Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 RN7SL442P-201ENST00000473804 320 ntBASIC3.12□□□□□ -1.91
TMEM88Q6PEY1 AC084198.1-201ENST00000477747 402 ntBASIC3.12□□□□□ -1.91
TMEM88Q6PEY1 HMGN1P11-201ENST00000508668 303 ntBASIC3.12□□□□□ -1.91
TMEM88Q6PEY1 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.12□□□□□ -1.91
TMEM88Q6PEY1 AC092436.3-201ENST00000511788 257 ntBASIC3.12□□□□□ -1.91
TMEM88Q6PEY1 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.12□□□□□ -1.91
TMEM88Q6PEY1 AC010265.1-201ENST00000513509 211 ntBASIC3.12□□□□□ -1.91
TMEM88Q6PEY1 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.12□□□□□ -1.91
TMEM88Q6PEY1 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
TMEM88Q6PEY1 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.12□□□□□ -1.91
TMEM88Q6PEY1 LINC00933-203ENST00000559812 219 ntBASIC3.12□□□□□ -1.91
TMEM88Q6PEY1 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.12□□□□□ -1.91
TMEM88Q6PEY1 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.12□□□□□ -1.91
TMEM88Q6PEY1 AC020895.1-201ENST00000595362 272 ntBASIC3.12□□□□□ -1.91
TMEM88Q6PEY1 AL451007.1-201ENST00000595491 289 ntBASIC3.12□□□□□ -1.91
TMEM88Q6PEY1 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.12□□□□□ -1.91
TMEM88Q6PEY1 AC008121.1-201ENST00000603244 268 ntBASIC3.12□□□□□ -1.91
TMEM88Q6PEY1 ELOCP5-201ENST00000604924 333 ntBASIC3.12□□□□□ -1.91
TMEM88Q6PEY1 AC011890.2-201ENST00000613393 294 ntBASIC3.12□□□□□ -1.91
TMEM88Q6PEY1 AC011944.2-201ENST00000624440 683 ntBASIC3.12□□□□□ -1.91
TMEM88Q6PEY1 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.12□□□□□ -1.91
TMEM88Q6PEY1 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
TMEM88Q6PEY1 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.12□□□□□ -1.91
TMEM88Q6PEY1 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.12□□□□□ -1.91
TMEM88Q6PEY1 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
TMEM88Q6PEY1 PWAR6-201ENST00000552334 4618 ntBASIC3.12□□□□□ -1.91
TMEM88Q6PEY1 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.12□□□□□ -1.91
TMEM88Q6PEY1 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
TMEM88Q6PEY1 ZNF519P1-201ENST00000449011 1626 ntBASIC3.11□□□□□ -1.91
TMEM88Q6PEY1 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
TMEM88Q6PEY1 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.11□□□□□ -1.91
TMEM88Q6PEY1 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.11□□□□□ -1.91
TMEM88Q6PEY1 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.11□□□□□ -1.91
TMEM88Q6PEY1 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
TMEM88Q6PEY1 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.11□□□□□ -1.91
TMEM88Q6PEY1 MTND5P7-201ENST00000413558 1798 ntBASIC3.11□□□□□ -1.91
TMEM88Q6PEY1 OR5P1P-201ENST00000299512 925 ntBASIC3.11□□□□□ -1.91
TMEM88Q6PEY1 RNU6-562P-201ENST00000362731 107 ntBASIC3.11□□□□□ -1.91
TMEM88Q6PEY1 Y_RNA.58-201ENST00000362807 102 ntBASIC3.11□□□□□ -1.91
TMEM88Q6PEY1 Y_RNA.154-201ENST00000363624 102 ntBASIC3.11□□□□□ -1.91
TMEM88Q6PEY1 RNA5SP175-201ENST00000364275 119 ntBASIC3.11□□□□□ -1.91
TMEM88Q6PEY1 RNU6-283P-201ENST00000364788 107 ntBASIC3.11□□□□□ -1.91
TMEM88Q6PEY1 RNY3P1-201ENST00000365085 102 ntBASIC3.11□□□□□ -1.91
TMEM88Q6PEY1 RNY3-201ENST00000365484 102 ntBASIC3.11□□□□□ -1.91
TMEM88Q6PEY1 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
TMEM88Q6PEY1 RNU6-214P-201ENST00000384130 107 ntBASIC3.11□□□□□ -1.91
TMEM88Q6PEY1 Y_RNA.490-201ENST00000384413 102 ntBASIC3.11□□□□□ -1.91
TMEM88Q6PEY1 RNA5SP31-201ENST00000411144 127 ntBASIC3.11□□□□□ -1.91
TMEM88Q6PEY1 NDUFS5P4-201ENST00000412983 318 ntBASIC3.11□□□□□ -1.91
TMEM88Q6PEY1 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.11□□□□□ -1.91
TMEM88Q6PEY1 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
TMEM88Q6PEY1 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.11□□□□□ -1.91
TMEM88Q6PEY1 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.11□□□□□ -1.91
TMEM88Q6PEY1 BTF3P15-201ENST00000455606 336 ntBASIC3.11□□□□□ -1.91
TMEM88Q6PEY1 RPS27P29-201ENST00000463110 252 ntBASIC3.11□□□□□ -1.91
TMEM88Q6PEY1 RN7SL303P-201ENST00000469773 251 ntBASIC3.11□□□□□ -1.91
TMEM88Q6PEY1 RPS29P19-201ENST00000479709 171 ntBASIC3.11□□□□□ -1.91
TMEM88Q6PEY1 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.11□□□□□ -1.91
TMEM88Q6PEY1 TRBV12-2-201ENST00000489763 344 ntBASIC3.11□□□□□ -1.91
TMEM88Q6PEY1 AC108043.1-201ENST00000512696 574 ntBASIC3.11□□□□□ -1.91
TMEM88Q6PEY1 RNU6-581P-201ENST00000516214 105 ntBASIC3.11□□□□□ -1.91
TMEM88Q6PEY1 RNU6-277P-201ENST00000516272 106 ntBASIC3.11□□□□□ -1.91
TMEM88Q6PEY1 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.11□□□□□ -1.91
TMEM88Q6PEY1 AC026371.1-201ENST00000551867 419 ntBASIC3.11□□□□□ -1.91
TMEM88Q6PEY1 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
TMEM88Q6PEY1 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.11□□□□□ -1.91
TMEM88Q6PEY1 AL355375.2-201ENST00000574825 175 ntBASIC3.11□□□□□ -1.91
TMEM88Q6PEY1 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.11□□□□□ -1.91
TMEM88Q6PEY1 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.11□□□□□ -1.91
TMEM88Q6PEY1 IPO5P1-202ENST00000600039 287 ntBASIC3.11□□□□□ -1.91
TMEM88Q6PEY1 AC245389.1-201ENST00000605141 529 ntBASIC3.11□□□□□ -1.91
TMEM88Q6PEY1 ARF4P1-201ENST00000605447 541 ntBASIC3.11□□□□□ -1.91
TMEM88Q6PEY1 AC087045.1-201ENST00000605856 382 ntBASIC3.11□□□□□ -1.91
TMEM88Q6PEY1 AC064836.2-201ENST00000609491 462 ntBASIC3.11□□□□□ -1.91
TMEM88Q6PEY1 AC083809.1-201ENST00000615051 472 ntBASIC3.11□□□□□ -1.91
TMEM88Q6PEY1 AL731566.2-201ENST00000618971 317 ntBASIC3.11□□□□□ -1.91
TMEM88Q6PEY1 MIR6830-201ENST00000636015 70 ntBASIC3.11□□□□□ -1.91
TMEM88Q6PEY1 AC008013.2-202ENST00000637965 364 ntBASIC3.11□□□□□ -1.91
TMEM88Q6PEY1 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
TMEM88Q6PEY1 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.11□□□□□ -1.91
TMEM88Q6PEY1 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
TMEM88Q6PEY1 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
TMEM88Q6PEY1 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
TMEM88Q6PEY1 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
TMEM88Q6PEY1 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
TMEM88Q6PEY1 AL445529.1-201ENST00000398713 389 ntBASIC3.1□□□□□ -1.91
TMEM88Q6PEY1 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.1□□□□□ -1.91
TMEM88Q6PEY1 RNU6-1304P-201ENST00000411374 106 ntBASIC3.1□□□□□ -1.91
TMEM88Q6PEY1 BPY2DP-201ENST00000422208 265 ntBASIC3.1□□□□□ -1.91
TMEM88Q6PEY1 RPS29P17-201ENST00000430795 166 ntBASIC3.1□□□□□ -1.91
TMEM88Q6PEY1 AL159987.2-201ENST00000432754 307 ntBASIC3.1□□□□□ -1.91
TMEM88Q6PEY1 AC010401.1-201ENST00000463867 348 ntBASIC3.1□□□□□ -1.91
TMEM88Q6PEY1 AC128713.1-201ENST00000471495 306 ntBASIC3.1□□□□□ -1.91
TMEM88Q6PEY1 AC079140.5-201ENST00000507882 310 ntBASIC3.1□□□□□ -1.91
TMEM88Q6PEY1 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.1□□□□□ -1.91
TMEM88Q6PEY1 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.1□□□□□ -1.91
TMEM88Q6PEY1 RN7SKP24-201ENST00000515888 284 ntBASIC3.1□□□□□ -1.91
TMEM88Q6PEY1 Y_RNA.691-201ENST00000516611 103 ntBASIC3.1□□□□□ -1.91
TMEM88Q6PEY1 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
TMEM88Q6PEY1 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms