Protein–RNA interactions for Protein: Q96CM3

RPUSD4, Mitochondrial RNA pseudouridine synthase RPUSD4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4Q96CM3 AC126389.1-201ENST00000477436 290 ntBASIC2.06□□□□□ -2.08
RPUSD4Q96CM3 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.06□□□□□ -2.08
RPUSD4Q96CM3 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.06□□□□□ -2.08
RPUSD4Q96CM3 ARL2BPP4-201ENST00000506854 471 ntBASIC2.06□□□□□ -2.08
RPUSD4Q96CM3 AC117522.1-201ENST00000509821 380 ntBASIC2.06□□□□□ -2.08
RPUSD4Q96CM3 AC098591.2-201ENST00000510152 315 ntBASIC2.06□□□□□ -2.08
RPUSD4Q96CM3 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
RPUSD4Q96CM3 SCARNA24.1-201ENST00000516465 137 ntBASIC2.06□□□□□ -2.08
RPUSD4Q96CM3 Y_RNA.695-201ENST00000516715 107 ntBASIC2.06□□□□□ -2.08
RPUSD4Q96CM3 AL356057.1-201ENST00000533798 831 ntBASIC2.06□□□□□ -2.08
RPUSD4Q96CM3 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.06□□□□□ -2.08
RPUSD4Q96CM3 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.06□□□□□ -2.08
RPUSD4Q96CM3 AL157871.3-201ENST00000557231 293 ntBASIC2.06□□□□□ -2.08
RPUSD4Q96CM3 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.06□□□□□ -2.08
RPUSD4Q96CM3 MIR3944-201ENST00000581277 108 ntBASIC2.06□□□□□ -2.08
RPUSD4Q96CM3 AC245014.2-201ENST00000603689 287 ntBASIC2.06□□□□□ -2.08
RPUSD4Q96CM3 AC246785.4-201ENST00000605374 287 ntBASIC2.06□□□□□ -2.08
RPUSD4Q96CM3 AL139286.2-201ENST00000606838 396 ntBASIC2.06□□□□□ -2.08
RPUSD4Q96CM3 MIR15A-201ENST00000607334 83 ntBASIC2.06□□□□□ -2.08
RPUSD4Q96CM3 AC073114.1-201ENST00000612027 490 ntBASIC2.06□□□□□ -2.08
RPUSD4Q96CM3 AC011939.3-201ENST00000613686 466 ntBASIC2.06□□□□□ -2.08
RPUSD4Q96CM3 MIR6134-201ENST00000617606 109 ntBASIC2.06□□□□□ -2.08
RPUSD4Q96CM3 MTND5P17-201ENST00000418405 1603 ntBASIC2.06□□□□□ -2.08
RPUSD4Q96CM3 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.06□□□□□ -2.08
RPUSD4Q96CM3 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.05□□□□□ -2.08
RPUSD4Q96CM3 RNU6-1097P-201ENST00000363586 107 ntBASIC2.05□□□□□ -2.08
RPUSD4Q96CM3 RNU1-140P-201ENST00000365040 165 ntBASIC2.05□□□□□ -2.08
RPUSD4Q96CM3 U8.8-201ENST00000365399 135 ntBASIC2.05□□□□□ -2.08
RPUSD4Q96CM3 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.05□□□□□ -2.08
RPUSD4Q96CM3 MIR524-201ENST00000385242 87 ntBASIC2.05□□□□□ -2.08
RPUSD4Q96CM3 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
RPUSD4Q96CM3 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
RPUSD4Q96CM3 RN7SKP142-201ENST00000411236 328 ntBASIC2.05□□□□□ -2.08
RPUSD4Q96CM3 AC127391.1-201ENST00000411737 98 ntBASIC2.05□□□□□ -2.08
RPUSD4Q96CM3 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.05□□□□□ -2.08
RPUSD4Q96CM3 USP9YP6-201ENST00000413550 854 ntBASIC2.05□□□□□ -2.08
RPUSD4Q96CM3 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.05□□□□□ -2.08
RPUSD4Q96CM3 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.05□□□□□ -2.08
RPUSD4Q96CM3 USP9YP27-201ENST00000418455 438 ntBASIC2.05□□□□□ -2.08
RPUSD4Q96CM3 MTCYBP5-201ENST00000423752 1135 ntBASIC2.05□□□□□ -2.08
RPUSD4Q96CM3 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC2.05□□□□□ -2.08
RPUSD4Q96CM3 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
RPUSD4Q96CM3 MICF-203ENST00000432679 129 ntBASIC2.05□□□□□ -2.08
RPUSD4Q96CM3 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.05□□□□□ -2.08
RPUSD4Q96CM3 AC093899.1-201ENST00000457984 376 ntBASIC2.05□□□□□ -2.08
RPUSD4Q96CM3 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.05□□□□□ -2.08
RPUSD4Q96CM3 AC139453.3-201ENST00000493276 369 ntBASIC2.05□□□□□ -2.08
RPUSD4Q96CM3 AC080014.1-201ENST00000496877 1201 ntBASIC2.05□□□□□ -2.08
RPUSD4Q96CM3 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.05□□□□□ -2.08
RPUSD4Q96CM3 AC108043.1-201ENST00000512696 574 ntBASIC2.05□□□□□ -2.08
RPUSD4Q96CM3 MTCO3P28-201ENST00000513351 515 ntBASIC2.05□□□□□ -2.08
RPUSD4Q96CM3 AC022447.1-201ENST00000515358 464 ntBASIC2.05□□□□□ -2.08
RPUSD4Q96CM3 RNU5F-8P-201ENST00000515941 111 ntBASIC2.05□□□□□ -2.08
RPUSD4Q96CM3 SNORD27.1-201ENST00000516319 72 ntBASIC2.05□□□□□ -2.08
RPUSD4Q96CM3 RNU6-1183P-201ENST00000517054 60 ntBASIC2.05□□□□□ -2.08
RPUSD4Q96CM3 RNU6-685P-201ENST00000517088 95 ntBASIC2.05□□□□□ -2.08
RPUSD4Q96CM3 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.05□□□□□ -2.08
RPUSD4Q96CM3 AC022080.3-201ENST00000544433 482 ntBASIC2.05□□□□□ -2.08
RPUSD4Q96CM3 AC006199.1-201ENST00000548728 219 ntBASIC2.05□□□□□ -2.08
RPUSD4Q96CM3 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC2.05□□□□□ -2.08
RPUSD4Q96CM3 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.05□□□□□ -2.08
RPUSD4Q96CM3 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.05□□□□□ -2.08
RPUSD4Q96CM3 CYCSP39-201ENST00000565821 309 ntBASIC2.05□□□□□ -2.08
RPUSD4Q96CM3 AC007151.1-201ENST00000572774 483 ntBASIC2.05□□□□□ -2.08
RPUSD4Q96CM3 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.05□□□□□ -2.08
RPUSD4Q96CM3 SEPT7P9-203ENST00000604116 343 ntBASIC2.05□□□□□ -2.08
RPUSD4Q96CM3 AC012409.4-201ENST00000612923 249 ntBASIC2.05□□□□□ -2.08
RPUSD4Q96CM3 AC130324.3-201ENST00000614165 542 ntBASIC2.05□□□□□ -2.08
RPUSD4Q96CM3 AL133173.2-201ENST00000614270 90 ntBASIC2.05□□□□□ -2.08
RPUSD4Q96CM3 MIR8057-201ENST00000620957 69 ntBASIC2.05□□□□□ -2.08
RPUSD4Q96CM3 AL512643.1-201ENST00000635735 524 ntBASIC2.05□□□□□ -2.08
RPUSD4Q96CM3 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
RPUSD4Q96CM3 AC010889.1-201ENST00000566193 2666 ntBASIC2.05□□□□□ -2.08
RPUSD4Q96CM3 MTND4P35-201ENST00000604257 1375 ntBASIC2.05□□□□□ -2.08
RPUSD4Q96CM3 ELL2P3-201ENST00000457883 1602 ntBASIC2.05□□□□□ -2.08
RPUSD4Q96CM3 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
RPUSD4Q96CM3 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.05□□□□□ -2.08
RPUSD4Q96CM3 AC010329.5-201ENST00000623497 2174 ntBASIC2.05□□□□□ -2.08
RPUSD4Q96CM3 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.05□□□□□ -2.08
RPUSD4Q96CM3 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
RPUSD4Q96CM3 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
RPUSD4Q96CM3 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
RPUSD4Q96CM3 RNY4P34-201ENST00000364779 95 ntBASIC2.04□□□□□ -2.08
RPUSD4Q96CM3 RNU6-61P-201ENST00000365528 109 ntBASIC2.04□□□□□ -2.08
RPUSD4Q96CM3 SNORA4.3-201ENST00000365564 137 ntBASIC2.04□□□□□ -2.08
RPUSD4Q96CM3 RNU6-395P-201ENST00000365662 106 ntBASIC2.04□□□□□ -2.08
RPUSD4Q96CM3 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
RPUSD4Q96CM3 Z98749.2-208ENST00000381646 500 ntBASIC2.04□□□□□ -2.08
RPUSD4Q96CM3 SNORA24.1-201ENST00000384401 135 ntBASIC2.04□□□□□ -2.08
RPUSD4Q96CM3 MIR23B-201ENST00000384832 97 ntBASIC2.04□□□□□ -2.08
RPUSD4Q96CM3 RNA5SP171-201ENST00000391071 115 ntBASIC2.04□□□□□ -2.08
RPUSD4Q96CM3 SNORA48.5-201ENST00000391143 135 ntBASIC2.04□□□□□ -2.08
RPUSD4Q96CM3 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.04□□□□□ -2.08
RPUSD4Q96CM3 RNU2-49P-201ENST00000410666 184 ntBASIC2.04□□□□□ -2.08
RPUSD4Q96CM3 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
RPUSD4Q96CM3 AC092809.3-201ENST00000415453 231 ntBASIC2.04□□□□□ -2.08
RPUSD4Q96CM3 AL031779.1-201ENST00000415663 330 ntBASIC2.04□□□□□ -2.08
RPUSD4Q96CM3 RPLP0P7-201ENST00000416050 667 ntBASIC2.04□□□□□ -2.08
RPUSD4Q96CM3 C1DP2-201ENST00000418167 426 ntBASIC2.04□□□□□ -2.08
RPUSD4Q96CM3 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms