Protein–RNA interactions for Protein: Q8NI51

CTCFL, Transcriptional repressor CTCFL, humanhuman

Predicted RBP Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFLQ8NI51 AC008277.2-201ENST00000605196 797 ntBASIC3.21□□□□□ -1.9
CTCFLQ8NI51 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.21□□□□□ -1.9
CTCFLQ8NI51 AC079597.1-201ENST00000624306 508 ntBASIC3.21□□□□□ -1.9
CTCFLQ8NI51 AC099654.5-201ENST00000636479 350 ntBASIC3.21□□□□□ -1.9
CTCFLQ8NI51 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
CTCFLQ8NI51 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.21□□□□□ -1.9
CTCFLQ8NI51 AL138713.1-201ENST00000624026 2130 ntBASIC3.2□□□□□ -1.9
CTCFLQ8NI51 FAM35BP-202ENST00000497389 3337 ntBASIC3.2□□□□□ -1.9
CTCFLQ8NI51 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CTCFLQ8NI51 OR5J1P-201ENST00000313544 939 ntBASIC3.2□□□□□ -1.9
CTCFLQ8NI51 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CTCFLQ8NI51 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CTCFLQ8NI51 U3.26-201ENST00000391236 204 ntBASIC3.2□□□□□ -1.9
CTCFLQ8NI51 BX295541.1-201ENST00000417774 250 ntBASIC3.2□□□□□ -1.9
CTCFLQ8NI51 TIMM9P3-201ENST00000428659 274 ntBASIC3.2□□□□□ -1.9
CTCFLQ8NI51 MTCO2P11-201ENST00000431069 680 ntBASIC3.2□□□□□ -1.9
CTCFLQ8NI51 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.2□□□□□ -1.9
CTCFLQ8NI51 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.2□□□□□ -1.9
CTCFLQ8NI51 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.2□□□□□ -1.9
CTCFLQ8NI51 HMGN1P12-201ENST00000499125 195 ntBASIC3.2□□□□□ -1.9
CTCFLQ8NI51 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.2□□□□□ -1.9
CTCFLQ8NI51 RNU6-1282P-201ENST00000516735 96 ntBASIC3.2□□□□□ -1.9
CTCFLQ8NI51 HMGN1P28-201ENST00000521340 364 ntBASIC3.2□□□□□ -1.9
CTCFLQ8NI51 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.2□□□□□ -1.9
CTCFLQ8NI51 AP001893.2-201ENST00000526949 202 ntBASIC3.2□□□□□ -1.9
CTCFLQ8NI51 FAM92A1P1-201ENST00000528023 890 ntBASIC3.2□□□□□ -1.9
CTCFLQ8NI51 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC3.2□□□□□ -1.9
CTCFLQ8NI51 AC079600.2-201ENST00000550076 130 ntBASIC3.2□□□□□ -1.9
CTCFLQ8NI51 HMGB1P33-201ENST00000563485 527 ntBASIC3.2□□□□□ -1.9
CTCFLQ8NI51 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.2□□□□□ -1.9
CTCFLQ8NI51 AC106782.4-201ENST00000568264 210 ntBASIC3.2□□□□□ -1.9
CTCFLQ8NI51 AC138761.3-201ENST00000579993 334 ntBASIC3.2□□□□□ -1.9
CTCFLQ8NI51 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.2□□□□□ -1.9
CTCFLQ8NI51 AC060780.3-201ENST00000589464 80 ntBASIC3.2□□□□□ -1.9
CTCFLQ8NI51 AL359999.1-201ENST00000604513 294 ntBASIC3.2□□□□□ -1.9
CTCFLQ8NI51 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.2□□□□□ -1.9
CTCFLQ8NI51 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CTCFLQ8NI51 MTND4P12-201ENST00000498999 1377 ntBASIC3.2□□□□□ -1.9
CTCFLQ8NI51 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CTCFLQ8NI51 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.2□□□□□ -1.9
CTCFLQ8NI51 AC010680.1-201ENST00000590024 3590 ntBASIC3.19□□□□□ -1.9
CTCFLQ8NI51 Y_RNA.46-201ENST00000362695 102 ntBASIC3.19□□□□□ -1.9
CTCFLQ8NI51 Y_RNA.296-201ENST00000364930 108 ntBASIC3.19□□□□□ -1.9
CTCFLQ8NI51 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
CTCFLQ8NI51 RNU1-39P-201ENST00000383897 165 ntBASIC3.19□□□□□ -1.9
CTCFLQ8NI51 Y_RNA.402-201ENST00000383972 102 ntBASIC3.19□□□□□ -1.9
CTCFLQ8NI51 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CTCFLQ8NI51 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CTCFLQ8NI51 RNA5SP21-201ENST00000410917 96 ntBASIC3.19□□□□□ -1.9
CTCFLQ8NI51 MTND3P17-201ENST00000416968 344 ntBASIC3.19□□□□□ -1.9
CTCFLQ8NI51 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.19□□□□□ -1.9
CTCFLQ8NI51 AL589872.1-201ENST00000426602 288 ntBASIC3.19□□□□□ -1.9
CTCFLQ8NI51 RPL35AP22-201ENST00000436855 335 ntBASIC3.19□□□□□ -1.9
CTCFLQ8NI51 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.19□□□□□ -1.9
CTCFLQ8NI51 FAM103A2P-201ENST00000444122 354 ntBASIC3.19□□□□□ -1.9
CTCFLQ8NI51 FDX1P2-201ENST00000450769 375 ntBASIC3.19□□□□□ -1.9
CTCFLQ8NI51 MTND1P11-201ENST00000456661 876 ntBASIC3.19□□□□□ -1.9
CTCFLQ8NI51 RPS20P20-201ENST00000460498 340 ntBASIC3.19□□□□□ -1.9
CTCFLQ8NI51 AC135721.1-201ENST00000497954 479 ntBASIC3.19□□□□□ -1.9
CTCFLQ8NI51 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.19□□□□□ -1.9
CTCFLQ8NI51 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.19□□□□□ -1.9
CTCFLQ8NI51 RAC1P5-201ENST00000512182 576 ntBASIC3.19□□□□□ -1.9
CTCFLQ8NI51 RNU6-1153P-201ENST00000516760 105 ntBASIC3.19□□□□□ -1.9
CTCFLQ8NI51 RNU6-928P-201ENST00000516876 104 ntBASIC3.19□□□□□ -1.9
CTCFLQ8NI51 RNU6-840P-201ENST00000517275 65 ntBASIC3.19□□□□□ -1.9
CTCFLQ8NI51 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.19□□□□□ -1.9
CTCFLQ8NI51 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.19□□□□□ -1.9
CTCFLQ8NI51 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.19□□□□□ -1.9
CTCFLQ8NI51 AL355836.1-201ENST00000555951 870 ntBASIC3.19□□□□□ -1.9
CTCFLQ8NI51 GTF3AP2-201ENST00000557014 266 ntBASIC3.19□□□□□ -1.9
CTCFLQ8NI51 AL138976.2-201ENST00000563989 694 ntBASIC3.19□□□□□ -1.9
CTCFLQ8NI51 AL391840.1-201ENST00000571144 367 ntBASIC3.19□□□□□ -1.9
CTCFLQ8NI51 RPL23AP84-201ENST00000571193 464 ntBASIC3.19□□□□□ -1.9
CTCFLQ8NI51 MIR3682-201ENST00000581338 84 ntBASIC3.19□□□□□ -1.9
CTCFLQ8NI51 AC060771.1-201ENST00000582031 164 ntBASIC3.19□□□□□ -1.9
CTCFLQ8NI51 NRBF2P1-201ENST00000587407 859 ntBASIC3.19□□□□□ -1.9
CTCFLQ8NI51 AC008752.3-201ENST00000588113 712 ntBASIC3.19□□□□□ -1.9
CTCFLQ8NI51 AL391646.1-201ENST00000603860 190 ntBASIC3.19□□□□□ -1.9
CTCFLQ8NI51 AC005046.1-201ENST00000608515 625 ntBASIC3.19□□□□□ -1.9
CTCFLQ8NI51 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.19□□□□□ -1.9
CTCFLQ8NI51 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.19□□□□□ -1.9
CTCFLQ8NI51 AL049641.1-201ENST00000441055 1948 ntBASIC3.19□□□□□ -1.9
CTCFLQ8NI51 AC007785.2-201ENST00000598627 1916 ntBASIC3.19□□□□□ -1.9
CTCFLQ8NI51 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CTCFLQ8NI51 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.19□□□□□ -1.9
CTCFLQ8NI51 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.19□□□□□ -1.9
CTCFLQ8NI51 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CTCFLQ8NI51 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CTCFLQ8NI51 RNU1-112P-201ENST00000364401 164 ntBASIC3.18□□□□□ -1.9
CTCFLQ8NI51 Y_RNA.295-201ENST00000364918 102 ntBASIC3.18□□□□□ -1.9
CTCFLQ8NI51 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
CTCFLQ8NI51 Y_RNA.535-201ENST00000384612 99 ntBASIC3.18□□□□□ -1.9
CTCFLQ8NI51 AL512633.1-201ENST00000399931 655 ntBASIC3.18□□□□□ -1.9
CTCFLQ8NI51 RNU4-55P-201ENST00000410731 137 ntBASIC3.18□□□□□ -1.9
CTCFLQ8NI51 PIGFP2-201ENST00000421400 651 ntBASIC3.18□□□□□ -1.9
CTCFLQ8NI51 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
CTCFLQ8NI51 AL353777.1-201ENST00000425552 326 ntBASIC3.18□□□□□ -1.9
CTCFLQ8NI51 AL512844.2-201ENST00000433990 593 ntBASIC3.18□□□□□ -1.9
CTCFLQ8NI51 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.18□□□□□ -1.9
CTCFLQ8NI51 AL118496.2-201ENST00000448300 230 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms