Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AL138880.2-201ENST00000616214 239 ntBASIC3.8□□□□□ -1.8
CDK5RAP3Q96JB5 AC022306.2-201ENST00000617563 647 ntBASIC3.8□□□□□ -1.8
CDK5RAP3Q96JB5 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
CDK5RAP3Q96JB5 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CDK5RAP3Q96JB5 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.79□□□□□ -1.8
CDK5RAP3Q96JB5 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.79□□□□□ -1.8
CDK5RAP3Q96JB5 RNU6-82P-201ENST00000363970 107 ntBASIC3.79□□□□□ -1.8
CDK5RAP3Q96JB5 RNU6-434P-201ENST00000384376 107 ntBASIC3.79□□□□□ -1.8
CDK5RAP3Q96JB5 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CDK5RAP3Q96JB5 RNA5SP219-201ENST00000390940 113 ntBASIC3.79□□□□□ -1.8
CDK5RAP3Q96JB5 RNA5SP252-201ENST00000391131 119 ntBASIC3.79□□□□□ -1.8
CDK5RAP3Q96JB5 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.79□□□□□ -1.8
CDK5RAP3Q96JB5 RPS4XP7-201ENST00000406274 780 ntBASIC3.79□□□□□ -1.8
CDK5RAP3Q96JB5 RNU6-1148P-201ENST00000410992 104 ntBASIC3.79□□□□□ -1.8
CDK5RAP3Q96JB5 POLHP1-201ENST00000411806 470 ntBASIC3.79□□□□□ -1.8
CDK5RAP3Q96JB5 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.79□□□□□ -1.8
CDK5RAP3Q96JB5 BX682237.1-201ENST00000415016 335 ntBASIC3.79□□□□□ -1.8
CDK5RAP3Q96JB5 RPL21P90-201ENST00000415692 466 ntBASIC3.79□□□□□ -1.8
CDK5RAP3Q96JB5 RPL35AP12-201ENST00000425362 338 ntBASIC3.79□□□□□ -1.8
CDK5RAP3Q96JB5 SNRPEP8-201ENST00000442866 260 ntBASIC3.79□□□□□ -1.8
CDK5RAP3Q96JB5 MRPS31P2-201ENST00000451581 518 ntBASIC3.79□□□□□ -1.8
CDK5RAP3Q96JB5 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.79□□□□□ -1.8
CDK5RAP3Q96JB5 AP002812.1-201ENST00000495378 474 ntBASIC3.79□□□□□ -1.8
CDK5RAP3Q96JB5 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.79□□□□□ -1.8
CDK5RAP3Q96JB5 AC104136.1-201ENST00000512969 394 ntBASIC3.79□□□□□ -1.8
CDK5RAP3Q96JB5 AC114781.4-201ENST00000513707 639 ntBASIC3.79□□□□□ -1.8
CDK5RAP3Q96JB5 RNU2-69P-201ENST00000516061 100 ntBASIC3.79□□□□□ -1.8
CDK5RAP3Q96JB5 SNORA67.7-201ENST00000516664 135 ntBASIC3.79□□□□□ -1.8
CDK5RAP3Q96JB5 IGKV2-26-201ENST00000518305 343 ntBASIC3.79□□□□□ -1.8
CDK5RAP3Q96JB5 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.79□□□□□ -1.8
CDK5RAP3Q96JB5 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.79□□□□□ -1.8
CDK5RAP3Q96JB5 AC243972.3-201ENST00000539655 198 ntBASIC3.79□□□□□ -1.8
CDK5RAP3Q96JB5 OR11H5P-201ENST00000554039 926 ntBASIC3.79□□□□□ -1.8
CDK5RAP3Q96JB5 PSMA3P-201ENST00000555485 635 ntBASIC3.79□□□□□ -1.8
CDK5RAP3Q96JB5 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.79□□□□□ -1.8
CDK5RAP3Q96JB5 MIR5692A1-201ENST00000580523 69 ntBASIC3.79□□□□□ -1.8
CDK5RAP3Q96JB5 MIR3609-201ENST00000582661 80 ntBASIC3.79□□□□□ -1.8
CDK5RAP3Q96JB5 MIR548AC-201ENST00000585049 88 ntBASIC3.79□□□□□ -1.8
CDK5RAP3Q96JB5 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.79□□□□□ -1.8
CDK5RAP3Q96JB5 U2.17-201ENST00000611454 95 ntBASIC3.79□□□□□ -1.8
CDK5RAP3Q96JB5 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.79□□□□□ -1.8
CDK5RAP3Q96JB5 AC009248.2-201ENST00000619826 254 ntBASIC3.79□□□□□ -1.8
CDK5RAP3Q96JB5 SNORD39.4-201ENST00000620099 78 ntBASIC3.79□□□□□ -1.8
CDK5RAP3Q96JB5 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.79□□□□□ -1.8
CDK5RAP3Q96JB5 AL049641.1-201ENST00000441055 1948 ntBASIC3.79□□□□□ -1.8
CDK5RAP3Q96JB5 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.79□□□□□ -1.8
CDK5RAP3Q96JB5 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CDK5RAP3Q96JB5 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.79□□□□□ -1.8
CDK5RAP3Q96JB5 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CDK5RAP3Q96JB5 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CDK5RAP3Q96JB5 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CDK5RAP3Q96JB5 Y_RNA.100-201ENST00000363141 102 ntBASIC3.78□□□□□ -1.8
CDK5RAP3Q96JB5 RNU6-371P-201ENST00000364283 108 ntBASIC3.78□□□□□ -1.8
CDK5RAP3Q96JB5 RNU6-45P-201ENST00000384471 107 ntBASIC3.78□□□□□ -1.8
CDK5RAP3Q96JB5 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CDK5RAP3Q96JB5 HSPE1P1-201ENST00000421494 318 ntBASIC3.78□□□□□ -1.8
CDK5RAP3Q96JB5 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CDK5RAP3Q96JB5 AL645937.1-202ENST00000421799 937 ntBASIC3.78□□□□□ -1.8
CDK5RAP3Q96JB5 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.78□□□□□ -1.8
CDK5RAP3Q96JB5 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.78□□□□□ -1.8
CDK5RAP3Q96JB5 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.78□□□□□ -1.8
CDK5RAP3Q96JB5 PRPS1P1-201ENST00000445305 876 ntBASIC3.78□□□□□ -1.8
CDK5RAP3Q96JB5 CYCSP35-201ENST00000451978 304 ntBASIC3.78□□□□□ -1.8
CDK5RAP3Q96JB5 RPS4XP2-201ENST00000458402 793 ntBASIC3.78□□□□□ -1.8
CDK5RAP3Q96JB5 AL135752.1-201ENST00000479477 471 ntBASIC3.78□□□□□ -1.8
CDK5RAP3Q96JB5 AC006483.1-201ENST00000487308 313 ntBASIC3.78□□□□□ -1.8
CDK5RAP3Q96JB5 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.78□□□□□ -1.8
CDK5RAP3Q96JB5 NDUFB9P3-201ENST00000521269 501 ntBASIC3.78□□□□□ -1.8
CDK5RAP3Q96JB5 AP000867.2-201ENST00000532468 320 ntBASIC3.78□□□□□ -1.8
CDK5RAP3Q96JB5 AL157871.3-201ENST00000557231 293 ntBASIC3.78□□□□□ -1.8
CDK5RAP3Q96JB5 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.78□□□□□ -1.8
CDK5RAP3Q96JB5 MIR1273C-201ENST00000578669 77 ntBASIC3.78□□□□□ -1.8
CDK5RAP3Q96JB5 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.78□□□□□ -1.8
CDK5RAP3Q96JB5 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.78□□□□□ -1.8
CDK5RAP3Q96JB5 AC136601.2-201ENST00000604356 474 ntBASIC3.78□□□□□ -1.8
CDK5RAP3Q96JB5 AC025253.1-201ENST00000613623 543 ntBASIC3.78□□□□□ -1.8
CDK5RAP3Q96JB5 AL355365.1-201ENST00000616480 294 ntBASIC3.78□□□□□ -1.8
CDK5RAP3Q96JB5 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.78□□□□□ -1.8
CDK5RAP3Q96JB5 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.78□□□□□ -1.8
CDK5RAP3Q96JB5 AL079305.1-201ENST00000623159 3008 ntBASIC3.78□□□□□ -1.8
CDK5RAP3Q96JB5 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
CDK5RAP3Q96JB5 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CDK5RAP3Q96JB5 AC110774.1-201ENST00000623567 2018 ntBASIC3.77□□□□□ -1.81
CDK5RAP3Q96JB5 RNU6-845P-201ENST00000362578 103 ntBASIC3.77□□□□□ -1.81
CDK5RAP3Q96JB5 SNORA14A-201ENST00000364773 135 ntBASIC3.77□□□□□ -1.81
CDK5RAP3Q96JB5 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CDK5RAP3Q96JB5 MIR578-201ENST00000384828 96 ntBASIC3.77□□□□□ -1.81
CDK5RAP3Q96JB5 RNU6-1009P-201ENST00000390996 107 ntBASIC3.77□□□□□ -1.81
CDK5RAP3Q96JB5 SAR1AP2-201ENST00000392696 594 ntBASIC3.77□□□□□ -1.81
CDK5RAP3Q96JB5 AL158156.1-201ENST00000422509 473 ntBASIC3.77□□□□□ -1.81
CDK5RAP3Q96JB5 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.77□□□□□ -1.81
CDK5RAP3Q96JB5 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.77□□□□□ -1.81
CDK5RAP3Q96JB5 RPL21P40-201ENST00000428586 483 ntBASIC3.77□□□□□ -1.81
CDK5RAP3Q96JB5 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.77□□□□□ -1.81
CDK5RAP3Q96JB5 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.77□□□□□ -1.81
CDK5RAP3Q96JB5 AL031183.1-201ENST00000457667 207 ntBASIC3.77□□□□□ -1.81
CDK5RAP3Q96JB5 RPL21P10-201ENST00000463521 490 ntBASIC3.77□□□□□ -1.81
CDK5RAP3Q96JB5 DYNLL1P5-201ENST00000467158 270 ntBASIC3.77□□□□□ -1.81
CDK5RAP3Q96JB5 AC034236.1-201ENST00000469891 373 ntBASIC3.77□□□□□ -1.81
CDK5RAP3Q96JB5 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 133.2 ms