Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AL109809.4-201ENST00000603520 2185 ntBASIC2□□□□□ -2.09
ECHDC3Q96DC8 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
ECHDC3Q96DC8 RNU6-931P-201ENST00000363850 107 ntBASIC2□□□□□ -2.09
ECHDC3Q96DC8 SNORA16B-201ENST00000364674 135 ntBASIC2□□□□□ -2.09
ECHDC3Q96DC8 Z98749.2-208ENST00000381646 500 ntBASIC2□□□□□ -2.09
ECHDC3Q96DC8 RNU6-157P-201ENST00000383957 107 ntBASIC2□□□□□ -2.09
ECHDC3Q96DC8 RNU4-52P-201ENST00000384209 138 ntBASIC2□□□□□ -2.09
ECHDC3Q96DC8 RNU6-906P-201ENST00000384700 70 ntBASIC2□□□□□ -2.09
ECHDC3Q96DC8 AC119751.3-201ENST00000399720 670 ntBASIC2□□□□□ -2.09
ECHDC3Q96DC8 NDUFS5P1-201ENST00000405668 289 ntBASIC2□□□□□ -2.09
ECHDC3Q96DC8 GSTA9P-201ENST00000406231 611 ntBASIC2□□□□□ -2.09
ECHDC3Q96DC8 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2□□□□□ -2.09
ECHDC3Q96DC8 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2□□□□□ -2.09
ECHDC3Q96DC8 AC004383.1-201ENST00000438135 289 ntBASIC2□□□□□ -2.09
ECHDC3Q96DC8 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2□□□□□ -2.09
ECHDC3Q96DC8 AL021397.1-201ENST00000451806 248 ntBASIC2□□□□□ -2.09
ECHDC3Q96DC8 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2□□□□□ -2.09
ECHDC3Q96DC8 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC2□□□□□ -2.09
ECHDC3Q96DC8 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2□□□□□ -2.09
ECHDC3Q96DC8 RPL23AP41-201ENST00000484754 458 ntBASIC2□□□□□ -2.09
ECHDC3Q96DC8 AC022493.1-201ENST00000492984 337 ntBASIC2□□□□□ -2.09
ECHDC3Q96DC8 UBE2V1P12-201ENST00000503954 474 ntBASIC2□□□□□ -2.09
ECHDC3Q96DC8 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2□□□□□ -2.09
ECHDC3Q96DC8 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2□□□□□ -2.09
ECHDC3Q96DC8 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2□□□□□ -2.09
ECHDC3Q96DC8 MIR4765-201ENST00000585007 77 ntBASIC2□□□□□ -2.09
ECHDC3Q96DC8 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2□□□□□ -2.09
ECHDC3Q96DC8 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2□□□□□ -2.09
ECHDC3Q96DC8 AC073544.2-201ENST00000601155 540 ntBASIC2□□□□□ -2.09
ECHDC3Q96DC8 AC025165.5-201ENST00000602802 578 ntBASIC2□□□□□ -2.09
ECHDC3Q96DC8 AC009314.1-201ENST00000603871 304 ntBASIC2□□□□□ -2.09
ECHDC3Q96DC8 AC005014.3-201ENST00000605985 190 ntBASIC2□□□□□ -2.09
ECHDC3Q96DC8 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2□□□□□ -2.09
ECHDC3Q96DC8 PISRT1-201ENST00000626175 531 ntBASIC2□□□□□ -2.09
ECHDC3Q96DC8 ADAM3A-203ENST00000461344 2157 ntBASIC2□□□□□ -2.09
ECHDC3Q96DC8 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
ECHDC3Q96DC8 CDC27P3-201ENST00000635418 1910 ntBASIC1.99□□□□□ -2.09
ECHDC3Q96DC8 AL359854.1-201ENST00000614203 1594 ntBASIC1.99□□□□□ -2.09
ECHDC3Q96DC8 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
ECHDC3Q96DC8 RNA5SP160-201ENST00000364866 120 ntBASIC1.99□□□□□ -2.09
ECHDC3Q96DC8 RNA5SP37-201ENST00000365420 130 ntBASIC1.99□□□□□ -2.09
ECHDC3Q96DC8 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.99□□□□□ -2.09
ECHDC3Q96DC8 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.99□□□□□ -2.09
ECHDC3Q96DC8 RNU6-83P-201ENST00000384568 112 ntBASIC1.99□□□□□ -2.09
ECHDC3Q96DC8 RNU6-658P-201ENST00000384606 106 ntBASIC1.99□□□□□ -2.09
ECHDC3Q96DC8 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC1.99□□□□□ -2.09
ECHDC3Q96DC8 VPS26BP1-201ENST00000417155 755 ntBASIC1.99□□□□□ -2.09
ECHDC3Q96DC8 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.99□□□□□ -2.09
ECHDC3Q96DC8 BX276092.3-201ENST00000424182 230 ntBASIC1.99□□□□□ -2.09
ECHDC3Q96DC8 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC1.99□□□□□ -2.09
