Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 FAM60BP-201ENST00000578364 658 ntBASIC4.25□□□□□ -1.73
RTF1Q92541 AC010928.3-201ENST00000587712 541 ntBASIC4.25□□□□□ -1.73
RTF1Q92541 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RTF1Q92541 IGKV1OR2-6-201ENST00000603485 277 ntBASIC4.25□□□□□ -1.73
RTF1Q92541 AL670379.4-201ENST00000605279 254 ntBASIC4.25□□□□□ -1.73
RTF1Q92541 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC4.25□□□□□ -1.73
RTF1Q92541 AC103705.1-201ENST00000619013 241 ntBASIC4.25□□□□□ -1.73
RTF1Q92541 AL160413.1-201ENST00000622780 310 ntBASIC4.25□□□□□ -1.73
RTF1Q92541 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
RTF1Q92541 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RTF1Q92541 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.25□□□□□ -1.73
RTF1Q92541 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RTF1Q92541 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RTF1Q92541 SNORA48.2-201ENST00000390926 124 ntBASIC4.24□□□□□ -1.73
RTF1Q92541 AL356057.2-201ENST00000403318 432 ntBASIC4.24□□□□□ -1.73
RTF1Q92541 Z92545.1-201ENST00000411782 234 ntBASIC4.24□□□□□ -1.73
RTF1Q92541 EI24P1-201ENST00000416584 867 ntBASIC4.24□□□□□ -1.73
RTF1Q92541 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC4.24□□□□□ -1.73
RTF1Q92541 RPS24P6-201ENST00000452670 400 ntBASIC4.24□□□□□ -1.73
RTF1Q92541 RN7SL863P-201ENST00000462370 296 ntBASIC4.24□□□□□ -1.73
RTF1Q92541 AC092451.1-201ENST00000480211 153 ntBASIC4.24□□□□□ -1.73
RTF1Q92541 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC4.24□□□□□ -1.73
RTF1Q92541 MLLT10P2-201ENST00000506434 249 ntBASIC4.24□□□□□ -1.73
RTF1Q92541 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4.24□□□□□ -1.73
RTF1Q92541 IGKV2-23-201ENST00000518729 323 ntBASIC4.24□□□□□ -1.73
RTF1Q92541 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.24□□□□□ -1.73
RTF1Q92541 HPRT1P3-201ENST00000539521 576 ntBASIC4.24□□□□□ -1.73
RTF1Q92541 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC4.24□□□□□ -1.73
RTF1Q92541 AL355836.1-201ENST00000555951 870 ntBASIC4.24□□□□□ -1.73
RTF1Q92541 AC005951.2-201ENST00000576282 495 ntBASIC4.24□□□□□ -1.73
RTF1Q92541 AC092747.3-201ENST00000603769 301 ntBASIC4.24□□□□□ -1.73
RTF1Q92541 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC4.24□□□□□ -1.73
RTF1Q92541 CTHRC1P1-201ENST00000605383 469 ntBASIC4.24□□□□□ -1.73
RTF1Q92541 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC4.24□□□□□ -1.73
RTF1Q92541 Z82243.1-201ENST00000609432 473 ntBASIC4.24□□□□□ -1.73
RTF1Q92541 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RTF1Q92541 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RTF1Q92541 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.24□□□□□ -1.73
RTF1Q92541 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC4.24□□□□□ -1.73
RTF1Q92541 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC4.23□□□□□ -1.73
RTF1Q92541 Y_RNA.58-201ENST00000362807 102 ntBASIC4.23□□□□□ -1.73
RTF1Q92541 Y_RNA.67-201ENST00000362870 100 ntBASIC4.23□□□□□ -1.73
RTF1Q92541 Y_RNA.154-201ENST00000363624 102 ntBASIC4.23□□□□□ -1.73
RTF1Q92541 RNY3P1-201ENST00000365085 102 ntBASIC4.23□□□□□ -1.73
RTF1Q92541 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.23□□□□□ -1.73
RTF1Q92541 RNY3-201ENST00000365484 102 ntBASIC4.23□□□□□ -1.73
RTF1Q92541 Y_RNA.384-201ENST00000383909 102 ntBASIC4.23□□□□□ -1.73
RTF1Q92541 Y_RNA.399-201ENST00000383955 105 ntBASIC4.23□□□□□ -1.73
RTF1Q92541 Y_RNA.490-201ENST00000384413 102 ntBASIC4.23□□□□□ -1.73
RTF1Q92541 MIR128-1-201ENST00000384921 82 ntBASIC4.23□□□□□ -1.73
RTF1Q92541 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
RTF1Q92541 EIF4E2P1-201ENST00000393781 255 ntBASIC4.23□□□□□ -1.73
RTF1Q92541 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC4.23□□□□□ -1.73
RTF1Q92541 AC079780.1-201ENST00000428259 207 ntBASIC4.23□□□□□ -1.73
RTF1Q92541 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.23□□□□□ -1.73
RTF1Q92541 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC4.23□□□□□ -1.73
RTF1Q92541 RPS29P2-201ENST00000479278 136 ntBASIC4.23□□□□□ -1.73
RTF1Q92541 RPL21P93-201ENST00000480465 489 ntBASIC4.23□□□□□ -1.73
RTF1Q92541 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.23□□□□□ -1.73
RTF1Q92541 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.23□□□□□ -1.73
RTF1Q92541 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.23□□□□□ -1.73
RTF1Q92541 RNU6-189P-201ENST00000516120 101 ntBASIC4.23□□□□□ -1.73
RTF1Q92541 MIR2276-201ENST00000516886 89 ntBASIC4.23□□□□□ -1.73
RTF1Q92541 RNU6-1231P-201ENST00000517185 103 ntBASIC4.23□□□□□ -1.73
RTF1Q92541 AC090136.1-201ENST00000520009 240 ntBASIC4.23□□□□□ -1.73
RTF1Q92541 AC106782.4-201ENST00000568264 210 ntBASIC4.23□□□□□ -1.73
RTF1Q92541 MIR4425-201ENST00000580572 84 ntBASIC4.23□□□□□ -1.73
RTF1Q92541 AL158032.1-201ENST00000605401 106 ntBASIC4.23□□□□□ -1.73
RTF1Q92541 AL360181.4-201ENST00000621752 134 ntBASIC4.23□□□□□ -1.73
RTF1Q92541 AL133216.2-202ENST00000634512 349 ntBASIC4.23□□□□□ -1.73
RTF1Q92541 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
RTF1Q92541 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.23□□□□□ -1.73
RTF1Q92541 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
RTF1Q92541 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RTF1Q92541 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RTF1Q92541 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.22□□□□□ -1.73
RTF1Q92541 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
RTF1Q92541 Y_RNA.387-201ENST00000383918 102 ntBASIC4.22□□□□□ -1.73
RTF1Q92541 SNORA48.5-201ENST00000391143 135 ntBASIC4.22□□□□□ -1.73
RTF1Q92541 RNA5SP111-201ENST00000411386 101 ntBASIC4.22□□□□□ -1.73
RTF1Q92541 AC080125.1-201ENST00000414888 684 ntBASIC4.22□□□□□ -1.73
RTF1Q92541 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.22□□□□□ -1.73
RTF1Q92541 AC091390.3-201ENST00000426478 338 ntBASIC4.22□□□□□ -1.73
RTF1Q92541 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.22□□□□□ -1.73
RTF1Q92541 HMGB1P27-201ENST00000431429 603 ntBASIC4.22□□□□□ -1.73
RTF1Q92541 CST9LP2-201ENST00000437612 320 ntBASIC4.22□□□□□ -1.73
RTF1Q92541 AC007677.1-201ENST00000445757 515 ntBASIC4.22□□□□□ -1.73
RTF1Q92541 HMGN2P21-201ENST00000447764 270 ntBASIC4.22□□□□□ -1.73
RTF1Q92541 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC4.22□□□□□ -1.73
RTF1Q92541 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC4.22□□□□□ -1.73
RTF1Q92541 HMGB3P30-201ENST00000457863 606 ntBASIC4.22□□□□□ -1.73
RTF1Q92541 AC010285.1-201ENST00000470580 392 ntBASIC4.22□□□□□ -1.73
RTF1Q92541 HIGD1AP13-201ENST00000509878 289 ntBASIC4.22□□□□□ -1.73
RTF1Q92541 AP000889.2-201ENST00000532684 490 ntBASIC4.22□□□□□ -1.73
RTF1Q92541 AL442663.2-201ENST00000554385 511 ntBASIC4.22□□□□□ -1.73
RTF1Q92541 ANP32BP3-201ENST00000559213 706 ntBASIC4.22□□□□□ -1.73
RTF1Q92541 MTCO3P23-201ENST00000561363 289 ntBASIC4.22□□□□□ -1.73
RTF1Q92541 MIR2682-201ENST00000580305 110 ntBASIC4.22□□□□□ -1.73
RTF1Q92541 DPPA3P3-201ENST00000603842 430 ntBASIC4.22□□□□□ -1.73
RTF1Q92541 AC064836.2-201ENST00000609491 462 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms