Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.81□□□□□ -1.64
DEPDC4Q8N2C3 GPM6BP3-201ENST00000442797 145 ntBASIC4.81□□□□□ -1.64
DEPDC4Q8N2C3 BTF3P6-201ENST00000448054 499 ntBASIC4.81□□□□□ -1.64
DEPDC4Q8N2C3 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC4.81□□□□□ -1.64
DEPDC4Q8N2C3 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC4.81□□□□□ -1.64
DEPDC4Q8N2C3 COPS8P2-201ENST00000473228 627 ntBASIC4.81□□□□□ -1.64
DEPDC4Q8N2C3 AC117440.1-201ENST00000474107 571 ntBASIC4.81□□□□□ -1.64
DEPDC4Q8N2C3 AC093270.2-201ENST00000486157 792 ntBASIC4.81□□□□□ -1.64
DEPDC4Q8N2C3 RNU6-58P-201ENST00000517143 103 ntBASIC4.81□□□□□ -1.64
DEPDC4Q8N2C3 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.81□□□□□ -1.64
DEPDC4Q8N2C3 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
DEPDC4Q8N2C3 MIR3690-201ENST00000580266 75 ntBASIC4.81□□□□□ -1.64
DEPDC4Q8N2C3 DLEU2_6.2-201ENST00000620994 136 ntBASIC4.81□□□□□ -1.64
DEPDC4Q8N2C3 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.81□□□□□ -1.64
DEPDC4Q8N2C3 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
DEPDC4Q8N2C3 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
DEPDC4Q8N2C3 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
DEPDC4Q8N2C3 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.81□□□□□ -1.64
DEPDC4Q8N2C3 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
DEPDC4Q8N2C3 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC4.81□□□□□ -1.64
DEPDC4Q8N2C3 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
DEPDC4Q8N2C3 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.81□□□□□ -1.64
DEPDC4Q8N2C3 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
DEPDC4Q8N2C3 OR51H2P-202ENST00000641424 3046 ntBASIC4.8□□□□□ -1.64
DEPDC4Q8N2C3 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
DEPDC4Q8N2C3 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
DEPDC4Q8N2C3 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC4.8□□□□□ -1.64
DEPDC4Q8N2C3 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
DEPDC4Q8N2C3 RNU6-1159P-201ENST00000362933 107 ntBASIC4.8□□□□□ -1.64
DEPDC4Q8N2C3 RNA5SP197-201ENST00000363357 119 ntBASIC4.8□□□□□ -1.64
DEPDC4Q8N2C3 RNA5SP167-201ENST00000365461 116 ntBASIC4.8□□□□□ -1.64
DEPDC4Q8N2C3 RNU6-1035P-201ENST00000384477 107 ntBASIC4.8□□□□□ -1.64
DEPDC4Q8N2C3 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
DEPDC4Q8N2C3 FTH1P15-201ENST00000406984 280 ntBASIC4.8□□□□□ -1.64
DEPDC4Q8N2C3 RNA5SP129-201ENST00000410276 118 ntBASIC4.8□□□□□ -1.64
DEPDC4Q8N2C3 RPS26P42-201ENST00000413485 326 ntBASIC4.8□□□□□ -1.64
DEPDC4Q8N2C3 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC4.8□□□□□ -1.64
DEPDC4Q8N2C3 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC4.8□□□□□ -1.64
DEPDC4Q8N2C3 RPS4XP22-201ENST00000480755 780 ntBASIC4.8□□□□□ -1.64
DEPDC4Q8N2C3 AC020890.1-201ENST00000491837 504 ntBASIC4.8□□□□□ -1.64
DEPDC4Q8N2C3 AC073073.1-201ENST00000493920 463 ntBASIC4.8□□□□□ -1.64
DEPDC4Q8N2C3 RPS27AP10-201ENST00000496103 208 ntBASIC4.8□□□□□ -1.64
DEPDC4Q8N2C3 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
DEPDC4Q8N2C3 RNU6-567P-201ENST00000516746 107 ntBASIC4.8□□□□□ -1.64
DEPDC4Q8N2C3 RNU7-110P-201ENST00000516891 62 ntBASIC4.8□□□□□ -1.64
DEPDC4Q8N2C3 SNORA31.23-201ENST00000517219 133 ntBASIC4.8□□□□□ -1.64
DEPDC4Q8N2C3 AC024405.2-202ENST00000532731 184 ntBASIC4.8□□□□□ -1.64
DEPDC4Q8N2C3 AP004242.1-201ENST00000533701 349 ntBASIC4.8□□□□□ -1.64
DEPDC4Q8N2C3 HSPE1P4-201ENST00000550617 308 ntBASIC4.8□□□□□ -1.64
DEPDC4Q8N2C3 MIR4282-201ENST00000583613 67 ntBASIC4.8□□□□□ -1.64
DEPDC4Q8N2C3 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC4.8□□□□□ -1.64
DEPDC4Q8N2C3 MIR6748-201ENST00000610433 71 ntBASIC4.8□□□□□ -1.64
DEPDC4Q8N2C3 MIR3529-201ENST00000637713 78 ntBASIC4.8□□□□□ -1.64
DEPDC4Q8N2C3 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
DEPDC4Q8N2C3 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
DEPDC4Q8N2C3 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
DEPDC4Q8N2C3 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.8□□□□□ -1.64
DEPDC4Q8N2C3 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
DEPDC4Q8N2C3 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
DEPDC4Q8N2C3 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
DEPDC4Q8N2C3 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
DEPDC4Q8N2C3 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.79□□□□□ -1.64
DEPDC4Q8N2C3 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
DEPDC4Q8N2C3 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
DEPDC4Q8N2C3 SALL4P2-201ENST00000423288 2910 ntBASIC4.79□□□□□ -1.64
DEPDC4Q8N2C3 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.79□□□□□ -1.64
DEPDC4Q8N2C3 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
DEPDC4Q8N2C3 UBE2WP1-201ENST00000362030 340 ntBASIC4.79□□□□□ -1.64
DEPDC4Q8N2C3 SNORA25.1-201ENST00000362326 128 ntBASIC4.79□□□□□ -1.64
DEPDC4Q8N2C3 Y_RNA.275-201ENST00000364726 110 ntBASIC4.79□□□□□ -1.64
DEPDC4Q8N2C3 Y_RNA.286-201ENST00000364813 102 ntBASIC4.79□□□□□ -1.64
DEPDC4Q8N2C3 RNU1-140P-201ENST00000365040 165 ntBASIC4.79□□□□□ -1.64
DEPDC4Q8N2C3 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
DEPDC4Q8N2C3 MIR223-201ENST00000385204 110 ntBASIC4.79□□□□□ -1.64
DEPDC4Q8N2C3 RPL36AP10-201ENST00000421785 322 ntBASIC4.79□□□□□ -1.64
DEPDC4Q8N2C3 WARS2P1-201ENST00000429678 537 ntBASIC4.79□□□□□ -1.64
DEPDC4Q8N2C3 AC009238.2-201ENST00000431026 355 ntBASIC4.79□□□□□ -1.64
DEPDC4Q8N2C3 AC084357.1-201ENST00000473404 255 ntBASIC4.79□□□□□ -1.64
DEPDC4Q8N2C3 RN7SL826P-201ENST00000479724 288 ntBASIC4.79□□□□□ -1.64
DEPDC4Q8N2C3 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
DEPDC4Q8N2C3 AC107393.1-201ENST00000512403 346 ntBASIC4.79□□□□□ -1.64
DEPDC4Q8N2C3 Y_RNA.703-201ENST00000516846 111 ntBASIC4.79□□□□□ -1.64
DEPDC4Q8N2C3 RNA5SP54-201ENST00000516951 92 ntBASIC4.79□□□□□ -1.64
DEPDC4Q8N2C3 IGKV2D-19-201ENST00000523346 262 ntBASIC4.79□□□□□ -1.64
DEPDC4Q8N2C3 AC021231.3-201ENST00000558497 370 ntBASIC4.79□□□□□ -1.64
DEPDC4Q8N2C3 MIR5695-201ENST00000579717 85 ntBASIC4.79□□□□□ -1.64
DEPDC4Q8N2C3 AL451007.1-201ENST00000595491 289 ntBASIC4.79□□□□□ -1.64
DEPDC4Q8N2C3 IMMP1LP3-201ENST00000604197 224 ntBASIC4.79□□□□□ -1.64
DEPDC4Q8N2C3 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
DEPDC4Q8N2C3 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
DEPDC4Q8N2C3 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
DEPDC4Q8N2C3 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
DEPDC4Q8N2C3 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
DEPDC4Q8N2C3 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
DEPDC4Q8N2C3 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.78□□□□□ -1.64
DEPDC4Q8N2C3 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.78□□□□□ -1.64
DEPDC4Q8N2C3 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
DEPDC4Q8N2C3 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
DEPDC4Q8N2C3 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
DEPDC4Q8N2C3 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms