Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 MTND1P23-201ENST00000416931 372 ntBASIC1.79□□□□□ -2.12
SHROOM3Q8TF72 RPL7P37-201ENST00000425095 738 ntBASIC1.79□□□□□ -2.12
SHROOM3Q8TF72 TXNL1P1-201ENST00000429528 554 ntBASIC1.79□□□□□ -2.12
SHROOM3Q8TF72 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC1.79□□□□□ -2.12
SHROOM3Q8TF72 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC1.79□□□□□ -2.12
SHROOM3Q8TF72 AL445567.1-201ENST00000439121 144 ntBASIC1.79□□□□□ -2.12
SHROOM3Q8TF72 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC1.79□□□□□ -2.12
SHROOM3Q8TF72 MTND5P2-201ENST00000442927 1142 ntBASIC1.79□□□□□ -2.12
SHROOM3Q8TF72 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC1.79□□□□□ -2.12
SHROOM3Q8TF72 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.79□□□□□ -2.12
SHROOM3Q8TF72 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC1.79□□□□□ -2.12
SHROOM3Q8TF72 AC104685.1-201ENST00000502445 371 ntBASIC1.79□□□□□ -2.12
SHROOM3Q8TF72 AC109464.2-201ENST00000510242 943 ntBASIC1.79□□□□□ -2.12
SHROOM3Q8TF72 MIR449C-201ENST00000516047 92 ntBASIC1.79□□□□□ -2.12
SHROOM3Q8TF72 RNA5SP182-201ENST00000516064 82 ntBASIC1.79□□□□□ -2.12
SHROOM3Q8TF72 ERHP1-201ENST00000523006 310 ntBASIC1.79□□□□□ -2.12
SHROOM3Q8TF72 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.79□□□□□ -2.12
SHROOM3Q8TF72 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.79□□□□□ -2.12
SHROOM3Q8TF72 AC136618.2-201ENST00000575091 400 ntBASIC1.79□□□□□ -2.12
SHROOM3Q8TF72 UBE2L4-201ENST00000587688 464 ntBASIC1.79□□□□□ -2.12
SHROOM3Q8TF72 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
SHROOM3Q8TF72 MTND4P16-201ENST00000466108 1367 ntBASIC1.79□□□□□ -2.12
SHROOM3Q8TF72 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
SHROOM3Q8TF72 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
SHROOM3Q8TF72 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.79□□□□□ -2.12
SHROOM3Q8TF72 Y_RNA.354-201ENST00000365448 111 ntBASIC1.79□□□□□ -2.12
SHROOM3Q8TF72 RNU1-57P-201ENST00000384491 166 ntBASIC1.79□□□□□ -2.12
SHROOM3Q8TF72 MOB4-205ENST00000409916 829 ntTSL 3 BASIC1.79□□□□□ -2.12
SHROOM3Q8TF72 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC1.79□□□□□ -2.12
SHROOM3Q8TF72 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.79□□□□□ -2.12
SHROOM3Q8TF72 RPS27AP14-201ENST00000422868 454 ntBASIC1.79□□□□□ -2.12
SHROOM3Q8TF72 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.79□□□□□ -2.12
SHROOM3Q8TF72 TIMM9P1-201ENST00000436122 256 ntBASIC1.79□□□□□ -2.12
SHROOM3Q8TF72 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC1.79□□□□□ -2.12
SHROOM3Q8TF72 COX6CP12-201ENST00000446748 202 ntBASIC1.79□□□□□ -2.12
SHROOM3Q8TF72 AP000542.1-201ENST00000448473 371 ntBASIC1.79□□□□□ -2.12
SHROOM3Q8TF72 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.79□□□□□ -2.12
SHROOM3Q8TF72 SETP11-201ENST00000473027 690 ntBASIC1.79□□□□□ -2.12
SHROOM3Q8TF72 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
SHROOM3Q8TF72 ATP5EP1-201ENST00000510257 156 ntBASIC1.79□□□□□ -2.12
SHROOM3Q8TF72 AL359273.1-201ENST00000510918 627 ntBASIC1.79□□□□□ -2.12
SHROOM3Q8TF72 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.79□□□□□ -2.12
SHROOM3Q8TF72 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC1.79□□□□□ -2.12
SHROOM3Q8TF72 MTATP6P15-201ENST00000527233 835 ntBASIC1.79□□□□□ -2.12
SHROOM3Q8TF72 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.79□□□□□ -2.12
SHROOM3Q8TF72 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC1.79□□□□□ -2.12
SHROOM3Q8TF72 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.79□□□□□ -2.12
SHROOM3Q8TF72 SETP7-201ENST00000552169 453 ntBASIC1.79□□□□□ -2.12
SHROOM3Q8TF72 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC1.79□□□□□ -2.12
SHROOM3Q8TF72 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.79□□□□□ -2.12
SHROOM3Q8TF72 Z99497.2-201ENST00000603634 310 ntBASIC1.79□□□□□ -2.12
SHROOM3Q8TF72 AC008962.1-201ENST00000605729 304 ntBASIC1.79□□□□□ -2.12
SHROOM3Q8TF72 AC090186.1-201ENST00000605991 572 ntBASIC1.79□□□□□ -2.12
SHROOM3Q8TF72 AC107214.2-201ENST00000608204 634 ntBASIC1.79□□□□□ -2.12
SHROOM3Q8TF72 OR10AB1P-201ENST00000609613 938 ntBASIC1.79□□□□□ -2.12
SHROOM3Q8TF72 AC093838.1-201ENST00000613014 469 ntBASIC1.79□□□□□ -2.12
SHROOM3Q8TF72 MIR6895-201ENST00000613497 78 ntBASIC1.79□□□□□ -2.12
SHROOM3Q8TF72 AC084768.2-201ENST00000622736 221 ntBASIC1.79□□□□□ -2.12
SHROOM3Q8TF72 AC068057.2-201ENST00000624047 895 ntBASIC1.79□□□□□ -2.12
SHROOM3Q8TF72 AC091965.5-201ENST00000624785 342 ntBASIC1.79□□□□□ -2.12
SHROOM3Q8TF72 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC1.79□□□□□ -2.12
SHROOM3Q8TF72 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
SHROOM3Q8TF72 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
SHROOM3Q8TF72 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC1.78□□□□□ -2.12
SHROOM3Q8TF72 MIR767-201ENST00000390228 109 ntBASIC1.78□□□□□ -2.12
SHROOM3Q8TF72 RNU6-882P-201ENST00000391025 103 ntBASIC1.78□□□□□ -2.12
SHROOM3Q8TF72 RNU4-65P-201ENST00000410473 140 ntBASIC1.78□□□□□ -2.12
SHROOM3Q8TF72 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.78□□□□□ -2.12
SHROOM3Q8TF72 TPMTP3-201ENST00000411928 735 ntBASIC1.78□□□□□ -2.12
SHROOM3Q8TF72 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.78□□□□□ -2.12
SHROOM3Q8TF72 POLR2J4-204ENST00000418424 324 ntBASIC1.78□□□□□ -2.12
SHROOM3Q8TF72 LARP1BP3-201ENST00000437229 869 ntBASIC1.78□□□□□ -2.12
SHROOM3Q8TF72 USP9YP15-201ENST00000442391 422 ntBASIC1.78□□□□□ -2.12
SHROOM3Q8TF72 RPL17P49-201ENST00000443728 411 ntBASIC1.78□□□□□ -2.12
SHROOM3Q8TF72 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.78□□□□□ -2.12
SHROOM3Q8TF72 AMD1P1-201ENST00000457220 922 ntBASIC1.78□□□□□ -2.12
SHROOM3Q8TF72 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC1.78□□□□□ -2.12
SHROOM3Q8TF72 LTV1P1-201ENST00000510683 1237 ntBASIC1.78□□□□□ -2.12
SHROOM3Q8TF72 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC1.78□□□□□ -2.12
SHROOM3Q8TF72 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.78□□□□□ -2.12
SHROOM3Q8TF72 CBX3P4-201ENST00000538909 354 ntBASIC1.78□□□□□ -2.12
SHROOM3Q8TF72 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.78□□□□□ -2.12
SHROOM3Q8TF72 AC024614.2-201ENST00000577584 372 ntBASIC1.78□□□□□ -2.12
SHROOM3Q8TF72 AC008088.1-201ENST00000580993 280 ntBASIC1.78□□□□□ -2.12
SHROOM3Q8TF72 MIR5694-201ENST00000581190 76 ntBASIC1.78□□□□□ -2.12
SHROOM3Q8TF72 AP001429.1-201ENST00000602568 530 ntBASIC1.78□□□□□ -2.12
SHROOM3Q8TF72 AC011451.2-201ENST00000604303 598 ntBASIC1.78□□□□□ -2.12
SHROOM3Q8TF72 AC078883.4-201ENST00000623218 367 ntBASIC1.78□□□□□ -2.12
SHROOM3Q8TF72 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.78□□□□□ -2.12
SHROOM3Q8TF72 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
SHROOM3Q8TF72 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC1.78□□□□□ -2.13
SHROOM3Q8TF72 RNU6-97P-201ENST00000363387 104 ntBASIC1.78□□□□□ -2.13
SHROOM3Q8TF72 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.78□□□□□ -2.13
SHROOM3Q8TF72 RNU5A-2P-201ENST00000384337 116 ntBASIC1.78□□□□□ -2.13
SHROOM3Q8TF72 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC1.78□□□□□ -2.13
SHROOM3Q8TF72 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC1.78□□□□□ -2.13
SHROOM3Q8TF72 U3.20-201ENST00000390909 217 ntBASIC1.78□□□□□ -2.13
SHROOM3Q8TF72 PIGPP2-201ENST00000411569 458 ntBASIC1.78□□□□□ -2.13
SHROOM3Q8TF72 MTND1P21-201ENST00000412991 285 ntBASIC1.78□□□□□ -2.13
SHROOM3Q8TF72 BX682237.1-201ENST00000415016 335 ntBASIC1.78□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms