Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 AC107626.1-201ENST00000471084 183 ntBASIC2.72□□□□□ -1.97
CCDC83Q8IWF9 AC126389.1-201ENST00000477436 290 ntBASIC2.72□□□□□ -1.97
CCDC83Q8IWF9 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC2.72□□□□□ -1.97
CCDC83Q8IWF9 AC010486.2-201ENST00000505572 483 ntBASIC2.72□□□□□ -1.97
CCDC83Q8IWF9 RNU6-677P-201ENST00000516914 101 ntBASIC2.72□□□□□ -1.97
CCDC83Q8IWF9 RNU6-143P-201ENST00000516942 93 ntBASIC2.72□□□□□ -1.97
CCDC83Q8IWF9 RPL21P5-201ENST00000554662 472 ntBASIC2.72□□□□□ -1.97
CCDC83Q8IWF9 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.72□□□□□ -1.97
CCDC83Q8IWF9 HMGN1P30-201ENST00000589286 268 ntBASIC2.72□□□□□ -1.97
CCDC83Q8IWF9 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.72□□□□□ -1.97
CCDC83Q8IWF9 AC120349.3-201ENST00000624377 529 ntBASIC2.72□□□□□ -1.97
CCDC83Q8IWF9 AC007494.3-201ENST00000624660 743 ntBASIC2.72□□□□□ -1.97
CCDC83Q8IWF9 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
CCDC83Q8IWF9 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.72□□□□□ -1.97
CCDC83Q8IWF9 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.71□□□□□ -1.98
CCDC83Q8IWF9 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CCDC83Q8IWF9 NACAP2-201ENST00000318548 624 ntBASIC2.71□□□□□ -1.98
CCDC83Q8IWF9 RNU6-288P-201ENST00000363690 104 ntBASIC2.71□□□□□ -1.98
CCDC83Q8IWF9 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
CCDC83Q8IWF9 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC2.71□□□□□ -1.98
CCDC83Q8IWF9 AL589872.1-201ENST00000426602 288 ntBASIC2.71□□□□□ -1.98
CCDC83Q8IWF9 USP9YP15-201ENST00000442391 422 ntBASIC2.71□□□□□ -1.98
CCDC83Q8IWF9 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC2.71□□□□□ -1.98
CCDC83Q8IWF9 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC2.71□□□□□ -1.98
CCDC83Q8IWF9 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC2.71□□□□□ -1.98
CCDC83Q8IWF9 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC2.71□□□□□ -1.98
CCDC83Q8IWF9 AC098591.2-201ENST00000510152 315 ntBASIC2.71□□□□□ -1.98
CCDC83Q8IWF9 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.71□□□□□ -1.98
CCDC83Q8IWF9 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.71□□□□□ -1.98
CCDC83Q8IWF9 Y_RNA.672-201ENST00000516289 104 ntBASIC2.71□□□□□ -1.98
CCDC83Q8IWF9 RNU1-104P-201ENST00000517280 175 ntBASIC2.71□□□□□ -1.98
CCDC83Q8IWF9 AC109329.2-201ENST00000519658 482 ntBASIC2.71□□□□□ -1.98
CCDC83Q8IWF9 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.71□□□□□ -1.98
CCDC83Q8IWF9 AP003122.3-201ENST00000526316 255 ntBASIC2.71□□□□□ -1.98
CCDC83Q8IWF9 AC084851.1-201ENST00000529105 249 ntBASIC2.71□□□□□ -1.98
CCDC83Q8IWF9 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.71□□□□□ -1.98
CCDC83Q8IWF9 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.71□□□□□ -1.98
CCDC83Q8IWF9 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.71□□□□□ -1.98
CCDC83Q8IWF9 AP002360.4-201ENST00000606980 481 ntBASIC2.71□□□□□ -1.98
CCDC83Q8IWF9 AL451064.1-201ENST00000607718 471 ntBASIC2.71□□□□□ -1.98
CCDC83Q8IWF9 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
CCDC83Q8IWF9 MIR3199-2-201ENST00000636243 86 ntBASIC2.71□□□□□ -1.98
CCDC83Q8IWF9 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.71□□□□□ -1.98
CCDC83Q8IWF9 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CCDC83Q8IWF9 ANKRD20A17P-201ENST00000511745 1330 ntBASIC2.7□□□□□ -1.98
CCDC83Q8IWF9 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
CCDC83Q8IWF9 AC010889.1-201ENST00000566193 2666 ntBASIC2.7□□□□□ -1.98
CCDC83Q8IWF9 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.7□□□□□ -1.98
CCDC83Q8IWF9 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CCDC83Q8IWF9 RNU4-82P-201ENST00000362443 140 ntBASIC2.7□□□□□ -1.98
CCDC83Q8IWF9 SNORD56.2-201ENST00000363242 71 ntBASIC2.7□□□□□ -1.98
CCDC83Q8IWF9 Y_RNA.169-201ENST00000363745 96 ntBASIC2.7□□□□□ -1.98
CCDC83Q8IWF9 U3.12-201ENST00000364498 214 ntBASIC2.7□□□□□ -1.98
CCDC83Q8IWF9 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.7□□□□□ -1.98
CCDC83Q8IWF9 RNU6-946P-201ENST00000383878 107 ntBASIC2.7□□□□□ -1.98
CCDC83Q8IWF9 Y_RNA.534-201ENST00000384599 112 ntBASIC2.7□□□□□ -1.98
CCDC83Q8IWF9 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.7□□□□□ -1.98
CCDC83Q8IWF9 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.7□□□□□ -1.98
CCDC83Q8IWF9 RNU2-8P-201ENST00000410727 190 ntBASIC2.7□□□□□ -1.98
CCDC83Q8IWF9 RNA5SP508-201ENST00000411327 119 ntBASIC2.7□□□□□ -1.98
CCDC83Q8IWF9 AC093106.2-201ENST00000428212 385 ntBASIC2.7□□□□□ -1.98
CCDC83Q8IWF9 AL591212.2-201ENST00000433923 257 ntBASIC2.7□□□□□ -1.98
CCDC83Q8IWF9 AC018634.1-201ENST00000437554 401 ntBASIC2.7□□□□□ -1.98
CCDC83Q8IWF9 RPS15AP7-201ENST00000439294 405 ntBASIC2.7□□□□□ -1.98
CCDC83Q8IWF9 HMGN2P10-201ENST00000448085 265 ntBASIC2.7□□□□□ -1.98
CCDC83Q8IWF9 MTCO2P6-201ENST00000463134 685 ntBASIC2.7□□□□□ -1.98
CCDC83Q8IWF9 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.7□□□□□ -1.98
CCDC83Q8IWF9 AC139453.3-201ENST00000493276 369 ntBASIC2.7□□□□□ -1.98
CCDC83Q8IWF9 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2.7□□□□□ -1.98
CCDC83Q8IWF9 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.7□□□□□ -1.98
CCDC83Q8IWF9 SCARNA11.3-201ENST00000517276 130 ntBASIC2.7□□□□□ -1.98
CCDC83Q8IWF9 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.7□□□□□ -1.98
CCDC83Q8IWF9 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CCDC83Q8IWF9 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.7□□□□□ -1.98
CCDC83Q8IWF9 AL158211.1-201ENST00000566763 763 ntBASIC2.7□□□□□ -1.98
CCDC83Q8IWF9 MIR4298-201ENST00000584380 73 ntBASIC2.7□□□□□ -1.98
CCDC83Q8IWF9 AC011939.3-201ENST00000613686 466 ntBASIC2.7□□□□□ -1.98
CCDC83Q8IWF9 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.7□□□□□ -1.98
CCDC83Q8IWF9 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CCDC83Q8IWF9 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.69□□□□□ -1.98
CCDC83Q8IWF9 AC073343.1-201ENST00000328239 651 ntBASIC2.69□□□□□ -1.98
CCDC83Q8IWF9 RNU5E-1-201ENST00000362477 120 ntBASIC2.69□□□□□ -1.98
CCDC83Q8IWF9 SNORA67.1-201ENST00000364749 141 ntBASIC2.69□□□□□ -1.98
CCDC83Q8IWF9 RNU6-658P-201ENST00000384606 106 ntBASIC2.69□□□□□ -1.98
CCDC83Q8IWF9 RPL23AP32-201ENST00000395315 459 ntBASIC2.69□□□□□ -1.98
CCDC83Q8IWF9 RPS4XP7-201ENST00000406274 780 ntBASIC2.69□□□□□ -1.98
CCDC83Q8IWF9 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.69□□□□□ -1.98
CCDC83Q8IWF9 CYCSP46-201ENST00000423569 204 ntBASIC2.69□□□□□ -1.98
CCDC83Q8IWF9 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.69□□□□□ -1.98
CCDC83Q8IWF9 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.69□□□□□ -1.98
CCDC83Q8IWF9 AL591704.1-201ENST00000432574 275 ntBASIC2.69□□□□□ -1.98
CCDC83Q8IWF9 PGBD4P3-201ENST00000440731 581 ntBASIC2.69□□□□□ -1.98
CCDC83Q8IWF9 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC2.69□□□□□ -1.98
CCDC83Q8IWF9 BRK1P2-201ENST00000442875 223 ntBASIC2.69□□□□□ -1.98
CCDC83Q8IWF9 OSTCP8-201ENST00000445117 448 ntBASIC2.69□□□□□ -1.98
CCDC83Q8IWF9 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.69□□□□□ -1.98
CCDC83Q8IWF9 TRBV1-201ENST00000476502 284 ntBASIC2.69□□□□□ -1.98
CCDC83Q8IWF9 AC007182.2-201ENST00000489251 402 ntBASIC2.69□□□□□ -1.98
CCDC83Q8IWF9 AC098862.1-201ENST00000504991 413 ntBASIC2.69□□□□□ -1.98
CCDC83Q8IWF9 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 130.8 ms