ECHDC3Q96DC8 TIMM9P1-201ENST00000436122 256 ntBASIC1.99□□□□□ -2.09
ECHDC3Q96DC8 BRK1P2-201ENST00000442875 223 ntBASIC1.99□□□□□ -2.09
ECHDC3Q96DC8 AC010095.1-201ENST00000443543 144 ntBASIC1.99□□□□□ -2.09
ECHDC3Q96DC8 OR6C5P-201ENST00000452388 923 ntBASIC1.99□□□□□ -2.09
ECHDC3Q96DC8 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.99□□□□□ -2.09
ECHDC3Q96DC8 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC1.99□□□□□ -2.09
ECHDC3Q96DC8 AC108059.3-201ENST00000456388 214 ntBASIC1.99□□□□□ -2.09
ECHDC3Q96DC8 YWHAEP4-201ENST00000505390 198 ntBASIC1.99□□□□□ -2.09
ECHDC3Q96DC8 MTND4P2-201ENST00000507767 1203 ntBASIC1.99□□□□□ -2.09
ECHDC3Q96DC8 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.99□□□□□ -2.09
ECHDC3Q96DC8 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.99□□□□□ -2.09
ECHDC3Q96DC8 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.99□□□□□ -2.09
ECHDC3Q96DC8 RNU6-1183P-201ENST00000517054 60 ntBASIC1.99□□□□□ -2.09
ECHDC3Q96DC8 AP000907.2-201ENST00000530827 353 ntBASIC1.99□□□□□ -2.09
ECHDC3Q96DC8 AL121821.2-201ENST00000556081 394 ntBASIC1.99□□□□□ -2.09
ECHDC3Q96DC8 DUXAP1-201ENST00000556632 463 ntBASIC1.99□□□□□ -2.09
ECHDC3Q96DC8 AL133241.1-201ENST00000556832 487 ntBASIC1.99□□□□□ -2.09
ECHDC3Q96DC8 AC105245.1-201ENST00000581934 244 ntBASIC1.99□□□□□ -2.09
ECHDC3Q96DC8 MIR6134-201ENST00000617606 109 ntBASIC1.99□□□□□ -2.09
ECHDC3Q96DC8 AC244517.12-201ENST00000623581 663 ntBASIC1.99□□□□□ -2.09
ECHDC3Q96DC8 AP003400.5-201ENST00000624827 617 ntBASIC1.99□□□□□ -2.09
ECHDC3Q96DC8 AC010608.3-201ENST00000625048 527 ntBASIC1.99□□□□□ -2.09
ECHDC3Q96DC8 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
ECHDC3Q96DC8 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.99□□□□□ -2.09
ECHDC3Q96DC8 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.98□□□□□ -2.09
ECHDC3Q96DC8 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.98□□□□□ -2.09
ECHDC3Q96DC8 ZNF29P-201ENST00000225587 168 ntBASIC1.98□□□□□ -2.09
ECHDC3Q96DC8 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC1.98□□□□□ -2.09
ECHDC3Q96DC8 MIR17-201ENST00000385012 84 ntBASIC1.98□□□□□ -2.09
ECHDC3Q96DC8 USP9YP6-201ENST00000413550 854 ntBASIC1.98□□□□□ -2.09
ECHDC3Q96DC8 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.98□□□□□ -2.09
ECHDC3Q96DC8 OR51A5P-201ENST00000415429 942 ntBASIC1.98□□□□□ -2.09
ECHDC3Q96DC8 MTCO2P21-201ENST00000419780 677 ntBASIC1.98□□□□□ -2.09
ECHDC3Q96DC8 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.98□□□□□ -2.09
ECHDC3Q96DC8 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC1.98□□□□□ -2.09
ECHDC3Q96DC8 AC093106.2-201ENST00000428212 385 ntBASIC1.98□□□□□ -2.09
ECHDC3Q96DC8 FABP5P14-201ENST00000437273 393 ntBASIC1.98□□□□□ -2.09
ECHDC3Q96DC8 AC016691.1-201ENST00000441321 413 ntBASIC1.98□□□□□ -2.09
ECHDC3Q96DC8 RPL23AP7-203ENST00000449021 469 ntBASIC1.98□□□□□ -2.09
ECHDC3Q96DC8 AL009048.1-201ENST00000450437 298 ntBASIC1.98□□□□□ -2.09
ECHDC3Q96DC8 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC1.98□□□□□ -2.09
ECHDC3Q96DC8 snoU13.26-201ENST00000459452 105 ntBASIC1.98□□□□□ -2.09
ECHDC3Q96DC8 AC090515.1-201ENST00000465295 476 ntBASIC1.98□□□□□ -2.09
ECHDC3Q96DC8 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.98□□□□□ -2.09
ECHDC3Q96DC8 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.98□□□□□ -2.09
ECHDC3Q96DC8 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.98□□□□□ -2.09
ECHDC3Q96DC8 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.98□□□□□ -2.09
ECHDC3Q96DC8 MTATP6P9-201ENST00000515039 680 ntBASIC1.98□□□□□ -2.09
ECHDC3Q96DC8 AC013828.2-201ENST00000532487 235 ntBASIC1.98□□□□□ -2.09
ECHDC3Q96DC8 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms