Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
SH3RF1Q7Z6J0 AC126323.6-202ENST00000568092 3511 ntBASIC5.32□□□□□ -1.56
SH3RF1Q7Z6J0 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SH3RF1Q7Z6J0 RNU6-173P-201ENST00000364215 104 ntBASIC5.32□□□□□ -1.56
SH3RF1Q7Z6J0 RNU6-968P-201ENST00000384076 107 ntBASIC5.32□□□□□ -1.56
SH3RF1Q7Z6J0 RNU6-17P-201ENST00000384245 107 ntBASIC5.32□□□□□ -1.56
SH3RF1Q7Z6J0 RNU6-1289P-201ENST00000384431 106 ntBASIC5.32□□□□□ -1.56
SH3RF1Q7Z6J0 RNU6-18P-201ENST00000384527 107 ntBASIC5.32□□□□□ -1.56
SH3RF1Q7Z6J0 RPS4XP3-201ENST00000398541 413 ntBASIC5.32□□□□□ -1.56
SH3RF1Q7Z6J0 AL390729.2-201ENST00000416137 156 ntBASIC5.32□□□□□ -1.56
SH3RF1Q7Z6J0 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC5.32□□□□□ -1.56
SH3RF1Q7Z6J0 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.32□□□□□ -1.56
SH3RF1Q7Z6J0 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC5.32□□□□□ -1.56
SH3RF1Q7Z6J0 SNORA84-201ENST00000459229 133 ntBASIC5.32□□□□□ -1.56
SH3RF1Q7Z6J0 AC114982.1-201ENST00000469402 321 ntBASIC5.32□□□□□ -1.56
SH3RF1Q7Z6J0 YWHAEP4-201ENST00000505390 198 ntBASIC5.32□□□□□ -1.56
SH3RF1Q7Z6J0 AP005660.1-201ENST00000522972 293 ntBASIC5.32□□□□□ -1.56
SH3RF1Q7Z6J0 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.32□□□□□ -1.56
SH3RF1Q7Z6J0 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC5.32□□□□□ -1.56
SH3RF1Q7Z6J0 AL353748.2-201ENST00000622148 471 ntBASIC5.32□□□□□ -1.56
SH3RF1Q7Z6J0 SCARNA4-201ENST00000629045 128 ntBASIC5.32□□□□□ -1.56
SH3RF1Q7Z6J0 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.32□□□□□ -1.56
SH3RF1Q7Z6J0 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SH3RF1Q7Z6J0 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
SH3RF1Q7Z6J0 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
SH3RF1Q7Z6J0 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SH3RF1Q7Z6J0 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC5.31□□□□□ -1.56
SH3RF1Q7Z6J0 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SH3RF1Q7Z6J0 RNU6-336P-201ENST00000364891 107 ntBASIC5.31□□□□□ -1.56
SH3RF1Q7Z6J0 RNU1-64P-201ENST00000365443 163 ntBASIC5.31□□□□□ -1.56
SH3RF1Q7Z6J0 MIR514A1-201ENST00000385133 98 ntBASIC5.31□□□□□ -1.56
SH3RF1Q7Z6J0 SNORD12B-201ENST00000410433 91 ntBASIC5.31□□□□□ -1.56
SH3RF1Q7Z6J0 AC007560.1-201ENST00000426912 237 ntBASIC5.31□□□□□ -1.56
SH3RF1Q7Z6J0 AL353705.4-201ENST00000449661 238 ntBASIC5.31□□□□□ -1.56
SH3RF1Q7Z6J0 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC5.31□□□□□ -1.56
SH3RF1Q7Z6J0 AC073901.1-201ENST00000462471 408 ntBASIC5.31□□□□□ -1.56
SH3RF1Q7Z6J0 AP001025.1-201ENST00000486139 332 ntBASIC5.31□□□□□ -1.56
SH3RF1Q7Z6J0 AC091959.1-201ENST00000495857 238 ntBASIC5.31□□□□□ -1.56
SH3RF1Q7Z6J0 AC091868.1-201ENST00000508746 304 ntBASIC5.31□□□□□ -1.56
SH3RF1Q7Z6J0 RNU6-1219P-201ENST00000516143 112 ntBASIC5.31□□□□□ -1.56
SH3RF1Q7Z6J0 AP001781.1-201ENST00000530977 207 ntBASIC5.31□□□□□ -1.56
SH3RF1Q7Z6J0 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC5.31□□□□□ -1.56
SH3RF1Q7Z6J0 AC105129.1-201ENST00000560250 297 ntBASIC5.31□□□□□ -1.56
SH3RF1Q7Z6J0 RMST_6.1-201ENST00000611980 203 ntBASIC5.31□□□□□ -1.56
SH3RF1Q7Z6J0 ZYXP1-201ENST00000617638 118 ntBASIC5.31□□□□□ -1.56
SH3RF1Q7Z6J0 AC009541.1-201ENST00000438279 2662 ntBASIC5.31□□□□□ -1.56
SH3RF1Q7Z6J0 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.31□□□□□ -1.56
SH3RF1Q7Z6J0 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.31□□□□□ -1.56
SH3RF1Q7Z6J0 AC116096.1-201ENST00000566804 2314 ntBASIC5.31□□□□□ -1.56
SH3RF1Q7Z6J0 RAD17P1-201ENST00000418130 2042 ntBASIC5.31□□□□□ -1.56
