Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 MTCO3P13-201ENST00000577757 781 ntBASIC3.09□□□□□ -1.92
SNED1Q8TER0 MIR4637-201ENST00000582405 84 ntBASIC3.09□□□□□ -1.92
SNED1Q8TER0 SNORD39.3-201ENST00000584451 71 ntBASIC3.09□□□□□ -1.92
SNED1Q8TER0 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.09□□□□□ -1.92
SNED1Q8TER0 PART1_1.1-201ENST00000611761 217 ntBASIC3.09□□□□□ -1.92
SNED1Q8TER0 AL133173.2-201ENST00000614270 90 ntBASIC3.09□□□□□ -1.92
SNED1Q8TER0 AC009233.1-201ENST00000616477 371 ntBASIC3.09□□□□□ -1.92
SNED1Q8TER0 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.09□□□□□ -1.92
SNED1Q8TER0 AL353746.1-201ENST00000566293 6881 ntBASIC3.08□□□□□ -1.92
SNED1Q8TER0 AL021368.2-201ENST00000606125 5352 ntBASIC3.08□□□□□ -1.92
SNED1Q8TER0 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
SNED1Q8TER0 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SNED1Q8TER0 AP002907.1-201ENST00000606361 1430 ntBASIC3.08□□□□□ -1.92
SNED1Q8TER0 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SNED1Q8TER0 Y_RNA.86-201ENST00000363020 111 ntBASIC3.08□□□□□ -1.92
SNED1Q8TER0 RNU1-100P-201ENST00000365255 165 ntBASIC3.08□□□□□ -1.92
SNED1Q8TER0 RNU6-952P-201ENST00000391164 108 ntBASIC3.08□□□□□ -1.92
SNED1Q8TER0 EI24P2-201ENST00000397776 1076 ntBASIC3.08□□□□□ -1.92
SNED1Q8TER0 RNU2-8P-201ENST00000410727 190 ntBASIC3.08□□□□□ -1.92
SNED1Q8TER0 AL135786.1-201ENST00000415892 214 ntBASIC3.08□□□□□ -1.92
SNED1Q8TER0 USP9YP20-201ENST00000419224 558 ntBASIC3.08□□□□□ -1.92
SNED1Q8TER0 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.08□□□□□ -1.92
SNED1Q8TER0 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.08□□□□□ -1.92
SNED1Q8TER0 AC133104.1-201ENST00000429100 218 ntBASIC3.08□□□□□ -1.92
SNED1Q8TER0 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.08□□□□□ -1.92
SNED1Q8TER0 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.08□□□□□ -1.92
SNED1Q8TER0 SDCBPP1-201ENST00000440192 890 ntBASIC3.08□□□□□ -1.92
SNED1Q8TER0 CALM1P1-201ENST00000442082 433 ntBASIC3.08□□□□□ -1.92
SNED1Q8TER0 AC007677.1-201ENST00000445757 515 ntBASIC3.08□□□□□ -1.92
SNED1Q8TER0 AC104073.1-201ENST00000451988 151 ntBASIC3.08□□□□□ -1.92
SNED1Q8TER0 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.08□□□□□ -1.92
SNED1Q8TER0 RPS20P20-201ENST00000460498 340 ntBASIC3.08□□□□□ -1.92
SNED1Q8TER0 RN7SL636P-201ENST00000497504 294 ntBASIC3.08□□□□□ -1.92
SNED1Q8TER0 KLHL2P1-201ENST00000508691 521 ntBASIC3.08□□□□□ -1.92
SNED1Q8TER0 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.08□□□□□ -1.92
SNED1Q8TER0 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SNED1Q8TER0 ZNF705CP-201ENST00000530515 889 ntBASIC3.08□□□□□ -1.92
SNED1Q8TER0 AL389895.1-201ENST00000554127 252 ntBASIC3.08□□□□□ -1.92
SNED1Q8TER0 AL163153.1-201ENST00000554223 283 ntBASIC3.08□□□□□ -1.92
SNED1Q8TER0 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.08□□□□□ -1.92
SNED1Q8TER0 AC034268.2-201ENST00000571784 482 ntBASIC3.08□□□□□ -1.92
SNED1Q8TER0 MIR4795-201ENST00000584182 89 ntBASIC3.08□□□□□ -1.92
SNED1Q8TER0 AC011712.1-201ENST00000588959 234 ntBASIC3.08□□□□□ -1.92
SNED1Q8TER0 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.08□□□□□ -1.92
SNED1Q8TER0 AC007938.3-201ENST00000604965 623 ntBASIC3.08□□□□□ -1.92
SNED1Q8TER0 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.08□□□□□ -1.92
SNED1Q8TER0 AC093788.1-201ENST00000609356 927 ntBASIC3.08□□□□□ -1.92
SNED1Q8TER0 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.08□□□□□ -1.92
SNED1Q8TER0 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SNED1Q8TER0 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC3.07□□□□□ -1.92
SNED1Q8TER0 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.07□□□□□ -1.92
SNED1Q8TER0 RNU6-282P-201ENST00000365357 103 ntBASIC3.07□□□□□ -1.92
SNED1Q8TER0 Y_RNA.548-201ENST00000384656 105 ntBASIC3.07□□□□□ -1.92
SNED1Q8TER0 AL023807.1-201ENST00000407932 359 ntBASIC3.07□□□□□ -1.92
SNED1Q8TER0 AC080125.1-201ENST00000414888 684 ntBASIC3.07□□□□□ -1.92
SNED1Q8TER0 GTF2IP20-201ENST00000431663 360 ntBASIC3.07□□□□□ -1.92
SNED1Q8TER0 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.07□□□□□ -1.92
SNED1Q8TER0 HIGD1AP2-201ENST00000446367 280 ntBASIC3.07□□□□□ -1.92
SNED1Q8TER0 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.07□□□□□ -1.92
SNED1Q8TER0 ARPC3P5-201ENST00000448802 534 ntBASIC3.07□□□□□ -1.92
SNED1Q8TER0 SSXP4-201ENST00000451349 245 ntBASIC3.07□□□□□ -1.92
SNED1Q8TER0 HMGB1P25-201ENST00000468402 607 ntBASIC3.07□□□□□ -1.92
SNED1Q8TER0 RPL36AP51-201ENST00000487216 318 ntBASIC3.07□□□□□ -1.92
SNED1Q8TER0 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SNED1Q8TER0 TMEM251P1-201ENST00000503717 318 ntBASIC3.07□□□□□ -1.92
SNED1Q8TER0 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.07□□□□□ -1.92
SNED1Q8TER0 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.07□□□□□ -1.92
SNED1Q8TER0 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.07□□□□□ -1.92
SNED1Q8TER0 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.07□□□□□ -1.92
SNED1Q8TER0 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.07□□□□□ -1.92
SNED1Q8TER0 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.07□□□□□ -1.92
SNED1Q8TER0 HSPE1P3-201ENST00000559254 309 ntBASIC3.07□□□□□ -1.92
SNED1Q8TER0 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.07□□□□□ -1.92
SNED1Q8TER0 MAGOH2P-202ENST00000584384 429 ntBASIC3.07□□□□□ -1.92
SNED1Q8TER0 AC012119.1-201ENST00000603184 222 ntBASIC3.07□□□□□ -1.92
SNED1Q8TER0 AL136363.1-201ENST00000605349 337 ntBASIC3.07□□□□□ -1.92
SNED1Q8TER0 AC055876.5-201ENST00000605667 259 ntBASIC3.07□□□□□ -1.92
SNED1Q8TER0 AL390240.1-201ENST00000612950 384 ntBASIC3.07□□□□□ -1.92
SNED1Q8TER0 MIR7111-201ENST00000619751 72 ntBASIC3.07□□□□□ -1.92
SNED1Q8TER0 AC244517.1-201ENST00000606030 2086 ntBASIC3.07□□□□□ -1.92
SNED1Q8TER0 AC130650.2-201ENST00000618736 2403 ntBASIC3.07□□□□□ -1.92
SNED1Q8TER0 CCT4P2-201ENST00000233836 1548 ntBASIC3.07□□□□□ -1.92
SNED1Q8TER0 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SNED1Q8TER0 AC093010.3-201ENST00000570269 15214 ntBASIC3.06□□□□□ -1.92
SNED1Q8TER0 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SNED1Q8TER0 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.06□□□□□ -1.92
SNED1Q8TER0 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SNED1Q8TER0 RNU6-1322P-201ENST00000364309 107 ntBASIC3.06□□□□□ -1.92
SNED1Q8TER0 RNU6-730P-201ENST00000383954 104 ntBASIC3.06□□□□□ -1.92
SNED1Q8TER0 Y_RNA.460-201ENST00000384255 102 ntBASIC3.06□□□□□ -1.92
SNED1Q8TER0 RNU6-878P-201ENST00000384578 110 ntBASIC3.06□□□□□ -1.92
SNED1Q8TER0 AL512633.1-201ENST00000399931 655 ntBASIC3.06□□□□□ -1.92
SNED1Q8TER0 HMGB1P17-201ENST00000403495 628 ntBASIC3.06□□□□□ -1.92
SNED1Q8TER0 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.06□□□□□ -1.92
SNED1Q8TER0 MTND3P17-201ENST00000416968 344 ntBASIC3.06□□□□□ -1.92
SNED1Q8TER0 AL353193.1-201ENST00000421444 268 ntBASIC3.06□□□□□ -1.92
SNED1Q8TER0 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.06□□□□□ -1.92
SNED1Q8TER0 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.06□□□□□ -1.92
SNED1Q8TER0 RPS15AP17-201ENST00000470598 390 ntBASIC3.06□□□□□ -1.92
SNED1Q8TER0 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 136.3 ms