Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 SNORA51-201ENST00000606420 132 ntBASIC3.37□□□□□ -1.87
CTHRC1Q96CG8 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.37□□□□□ -1.87
CTHRC1Q96CG8 FAM157A-202ENST00000615155 405 ntBASIC3.37□□□□□ -1.87
CTHRC1Q96CG8 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.37□□□□□ -1.87
CTHRC1Q96CG8 AC099654.10-201ENST00000640395 161 ntBASIC3.37□□□□□ -1.87
CTHRC1Q96CG8 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.37□□□□□ -1.87
CTHRC1Q96CG8 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
CTHRC1Q96CG8 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CTHRC1Q96CG8 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CTHRC1Q96CG8 AC090740.1-201ENST00000623193 2262 ntBASIC3.37□□□□□ -1.87
CTHRC1Q96CG8 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CTHRC1Q96CG8 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CTHRC1Q96CG8 ZNF519P1-201ENST00000449011 1626 ntBASIC3.37□□□□□ -1.87
CTHRC1Q96CG8 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.37□□□□□ -1.87
CTHRC1Q96CG8 AC006504.1-201ENST00000562493 3666 ntBASIC3.37□□□□□ -1.87
CTHRC1Q96CG8 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CTHRC1Q96CG8 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
CTHRC1Q96CG8 AC005183.1-201ENST00000603687 1979 ntBASIC3.36□□□□□ -1.87
CTHRC1Q96CG8 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
CTHRC1Q96CG8 TNPO1P3-201ENST00000436471 2662 ntBASIC3.36□□□□□ -1.87
CTHRC1Q96CG8 Y_RNA.135-201ENST00000363439 95 ntBASIC3.36□□□□□ -1.87
CTHRC1Q96CG8 RNU6-1303P-201ENST00000364841 107 ntBASIC3.36□□□□□ -1.87
CTHRC1Q96CG8 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.36□□□□□ -1.87
CTHRC1Q96CG8 SNORA5A-201ENST00000384111 134 ntBASIC3.36□□□□□ -1.87
CTHRC1Q96CG8 Y_RNA.482-201ENST00000384377 111 ntBASIC3.36□□□□□ -1.87
CTHRC1Q96CG8 MIR23B-201ENST00000384832 97 ntBASIC3.36□□□□□ -1.87
CTHRC1Q96CG8 U3.39-201ENST00000408569 239 ntBASIC3.36□□□□□ -1.87
CTHRC1Q96CG8 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.36□□□□□ -1.87
CTHRC1Q96CG8 AL035423.1-201ENST00000420331 213 ntBASIC3.36□□□□□ -1.87
CTHRC1Q96CG8 RPS15AP6-201ENST00000420703 385 ntBASIC3.36□□□□□ -1.87
CTHRC1Q96CG8 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.36□□□□□ -1.87
CTHRC1Q96CG8 NDUFB4P6-201ENST00000436819 366 ntBASIC3.36□□□□□ -1.87
CTHRC1Q96CG8 AC087884.1-201ENST00000469738 328 ntBASIC3.36□□□□□ -1.87
CTHRC1Q96CG8 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.36□□□□□ -1.87
CTHRC1Q96CG8 RNU6-1153P-201ENST00000516760 105 ntBASIC3.36□□□□□ -1.87
CTHRC1Q96CG8 RNA5SP165-201ENST00000517142 115 ntBASIC3.36□□□□□ -1.87
CTHRC1Q96CG8 AC026403.1-201ENST00000518938 295 ntBASIC3.36□□□□□ -1.87
CTHRC1Q96CG8 AP006245.1-201ENST00000522549 120 ntBASIC3.36□□□□□ -1.87
CTHRC1Q96CG8 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.36□□□□□ -1.87
CTHRC1Q96CG8 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CTHRC1Q96CG8 AC025423.5-201ENST00000550230 219 ntBASIC3.36□□□□□ -1.87
CTHRC1Q96CG8 AC100830.2-201ENST00000581636 240 ntBASIC3.36□□□□□ -1.87
CTHRC1Q96CG8 MIR5690-201ENST00000583739 73 ntBASIC3.36□□□□□ -1.87
CTHRC1Q96CG8 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.36□□□□□ -1.87
CTHRC1Q96CG8 AL670379.10-201ENST00000604330 253 ntBASIC3.36□□□□□ -1.87
CTHRC1Q96CG8 AC006077.1-201ENST00000604746 343 ntBASIC3.36□□□□□ -1.87
CTHRC1Q96CG8 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC3.36□□□□□ -1.87
CTHRC1Q96CG8 AL670379.9-201ENST00000605428 253 ntBASIC3.36□□□□□ -1.87
CTHRC1Q96CG8 AC064836.2-201ENST00000609491 462 ntBASIC3.36□□□□□ -1.87
CTHRC1Q96CG8 AL355365.1-201ENST00000616480 294 ntBASIC3.36□□□□□ -1.87
CTHRC1Q96CG8 AC010378.1-201ENST00000619270 362 ntBASIC3.36□□□□□ -1.87
CTHRC1Q96CG8 AC119674.1-207ENST00000641355 633 ntBASIC3.36□□□□□ -1.87
CTHRC1Q96CG8 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
CTHRC1Q96CG8 AC007656.2-201ENST00000624902 4547 ntBASIC3.36□□□□□ -1.87
CTHRC1Q96CG8 AL049641.1-201ENST00000441055 1948 ntBASIC3.36□□□□□ -1.87
CTHRC1Q96CG8 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CTHRC1Q96CG8 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
CTHRC1Q96CG8 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.35□□□□□ -1.87
CTHRC1Q96CG8 CEP170P1-201ENST00000502249 4587 ntBASIC3.35□□□□□ -1.87
CTHRC1Q96CG8 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.35□□□□□ -1.87
CTHRC1Q96CG8 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
CTHRC1Q96CG8 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
CTHRC1Q96CG8 FRG1CP-201ENST00000358464 769 ntBASIC3.35□□□□□ -1.87
CTHRC1Q96CG8 SNORD9-201ENST00000362566 104 ntBASIC3.35□□□□□ -1.87
CTHRC1Q96CG8 Y_RNA.324-201ENST00000365165 102 ntBASIC3.35□□□□□ -1.87
CTHRC1Q96CG8 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CTHRC1Q96CG8 RNU6-140P-201ENST00000384566 108 ntBASIC3.35□□□□□ -1.87
CTHRC1Q96CG8 MIR200C-201ENST00000384980 68 ntBASIC3.35□□□□□ -1.87
CTHRC1Q96CG8 MIR449B-201ENST00000384995 97 ntBASIC3.35□□□□□ -1.87
CTHRC1Q96CG8 RNA5SP171-201ENST00000391071 115 ntBASIC3.35□□□□□ -1.87
CTHRC1Q96CG8 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.35□□□□□ -1.87
CTHRC1Q96CG8 TMEM167AP1-201ENST00000423409 219 ntBASIC3.35□□□□□ -1.87
CTHRC1Q96CG8 AC092047.1-201ENST00000424997 240 ntBASIC3.35□□□□□ -1.87
CTHRC1Q96CG8 TOMM20P4-201ENST00000427861 435 ntBASIC3.35□□□□□ -1.87
CTHRC1Q96CG8 AC005534.2-201ENST00000431047 433 ntBASIC3.35□□□□□ -1.87
CTHRC1Q96CG8 AC092573.2-201ENST00000434546 243 ntBASIC3.35□□□□□ -1.87
CTHRC1Q96CG8 MTND1P17-201ENST00000448961 204 ntBASIC3.35□□□□□ -1.87
CTHRC1Q96CG8 RPS23P3-201ENST00000470993 430 ntBASIC3.35□□□□□ -1.87
CTHRC1Q96CG8 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.35□□□□□ -1.87
CTHRC1Q96CG8 RPL21P13-201ENST00000488305 481 ntBASIC3.35□□□□□ -1.87
CTHRC1Q96CG8 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.35□□□□□ -1.87
CTHRC1Q96CG8 SLC25A15P5-201ENST00000508033 253 ntBASIC3.35□□□□□ -1.87
CTHRC1Q96CG8 HMGN1P11-201ENST00000508668 303 ntBASIC3.35□□□□□ -1.87
CTHRC1Q96CG8 RNU6-1170P-201ENST00000515974 106 ntBASIC3.35□□□□□ -1.87
CTHRC1Q96CG8 RNU1-61P-201ENST00000516107 151 ntBASIC3.35□□□□□ -1.87
CTHRC1Q96CG8 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.35□□□□□ -1.87
CTHRC1Q96CG8 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.35□□□□□ -1.87
CTHRC1Q96CG8 IMMP1LP2-201ENST00000552954 492 ntBASIC3.35□□□□□ -1.87
CTHRC1Q96CG8 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.35□□□□□ -1.87
CTHRC1Q96CG8 OR1M4P-201ENST00000589199 287 ntBASIC3.35□□□□□ -1.87
CTHRC1Q96CG8 AC136601.2-201ENST00000604356 474 ntBASIC3.35□□□□□ -1.87
CTHRC1Q96CG8 AC004805.2-201ENST00000605382 482 ntBASIC3.35□□□□□ -1.87
CTHRC1Q96CG8 RNU6-85P-201ENST00000605989 107 ntBASIC3.35□□□□□ -1.87
CTHRC1Q96CG8 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC3.35□□□□□ -1.87
CTHRC1Q96CG8 AC084781.2-201ENST00000615568 161 ntBASIC3.35□□□□□ -1.87
CTHRC1Q96CG8 AC099506.2-201ENST00000623074 221 ntBASIC3.35□□□□□ -1.87
CTHRC1Q96CG8 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.35□□□□□ -1.87
CTHRC1Q96CG8 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.35□□□□□ -1.87
CTHRC1Q96CG8 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.35□□□□□ -1.87
CTHRC1Q96CG8 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 171.4 ms