SH3RF1Q7Z6J0 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
SH3RF1Q7Z6J0 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
SH3RF1Q7Z6J0 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.31□□□□□ -1.56
SH3RF1Q7Z6J0 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SH3RF1Q7Z6J0 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
SH3RF1Q7Z6J0 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SH3RF1Q7Z6J0 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
SH3RF1Q7Z6J0 Y_RNA.245-201ENST00000364493 95 ntBASIC5.3□□□□□ -1.56
SH3RF1Q7Z6J0 SNORD116-18-201ENST00000383961 92 ntBASIC5.3□□□□□ -1.56
SH3RF1Q7Z6J0 SNORD96B-201ENST00000386148 79 ntBASIC5.3□□□□□ -1.56
SH3RF1Q7Z6J0 CYP4F29P-201ENST00000420685 446 ntBASIC5.3□□□□□ -1.56
SH3RF1Q7Z6J0 MTCO1P39-201ENST00000426148 480 ntBASIC5.3□□□□□ -1.56
SH3RF1Q7Z6J0 FABP5P15-201ENST00000453566 214 ntBASIC5.3□□□□□ -1.56
SH3RF1Q7Z6J0 FPGT-203ENST00000467578 601 ntTSL 2 BASIC5.3□□□□□ -1.56
SH3RF1Q7Z6J0 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC5.3□□□□□ -1.56
SH3RF1Q7Z6J0 ENSA-210ENST00000503241 574 ntTSL 3 BASIC5.3□□□□□ -1.56
SH3RF1Q7Z6J0 SNORA27.4-201ENST00000516650 95 ntBASIC5.3□□□□□ -1.56
SH3RF1Q7Z6J0 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.3□□□□□ -1.56
SH3RF1Q7Z6J0 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC5.3□□□□□ -1.56
SH3RF1Q7Z6J0 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC5.3□□□□□ -1.56
SH3RF1Q7Z6J0 AC005086.4-201ENST00000623065 213 ntBASIC5.3□□□□□ -1.56
SH3RF1Q7Z6J0 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC5.3□□□□□ -1.56
SH3RF1Q7Z6J0 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SH3RF1Q7Z6J0 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC5.3□□□□□ -1.56
SH3RF1Q7Z6J0 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
SH3RF1Q7Z6J0 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.29□□□□□ -1.56
SH3RF1Q7Z6J0 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SH3RF1Q7Z6J0 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SH3RF1Q7Z6J0 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.29□□□□□ -1.56
SH3RF1Q7Z6J0 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.29□□□□□ -1.56
SH3RF1Q7Z6J0 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SH3RF1Q7Z6J0 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.29□□□□□ -1.56
SH3RF1Q7Z6J0 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SH3RF1Q7Z6J0 MIR410-201ENST00000362222 80 ntBASIC5.29□□□□□ -1.56
SH3RF1Q7Z6J0 RNU6-1130P-201ENST00000365434 107 ntBASIC5.29□□□□□ -1.56
SH3RF1Q7Z6J0 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC5.29□□□□□ -1.56
SH3RF1Q7Z6J0 PTMAP3-201ENST00000447474 330 ntBASIC5.29□□□□□ -1.56
SH3RF1Q7Z6J0 AC117440.1-201ENST00000474107 571 ntBASIC5.29□□□□□ -1.56
SH3RF1Q7Z6J0 AL160314.1-201ENST00000490836 438 ntBASIC5.29□□□□□ -1.56
SH3RF1Q7Z6J0 AC020593.1-201ENST00000507399 299 ntBASIC5.29□□□□□ -1.56
SH3RF1Q7Z6J0 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.29□□□□□ -1.56
SH3RF1Q7Z6J0 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC5.29□□□□□ -1.56
SH3RF1Q7Z6J0 RNY3P16-201ENST00000516338 101 ntBASIC5.29□□□□□ -1.56
SH3RF1Q7Z6J0 FTH1P11-201ENST00000517577 551 ntBASIC5.29□□□□□ -1.56
SH3RF1Q7Z6J0 IGKV3OR22-2-201ENST00000517943 313 ntBASIC5.29□□□□□ -1.56
SH3RF1Q7Z6J0 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
SH3RF1Q7Z6J0 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC5.29□□□□□ -1.56
SH3RF1Q7Z6J0 MIR4429-201ENST00000580105 73 ntBASIC5.29□□□□□ -1.56
SH3RF1Q7Z6J0 AC010928.2-201ENST00000588017 287 ntBASIC5.29□□□□□ -1.56
SH3RF1Q7Z6J0 ARF4P1-201ENST00000605447 541 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms