Protein–RNA interactions for Protein: Q6NX49

ZNF544, Zinc finger protein 544, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544Q6NX49 AC108078.1-201ENST00000508073 725 ntBASIC2.35□□□□□ -2.03
ZNF544Q6NX49 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.35□□□□□ -2.03
ZNF544Q6NX49 AL359273.1-201ENST00000510918 627 ntBASIC2.35□□□□□ -2.03
ZNF544Q6NX49 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.35□□□□□ -2.03
ZNF544Q6NX49 AC096725.1-201ENST00000514266 313 ntBASIC2.35□□□□□ -2.03
ZNF544Q6NX49 SCARNA15.2-201ENST00000516409 127 ntBASIC2.35□□□□□ -2.03
ZNF544Q6NX49 RNA5SP82-201ENST00000516707 92 ntBASIC2.35□□□□□ -2.03
ZNF544Q6NX49 AC090572.1-201ENST00000519251 160 ntBASIC2.35□□□□□ -2.03
ZNF544Q6NX49 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.35□□□□□ -2.03
ZNF544Q6NX49 AP003392.2-201ENST00000527269 208 ntBASIC2.35□□□□□ -2.03
ZNF544Q6NX49 AC022880.1-201ENST00000534017 973 ntBASIC2.35□□□□□ -2.03
ZNF544Q6NX49 AC093012.1-202ENST00000549403 582 ntBASIC2.35□□□□□ -2.03
ZNF544Q6NX49 AC087883.1-201ENST00000551882 391 ntBASIC2.35□□□□□ -2.03
ZNF544Q6NX49 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.35□□□□□ -2.03
ZNF544Q6NX49 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.35□□□□□ -2.03
ZNF544Q6NX49 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.35□□□□□ -2.03
ZNF544Q6NX49 AP005205.1-201ENST00000563503 508 ntBASIC2.35□□□□□ -2.03
ZNF544Q6NX49 AL391840.1-201ENST00000571144 367 ntBASIC2.35□□□□□ -2.03
ZNF544Q6NX49 AC005951.2-201ENST00000576282 495 ntBASIC2.35□□□□□ -2.03
ZNF544Q6NX49 AF038458.1-201ENST00000588406 262 ntBASIC2.35□□□□□ -2.03
ZNF544Q6NX49 AC073648.5-201ENST00000603502 305 ntBASIC2.35□□□□□ -2.03
ZNF544Q6NX49 AL645944.1-201ENST00000603857 493 ntBASIC2.35□□□□□ -2.03
ZNF544Q6NX49 AP002826.1-201ENST00000608835 315 ntBASIC2.35□□□□□ -2.03
ZNF544Q6NX49 AC008498.1-201ENST00000613012 531 ntBASIC2.35□□□□□ -2.03
ZNF544Q6NX49 SDR42E1P2-201ENST00000614861 481 ntBASIC2.35□□□□□ -2.03
ZNF544Q6NX49 AC010133.1-201ENST00000615809 842 ntBASIC2.35□□□□□ -2.03
ZNF544Q6NX49 AC090132.2-201ENST00000615881 347 ntBASIC2.35□□□□□ -2.03
ZNF544Q6NX49 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.35□□□□□ -2.03
ZNF544Q6NX49 AC006338.1-201ENST00000618453 749 ntBASIC2.35□□□□□ -2.03
ZNF544Q6NX49 AC005858.4-201ENST00000623191 700 ntBASIC2.35□□□□□ -2.03
ZNF544Q6NX49 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.35□□□□□ -2.03
ZNF544Q6NX49 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
ZNF544Q6NX49 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.34□□□□□ -2.03
ZNF544Q6NX49 RNU6-108P-201ENST00000365558 107 ntBASIC2.34□□□□□ -2.03
ZNF544Q6NX49 RNU5E-6P-201ENST00000365574 115 ntBASIC2.34□□□□□ -2.03
ZNF544Q6NX49 RNU1-39P-201ENST00000383897 165 ntBASIC2.34□□□□□ -2.03
ZNF544Q6NX49 Y_RNA.517-201ENST00000384551 106 ntBASIC2.34□□□□□ -2.03
ZNF544Q6NX49 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
ZNF544Q6NX49 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
ZNF544Q6NX49 AC127391.1-201ENST00000411737 98 ntBASIC2.34□□□□□ -2.03
ZNF544Q6NX49 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.34□□□□□ -2.03
ZNF544Q6NX49 USP9YP27-201ENST00000418455 438 ntBASIC2.34□□□□□ -2.03
ZNF544Q6NX49 AL451054.2-201ENST00000420896 202 ntBASIC2.34□□□□□ -2.03
ZNF544Q6NX49 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.34□□□□□ -2.03
ZNF544Q6NX49 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.34□□□□□ -2.03
ZNF544Q6NX49 AC007283.2-201ENST00000424739 197 ntBASIC2.34□□□□□ -2.03
ZNF544Q6NX49 AC008850.1-201ENST00000427546 362 ntBASIC2.34□□□□□ -2.03
ZNF544Q6NX49 RPL31P35-201ENST00000431058 377 ntBASIC2.34□□□□□ -2.03
ZNF544Q6NX49 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.34□□□□□ -2.03
ZNF544Q6NX49 HMGB3P12-201ENST00000438745 556 ntBASIC2.34□□□□□ -2.03
ZNF544Q6NX49 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.34□□□□□ -2.03
ZNF544Q6NX49 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
ZNF544Q6NX49 AC132479.1-201ENST00000449160 144 ntBASIC2.34□□□□□ -2.03
ZNF544Q6NX49 AL049714.1-201ENST00000466686 347 ntBASIC2.34□□□□□ -2.03
ZNF544Q6NX49 RPL23AP70-201ENST00000483361 460 ntBASIC2.34□□□□□ -2.03
ZNF544Q6NX49 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.34□□□□□ -2.03
ZNF544Q6NX49 HMGB1P29-201ENST00000505659 499 ntBASIC2.34□□□□□ -2.03
ZNF544Q6NX49 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.34□□□□□ -2.03
ZNF544Q6NX49 AC010486.1-201ENST00000511793 424 ntBASIC2.34□□□□□ -2.03
ZNF544Q6NX49 SNORA31.3-201ENST00000516029 96 ntBASIC2.34□□□□□ -2.03
ZNF544Q6NX49 RN7SKP258-201ENST00000517151 304 ntBASIC2.34□□□□□ -2.03
ZNF544Q6NX49 RNU1-104P-201ENST00000517280 175 ntBASIC2.34□□□□□ -2.03
ZNF544Q6NX49 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.34□□□□□ -2.03
ZNF544Q6NX49 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.34□□□□□ -2.03
ZNF544Q6NX49 AP001804.3-201ENST00000525146 880 ntBASIC2.34□□□□□ -2.03
ZNF544Q6NX49 OR5BN1P-201ENST00000532955 829 ntBASIC2.34□□□□□ -2.03
ZNF544Q6NX49 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
ZNF544Q6NX49 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.34□□□□□ -2.03
ZNF544Q6NX49 ARL2BPP2-201ENST00000550907 489 ntBASIC2.34□□□□□ -2.03
ZNF544Q6NX49 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.34□□□□□ -2.03
ZNF544Q6NX49 RPL23AP84-201ENST00000571193 464 ntBASIC2.34□□□□□ -2.03
ZNF544Q6NX49 AC103810.1-201ENST00000579873 453 ntBASIC2.34□□□□□ -2.03
ZNF544Q6NX49 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.34□□□□□ -2.03
ZNF544Q6NX49 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.34□□□□□ -2.03
ZNF544Q6NX49 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.34□□□□□ -2.03
ZNF544Q6NX49 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC2.34□□□□□ -2.03
ZNF544Q6NX49 AL133173.2-201ENST00000614270 90 ntBASIC2.34□□□□□ -2.03
ZNF544Q6NX49 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
ZNF544Q6NX49 AC008568.2-201ENST00000623862 2313 ntBASIC2.34□□□□□ -2.04
ZNF544Q6NX49 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
ZNF544Q6NX49 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
ZNF544Q6NX49 AC007336.1-201ENST00000576365 3828 ntBASIC2.33□□□□□ -2.04
ZNF544Q6NX49 Y_RNA.41-201ENST00000362646 102 ntBASIC2.33□□□□□ -2.04
ZNF544Q6NX49 RNU6-960P-201ENST00000364056 120 ntBASIC2.33□□□□□ -2.04
ZNF544Q6NX49 RNU1-112P-201ENST00000364401 164 ntBASIC2.33□□□□□ -2.04
ZNF544Q6NX49 RN7SKP226-201ENST00000364912 300 ntBASIC2.33□□□□□ -2.04
ZNF544Q6NX49 SET-203ENST00000372688 801 ntTSL 2 BASIC2.33□□□□□ -2.04
ZNF544Q6NX49 MIR558-201ENST00000384920 94 ntBASIC2.33□□□□□ -2.04
ZNF544Q6NX49 MIR34A-201ENST00000385130 110 ntBASIC2.33□□□□□ -2.04
ZNF544Q6NX49 RNA5SP210-201ENST00000391034 120 ntBASIC2.33□□□□□ -2.04
ZNF544Q6NX49 RPS4XP7-201ENST00000406274 780 ntBASIC2.33□□□□□ -2.04
ZNF544Q6NX49 U3.37-201ENST00000408528 213 ntBASIC2.33□□□□□ -2.04
ZNF544Q6NX49 AL513331.1-201ENST00000411908 397 ntBASIC2.33□□□□□ -2.04
ZNF544Q6NX49 BX295541.1-201ENST00000417774 250 ntBASIC2.33□□□□□ -2.04
ZNF544Q6NX49 ELOCP4-201ENST00000420090 333 ntBASIC2.33□□□□□ -2.04
ZNF544Q6NX49 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.33□□□□□ -2.04
ZNF544Q6NX49 MED13P1-201ENST00000428342 171 ntBASIC2.33□□□□□ -2.04
ZNF544Q6NX49 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.33□□□□□ -2.04
ZNF544Q6NX49 ARL5AP4-201ENST00000430731 512 ntBASIC2.33□□□□□ -2.04
ZNF544Q6NX49 MTND3P21-201ENST00000433774 331 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms