Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 AC040958.1-201ENST00000561102 201 ntBASIC5.35□□□□□ -1.55
PRPF38BQ5VTL8 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.35□□□□□ -1.55
PRPF38BQ5VTL8 FAM27B-201ENST00000610601 213 ntBASIC5.35□□□□□ -1.55
PRPF38BQ5VTL8 AC024581.2-201ENST00000619986 252 ntBASIC5.35□□□□□ -1.55
PRPF38BQ5VTL8 MIR3653-201ENST00000625572 110 ntBASIC5.35□□□□□ -1.55
PRPF38BQ5VTL8 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
PRPF38BQ5VTL8 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
PRPF38BQ5VTL8 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.35□□□□□ -1.55
PRPF38BQ5VTL8 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.35□□□□□ -1.55
PRPF38BQ5VTL8 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC5.35□□□□□ -1.55
PRPF38BQ5VTL8 AC008568.2-201ENST00000623862 2313 ntBASIC5.35□□□□□ -1.55
PRPF38BQ5VTL8 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PRPF38BQ5VTL8 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
PRPF38BQ5VTL8 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PRPF38BQ5VTL8 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PRPF38BQ5VTL8 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC5.34□□□□□ -1.55
PRPF38BQ5VTL8 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PRPF38BQ5VTL8 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PRPF38BQ5VTL8 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PRPF38BQ5VTL8 AC007390.2-201ENST00000606229 3803 ntBASIC5.34□□□□□ -1.55
PRPF38BQ5VTL8 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PRPF38BQ5VTL8 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PRPF38BQ5VTL8 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
PRPF38BQ5VTL8 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC5.34□□□□□ -1.55
PRPF38BQ5VTL8 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
PRPF38BQ5VTL8 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.34□□□□□ -1.55
PRPF38BQ5VTL8 UBE2WP1-201ENST00000362030 340 ntBASIC5.34□□□□□ -1.55
PRPF38BQ5VTL8 RNA5SP119-201ENST00000362715 117 ntBASIC5.34□□□□□ -1.55
PRPF38BQ5VTL8 RNU6-658P-201ENST00000384606 106 ntBASIC5.34□□□□□ -1.55
PRPF38BQ5VTL8 Y_RNA.570-201ENST00000384750 101 ntBASIC5.34□□□□□ -1.55
PRPF38BQ5VTL8 RNA5SP213-201ENST00000391031 106 ntBASIC5.34□□□□□ -1.55
PRPF38BQ5VTL8 U3.39-201ENST00000408569 239 ntBASIC5.34□□□□□ -1.55
PRPF38BQ5VTL8 IGKV1OR9-2-201ENST00000431378 277 ntBASIC5.34□□□□□ -1.55
PRPF38BQ5VTL8 RPL23AP93-201ENST00000440847 484 ntBASIC5.34□□□□□ -1.55
PRPF38BQ5VTL8 RPL23AP56-201ENST00000460778 453 ntBASIC5.34□□□□□ -1.55
PRPF38BQ5VTL8 RPL26P26-201ENST00000480251 434 ntBASIC5.34□□□□□ -1.55
PRPF38BQ5VTL8 RN7SL810P-201ENST00000493031 276 ntBASIC5.34□□□□□ -1.55
PRPF38BQ5VTL8 RNU6-1183P-201ENST00000517054 60 ntBASIC5.34□□□□□ -1.55
PRPF38BQ5VTL8 IGLVIV-65-201ENST00000517313 360 ntBASIC5.34□□□□□ -1.55
PRPF38BQ5VTL8 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC5.34□□□□□ -1.55
PRPF38BQ5VTL8 UBL5P4-201ENST00000562584 236 ntBASIC5.34□□□□□ -1.55
PRPF38BQ5VTL8 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC5.34□□□□□ -1.55
PRPF38BQ5VTL8 AC020895.1-201ENST00000595362 272 ntBASIC5.34□□□□□ -1.55
PRPF38BQ5VTL8 AC073349.3-201ENST00000617616 186 ntBASIC5.34□□□□□ -1.55
PRPF38BQ5VTL8 BMS1P21-201ENST00000634565 365 ntBASIC5.34□□□□□ -1.55
PRPF38BQ5VTL8 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.34□□□□□ -1.55
PRPF38BQ5VTL8 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PRPF38BQ5VTL8 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PRPF38BQ5VTL8 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.55
PRPF38BQ5VTL8 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.55
PRPF38BQ5VTL8 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.34□□□□□ -1.55
PRPF38BQ5VTL8 AL161912.2-201ENST00000565707 3007 ntBASIC5.34□□□□□ -1.56
PRPF38BQ5VTL8 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
PRPF38BQ5VTL8 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.56
PRPF38BQ5VTL8 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC5.33□□□□□ -1.56
PRPF38BQ5VTL8 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.33□□□□□ -1.56
PRPF38BQ5VTL8 OR4F13P-202ENST00000560066 2054 ntBASIC5.33□□□□□ -1.56
PRPF38BQ5VTL8 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PRPF38BQ5VTL8 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
PRPF38BQ5VTL8 GVINP1-202ENST00000531871 7271 ntBASIC5.33□□□□□ -1.56
PRPF38BQ5VTL8 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
PRPF38BQ5VTL8 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PRPF38BQ5VTL8 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.33□□□□□ -1.56
PRPF38BQ5VTL8 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.33□□□□□ -1.56
PRPF38BQ5VTL8 RNA5SP453-201ENST00000362503 119 ntBASIC5.33□□□□□ -1.56
PRPF38BQ5VTL8 Y_RNA.331-201ENST00000365267 102 ntBASIC5.33□□□□□ -1.56
PRPF38BQ5VTL8 RNU6-959P-201ENST00000384671 107 ntBASIC5.33□□□□□ -1.56
PRPF38BQ5VTL8 RNU6-1154P-201ENST00000391001 104 ntBASIC5.33□□□□□ -1.56
PRPF38BQ5VTL8 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
PRPF38BQ5VTL8 RNU6-1001P-201ENST00000411265 100 ntBASIC5.33□□□□□ -1.56
PRPF38BQ5VTL8 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC5.33□□□□□ -1.56
PRPF38BQ5VTL8 MRPS10P1-201ENST00000448483 130 ntBASIC5.33□□□□□ -1.56
PRPF38BQ5VTL8 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC5.33□□□□□ -1.56
PRPF38BQ5VTL8 HMGB1P22-201ENST00000505315 124 ntBASIC5.33□□□□□ -1.56
PRPF38BQ5VTL8 RNU6-313P-201ENST00000516317 112 ntBASIC5.33□□□□□ -1.56
PRPF38BQ5VTL8 RNU6-62P-201ENST00000516526 102 ntBASIC5.33□□□□□ -1.56
PRPF38BQ5VTL8 CYCSP39-201ENST00000565821 309 ntBASIC5.33□□□□□ -1.56
PRPF38BQ5VTL8 SNORA51-201ENST00000606420 132 ntBASIC5.33□□□□□ -1.56
PRPF38BQ5VTL8 UBE2Q2P6-201ENST00000612666 153 ntBASIC5.33□□□□□ -1.56
PRPF38BQ5VTL8 PSMD5-AS1-215ENST00000640622 205 ntBASIC5.33□□□□□ -1.56
PRPF38BQ5VTL8 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC5.33□□□□□ -1.56
PRPF38BQ5VTL8 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.33□□□□□ -1.56
PRPF38BQ5VTL8 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PRPF38BQ5VTL8 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
PRPF38BQ5VTL8 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC5.32□□□□□ -1.56
PRPF38BQ5VTL8 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.32□□□□□ -1.56
PRPF38BQ5VTL8 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
PRPF38BQ5VTL8 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PRPF38BQ5VTL8 RNA5SP513-201ENST00000364648 118 ntBASIC5.32□□□□□ -1.56
PRPF38BQ5VTL8 RNU6-898P-201ENST00000365627 104 ntBASIC5.32□□□□□ -1.56
PRPF38BQ5VTL8 Y_RNA.446-201ENST00000384178 104 ntBASIC5.32□□□□□ -1.56
PRPF38BQ5VTL8 RNU6-140P-201ENST00000384566 108 ntBASIC5.32□□□□□ -1.56
PRPF38BQ5VTL8 SNORA22C-201ENST00000384614 134 ntBASIC5.32□□□□□ -1.56
PRPF38BQ5VTL8 MIR10B-201ENST00000385011 110 ntBASIC5.32□□□□□ -1.56
PRPF38BQ5VTL8 MIR325-201ENST00000385260 98 ntBASIC5.32□□□□□ -1.56
PRPF38BQ5VTL8 HLFP1-201ENST00000402375 499 ntBASIC5.32□□□□□ -1.56
PRPF38BQ5VTL8 RPL23AP36-201ENST00000413895 458 ntBASIC5.32□□□□□ -1.56
PRPF38BQ5VTL8 AC024067.1-201ENST00000426199 223 ntBASIC5.32□□□□□ -1.56
PRPF38BQ5VTL8 AL117339.2-201ENST00000430475 180 ntBASIC5.32□□□□□ -1.56
PRPF38BQ5VTL8 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms