Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
SHKBP1Q8TBC3 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.53□□□□□ -1.68
SHKBP1Q8TBC3 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SHKBP1Q8TBC3 AC022893.2-201ENST00000564832 3296 ntBASIC4.53□□□□□ -1.68
SHKBP1Q8TBC3 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
SHKBP1Q8TBC3 LINC01355-201ENST00000566551 5444 ntBASIC4.53□□□□□ -1.68
SHKBP1Q8TBC3 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SHKBP1Q8TBC3 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SHKBP1Q8TBC3 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
SHKBP1Q8TBC3 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.53□□□□□ -1.69
SHKBP1Q8TBC3 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SHKBP1Q8TBC3 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
SHKBP1Q8TBC3 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
SHKBP1Q8TBC3 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SHKBP1Q8TBC3 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.52□□□□□ -1.69
SHKBP1Q8TBC3 AC008725.1-201ENST00000605123 2263 ntBASIC4.52□□□□□ -1.69
SHKBP1Q8TBC3 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
SHKBP1Q8TBC3 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
SHKBP1Q8TBC3 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
SHKBP1Q8TBC3 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SHKBP1Q8TBC3 RNU1-64P-201ENST00000365443 163 ntBASIC4.52□□□□□ -1.69
SHKBP1Q8TBC3 AC019155.1-201ENST00000382242 574 ntBASIC4.52□□□□□ -1.69
SHKBP1Q8TBC3 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
SHKBP1Q8TBC3 RNU6-1154P-201ENST00000391001 104 ntBASIC4.52□□□□□ -1.69
SHKBP1Q8TBC3 RNU6-918P-201ENST00000391219 106 ntBASIC4.52□□□□□ -1.69
SHKBP1Q8TBC3 RNU6-1135P-201ENST00000411083 103 ntBASIC4.52□□□□□ -1.69
SHKBP1Q8TBC3 EIF4A1P3-201ENST00000411521 244 ntBASIC4.52□□□□□ -1.69
SHKBP1Q8TBC3 AC063979.1-201ENST00000415539 377 ntBASIC4.52□□□□□ -1.69
SHKBP1Q8TBC3 AL591043.1-201ENST00000432461 424 ntBASIC4.52□□□□□ -1.69
SHKBP1Q8TBC3 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC4.52□□□□□ -1.69
SHKBP1Q8TBC3 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.52□□□□□ -1.69
SHKBP1Q8TBC3 RPL26P6-201ENST00000440913 438 ntBASIC4.52□□□□□ -1.69
SHKBP1Q8TBC3 RANP8-201ENST00000444720 713 ntBASIC4.52□□□□□ -1.69
SHKBP1Q8TBC3 AL031659.1-201ENST00000447075 539 ntBASIC4.52□□□□□ -1.69
SHKBP1Q8TBC3 PRDX3P3-201ENST00000447765 522 ntBASIC4.52□□□□□ -1.69
SHKBP1Q8TBC3 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SHKBP1Q8TBC3 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SHKBP1Q8TBC3 RPL35AP15-201ENST00000468042 339 ntBASIC4.52□□□□□ -1.69
SHKBP1Q8TBC3 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
SHKBP1Q8TBC3 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.52□□□□□ -1.69
SHKBP1Q8TBC3 HMGN1P11-201ENST00000508668 303 ntBASIC4.52□□□□□ -1.69
SHKBP1Q8TBC3 RNA5SP519-201ENST00000516480 119 ntBASIC4.52□□□□□ -1.69
SHKBP1Q8TBC3 SNORA31.18-201ENST00000517043 134 ntBASIC4.52□□□□□ -1.69
SHKBP1Q8TBC3 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.52□□□□□ -1.69
SHKBP1Q8TBC3 AP006245.1-201ENST00000522549 120 ntBASIC4.52□□□□□ -1.69
SHKBP1Q8TBC3 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.52□□□□□ -1.69
SHKBP1Q8TBC3 AL162424.1-201ENST00000602325 221 ntBASIC4.52□□□□□ -1.69
SHKBP1Q8TBC3 MIR6867-201ENST00000610636 67 ntBASIC4.52□□□□□ -1.69
SHKBP1Q8TBC3 MIR8076-201ENST00000611401 83 ntBASIC4.52□□□□□ -1.69
SHKBP1Q8TBC3 AC240442.1-201ENST00000616055 283 ntBASIC4.52□□□□□ -1.69
SHKBP1Q8TBC3 MIR7154-201ENST00000620673 73 ntBASIC4.52□□□□□ -1.69
SHKBP1Q8TBC3 AC091905.2-201ENST00000623143 306 ntBASIC4.52□□□□□ -1.69
SHKBP1Q8TBC3 AC097372.5-201ENST00000623665 376 ntBASIC4.52□□□□□ -1.69
SHKBP1Q8TBC3 AC010329.2-201ENST00000595195 2737 ntBASIC4.52□□□□□ -1.69
SHKBP1Q8TBC3 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.52□□□□□ -1.69
SHKBP1Q8TBC3 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SHKBP1Q8TBC3 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.52□□□□□ -1.69
SHKBP1Q8TBC3 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.51□□□□□ -1.69
SHKBP1Q8TBC3 AC139713.2-215ENST00000641428 5037 ntBASIC4.51□□□□□ -1.69
SHKBP1Q8TBC3 AC027228.2-201ENST00000567141 2154 ntBASIC4.51□□□□□ -1.69
SHKBP1Q8TBC3 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SHKBP1Q8TBC3 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SHKBP1Q8TBC3 RNU1-14P-201ENST00000362759 152 ntBASIC4.51□□□□□ -1.69
SHKBP1Q8TBC3 RNU4-90P-201ENST00000362773 141 ntBASIC4.51□□□□□ -1.69
SHKBP1Q8TBC3 RNA5SP175-201ENST00000364275 119 ntBASIC4.51□□□□□ -1.69
SHKBP1Q8TBC3 SNORA22C-201ENST00000384614 134 ntBASIC4.51□□□□□ -1.69
SHKBP1Q8TBC3 MIR135A2-201ENST00000384854 100 ntBASIC4.51□□□□□ -1.69
SHKBP1Q8TBC3 AL033519.2-201ENST00000403958 392 ntBASIC4.51□□□□□ -1.69
SHKBP1Q8TBC3 PPIAP31-201ENST00000405422 495 ntBASIC4.51□□□□□ -1.69
SHKBP1Q8TBC3 AL356095.1-201ENST00000417217 199 ntBASIC4.51□□□□□ -1.69
SHKBP1Q8TBC3 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.51□□□□□ -1.69
SHKBP1Q8TBC3 AL359073.1-201ENST00000448036 403 ntBASIC4.51□□□□□ -1.69
SHKBP1Q8TBC3 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.51□□□□□ -1.69
SHKBP1Q8TBC3 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.51□□□□□ -1.69
SHKBP1Q8TBC3 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.51□□□□□ -1.69
SHKBP1Q8TBC3 RNU1-86P-201ENST00000516108 154 ntBASIC4.51□□□□□ -1.69
SHKBP1Q8TBC3 RNU1-107P-201ENST00000516617 154 ntBASIC4.51□□□□□ -1.69
SHKBP1Q8TBC3 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.51□□□□□ -1.69
SHKBP1Q8TBC3 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.51□□□□□ -1.69
SHKBP1Q8TBC3 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.51□□□□□ -1.69
SHKBP1Q8TBC3 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC4.51□□□□□ -1.69
SHKBP1Q8TBC3 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC4.51□□□□□ -1.69
SHKBP1Q8TBC3 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.51□□□□□ -1.69
SHKBP1Q8TBC3 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.51□□□□□ -1.69
SHKBP1Q8TBC3 AC023824.2-201ENST00000566185 400 ntBASIC4.51□□□□□ -1.69
SHKBP1Q8TBC3 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.51□□□□□ -1.69
SHKBP1Q8TBC3 AC009314.1-201ENST00000603871 304 ntBASIC4.51□□□□□ -1.69
SHKBP1Q8TBC3 AL160290.3-201ENST00000604869 165 ntBASIC4.51□□□□□ -1.69
SHKBP1Q8TBC3 RMST_4.1-201ENST00000616886 107 ntBASIC4.51□□□□□ -1.69
SHKBP1Q8TBC3 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.51□□□□□ -1.69
SHKBP1Q8TBC3 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SHKBP1Q8TBC3 SCN1A-220ENST00000641603 12506 ntBASIC4.51□□□□□ -1.69
SHKBP1Q8TBC3 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
SHKBP1Q8TBC3 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.51□□□□□ -1.69
SHKBP1Q8TBC3 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
SHKBP1Q8TBC3 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SHKBP1Q8TBC3 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SHKBP1Q8TBC3 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SHKBP1Q8TBC3 AL606537.1-201ENST00000607258 2011 ntBASIC4.5□□□□□ -1.69
SHKBP1Q8TBC3 RNA5SP52-201ENST00000362448 134 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms