-201ENST00000516173 320 ntBASIC2.88□□□□□ -1.95
CMTM3Q96MX0 ACA59.2-201ENST00000517061 156 ntBASIC2.88□□□□□ -1.95
CMTM3Q96MX0 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.88□□□□□ -1.95
CMTM3Q96MX0 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.88□□□□□ -1.95
CMTM3Q96MX0 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.88□□□□□ -1.95
CMTM3Q96MX0 AL512310.1-201ENST00000548639 172 ntBASIC2.88□□□□□ -1.95
CMTM3Q96MX0 AL512360.1-201ENST00000555346 234 ntBASIC2.88□□□□□ -1.95
CMTM3Q96MX0 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC2.88□□□□□ -1.95
CMTM3Q96MX0 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC2.88□□□□□ -1.95
CMTM3Q96MX0 MIR5685-201ENST00000579080 79 ntBASIC2.88□□□□□ -1.95
CMTM3Q96MX0 LRRC37A5P-203ENST00000580181 585 ntBASIC2.88□□□□□ -1.95
CMTM3Q96MX0 AC012557.2-201ENST00000605919 418 ntBASIC2.88□□□□□ -1.95
CMTM3Q96MX0 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.88□□□□□ -1.95
CMTM3Q96MX0 MIR7851-201ENST00000610611 160 ntBASIC2.88□□□□□ -1.95
CMTM3Q96MX0 uc_338.1-201ENST00000612113 180 ntBASIC2.88□□□□□ -1.95
CMTM3Q96MX0 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.88□□□□□ -1.95
CMTM3Q96MX0 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.88□□□□□ -1.95
CMTM3Q96MX0 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.88□□□□□ -1.95
CMTM3Q96MX0 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.88□□□□□ -1.95
CMTM3Q96MX0 MIR7515-201ENST00000637837 67 ntBASIC2.88□□□□□ -1.95
CMTM3Q96MX0 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.88□□□□□ -1.95
CMTM3Q96MX0 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.87□□□□□ -1.95
CMTM3Q96MX0 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CMTM3Q96MX0 AL354685.2-201ENST00000448218 1447 ntBASIC2.87□□□□□ -1.95
CMTM3Q96MX0 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
CMTM3Q96MX0 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CMTM3Q96MX0 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CMTM3Q96MX0 RNU6-1180P-201ENST00000364935 107 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms