Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SYNE4Q8N205 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SYNE4Q8N205 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.04□□□□□ -1.76
SYNE4Q8N205 AL133412.1-201ENST00000380194 2992 ntBASIC4.04□□□□□ -1.76
SYNE4Q8N205 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SYNE4Q8N205 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SYNE4Q8N205 Y_RNA.148-201ENST00000363557 117 ntBASIC4.04□□□□□ -1.76
SYNE4Q8N205 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.04□□□□□ -1.76
SYNE4Q8N205 RNU6-26P-201ENST00000383985 107 ntBASIC4.04□□□□□ -1.76
SYNE4Q8N205 RNU6-639P-201ENST00000384074 107 ntBASIC4.04□□□□□ -1.76
SYNE4Q8N205 SNORA24.1-201ENST00000384401 135 ntBASIC4.04□□□□□ -1.76
SYNE4Q8N205 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SYNE4Q8N205 RNU2-29P-201ENST00000410423 189 ntBASIC4.04□□□□□ -1.76
SYNE4Q8N205 SKA2P1-201ENST00000425592 390 ntBASIC4.04□□□□□ -1.76
SYNE4Q8N205 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.04□□□□□ -1.76
SYNE4Q8N205 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC4.04□□□□□ -1.76
SYNE4Q8N205 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.04□□□□□ -1.76
SYNE4Q8N205 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.04□□□□□ -1.76
SYNE4Q8N205 AC091885.1-201ENST00000506658 268 ntBASIC4.04□□□□□ -1.76
SYNE4Q8N205 RNU6-566P-201ENST00000516790 107 ntBASIC4.04□□□□□ -1.76
SYNE4Q8N205 RNU6-64P-201ENST00000517119 105 ntBASIC4.04□□□□□ -1.76
SYNE4Q8N205 AC022634.1-201ENST00000520765 532 ntBASIC4.04□□□□□ -1.76
SYNE4Q8N205 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.04□□□□□ -1.76
SYNE4Q8N205 COX6CP5-201ENST00000527162 228 ntBASIC4.04□□□□□ -1.76
SYNE4Q8N205 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC4.04□□□□□ -1.76
SYNE4Q8N205 AP000857.1-201ENST00000532151 543 ntBASIC4.04□□□□□ -1.76
SYNE4Q8N205 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.04□□□□□ -1.76
SYNE4Q8N205 MDM2-233ENST00000545204 398 ntTSL 5 BASIC4.04□□□□□ -1.76
SYNE4Q8N205 CR383656.7-201ENST00000548164 174 ntBASIC4.04□□□□□ -1.76
SYNE4Q8N205 SNRPGP18-201ENST00000553000 214 ntBASIC4.04□□□□□ -1.76
SYNE4Q8N205 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.04□□□□□ -1.76
SYNE4Q8N205 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC4.04□□□□□ -1.76
SYNE4Q8N205 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.04□□□□□ -1.76
SYNE4Q8N205 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.04□□□□□ -1.76
SYNE4Q8N205 MIR3672-201ENST00000584290 82 ntBASIC4.04□□□□□ -1.76
SYNE4Q8N205 MIR4293-201ENST00000584305 78 ntBASIC4.04□□□□□ -1.76
SYNE4Q8N205 AC130324.3-201ENST00000614165 542 ntBASIC4.04□□□□□ -1.76
SYNE4Q8N205 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.04□□□□□ -1.76
SYNE4Q8N205 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SYNE4Q8N205 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
SYNE4Q8N205 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SYNE4Q8N205 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SYNE4Q8N205 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SYNE4Q8N205 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.03□□□□□ -1.76
SYNE4Q8N205 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
SYNE4Q8N205 CPD-202ENST00000543464 4007 ntTSL 2 BASIC4.03□□□□□ -1.76
SYNE4Q8N205 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.03□□□□□ -1.76
SYNE4Q8N205 RNU6-1188P-201ENST00000363795 107 ntBASIC4.03□□□□□ -1.76
SYNE4Q8N205 SNORD115-7-201ENST00000365306 82 ntBASIC4.03□□□□□ -1.76
SYNE4Q8N205 RNU6-61P-201ENST00000365528 109 ntBASIC4.03□□□□□ -1.76
SYNE4Q8N205 SNORA54-201ENST00000384281 123 ntBASIC4.03□□□□□ -1.76
SYNE4Q8N205 RNU6-505P-201ENST00000384427 107 ntBASIC4.03□□□□□ -1.76
SYNE4Q8N205 Y_RNA.576-201ENST00000384781 102 ntBASIC4.03□□□□□ -1.76
SYNE4Q8N205 AL136372.1-201ENST00000403060 228 ntBASIC4.03□□□□□ -1.76
SYNE4Q8N205 OR6C66P-201ENST00000414917 930 ntBASIC4.03□□□□□ -1.76
SYNE4Q8N205 AC002075.2-201ENST00000425207 252 ntBASIC4.03□□□□□ -1.76
SYNE4Q8N205 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC4.03□□□□□ -1.76
SYNE4Q8N205 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.03□□□□□ -1.76
SYNE4Q8N205 AC108059.3-201ENST00000456388 214 ntBASIC4.03□□□□□ -1.76
SYNE4Q8N205 MTND5P22-201ENST00000458380 195 ntBASIC4.03□□□□□ -1.76
SYNE4Q8N205 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SYNE4Q8N205 RPL23AP11-201ENST00000475260 469 ntBASIC4.03□□□□□ -1.76
SYNE4Q8N205 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
SYNE4Q8N205 AC026801.2-201ENST00000515352 425 ntBASIC4.03□□□□□ -1.76
SYNE4Q8N205 RN7SKP24-201ENST00000515888 284 ntBASIC4.03□□□□□ -1.76
SYNE4Q8N205 RNU7-51P-201ENST00000516560 62 ntBASIC4.03□□□□□ -1.76
SYNE4Q8N205 FAM60DP-201ENST00000524174 632 ntBASIC4.03□□□□□ -1.76
SYNE4Q8N205 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.03□□□□□ -1.76
SYNE4Q8N205 AP002404.1-201ENST00000532005 451 ntBASIC4.03□□□□□ -1.76
SYNE4Q8N205 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SYNE4Q8N205 MIR4503-201ENST00000582187 83 ntBASIC4.03□□□□□ -1.76
SYNE4Q8N205 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC4.03□□□□□ -1.76
SYNE4Q8N205 HMGB1P50-201ENST00000605814 607 ntBASIC4.03□□□□□ -1.76
SYNE4Q8N205 uc_338.1-201ENST00000612113 180 ntBASIC4.03□□□□□ -1.76
SYNE4Q8N205 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SYNE4Q8N205 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SYNE4Q8N205 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SYNE4Q8N205 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
SYNE4Q8N205 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
SYNE4Q8N205 AF117829.1-206ENST00000621883 3802 ntBASIC4.02□□□□□ -1.77
SYNE4Q8N205 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.02□□□□□ -1.77
SYNE4Q8N205 RNU6-1249P-201ENST00000363237 111 ntBASIC4.02□□□□□ -1.77
SYNE4Q8N205 RNU6-1078P-201ENST00000364522 103 ntBASIC4.02□□□□□ -1.77
SYNE4Q8N205 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SYNE4Q8N205 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
SYNE4Q8N205 AL583834.1-201ENST00000406943 343 ntBASIC4.02□□□□□ -1.77
SYNE4Q8N205 RNU6-712P-201ENST00000410558 100 ntBASIC4.02□□□□□ -1.77
SYNE4Q8N205 AL160004.2-201ENST00000432935 350 ntBASIC4.02□□□□□ -1.77
SYNE4Q8N205 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.02□□□□□ -1.77
SYNE4Q8N205 AC107399.1-201ENST00000451226 265 ntBASIC4.02□□□□□ -1.77
SYNE4Q8N205 SNRPFP3-201ENST00000457792 225 ntBASIC4.02□□□□□ -1.77
SYNE4Q8N205 MIR2053-201ENST00000459295 91 ntBASIC4.02□□□□□ -1.77
SYNE4Q8N205 Y_RNA.654-201ENST00000497848 106 ntBASIC4.02□□□□□ -1.77
SYNE4Q8N205 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC4.02□□□□□ -1.77
SYNE4Q8N205 Y_RNA.720-201ENST00000517166 92 ntBASIC4.02□□□□□ -1.77
SYNE4Q8N205 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SYNE4Q8N205 AC011979.2-201ENST00000527568 352 ntBASIC4.02□□□□□ -1.77
SYNE4Q8N205 AP000763.2-201ENST00000540641 163 ntBASIC4.02□□□□□ -1.77
SYNE4Q8N205 AC018630.1-201ENST00000541376 925 ntBASIC4.02□□□□□ -1.77
SYNE4Q8N205 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms