Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 RN7SKP21-201ENST00000516503 220 ntBASIC5.68□□□□□ -1.5
VARS2Q5ST30 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.68□□□□□ -1.5
VARS2Q5ST30 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.68□□□□□ -1.5
VARS2Q5ST30 AC027309.3-201ENST00000623419 351 ntBASIC5.68□□□□□ -1.5
VARS2Q5ST30 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.68□□□□□ -1.5
VARS2Q5ST30 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.68□□□□□ -1.5
VARS2Q5ST30 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VARS2Q5ST30 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
VARS2Q5ST30 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
VARS2Q5ST30 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.68□□□□□ -1.5
VARS2Q5ST30 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VARS2Q5ST30 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
VARS2Q5ST30 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VARS2Q5ST30 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
VARS2Q5ST30 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VARS2Q5ST30 AC083899.1-201ENST00000454465 3819 ntBASIC5.67□□□□□ -1.5
VARS2Q5ST30 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.67□□□□□ -1.5
VARS2Q5ST30 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
VARS2Q5ST30 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VARS2Q5ST30 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
VARS2Q5ST30 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VARS2Q5ST30 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
VARS2Q5ST30 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.67□□□□□ -1.5
VARS2Q5ST30 Y_RNA.456-201ENST00000384232 111 ntBASIC5.67□□□□□ -1.5
VARS2Q5ST30 Y_RNA.528-201ENST00000384575 108 ntBASIC5.67□□□□□ -1.5
VARS2Q5ST30 RNU2-32P-201ENST00000411193 191 ntBASIC5.67□□□□□ -1.5
VARS2Q5ST30 AC073465.2-201ENST00000440938 498 ntBASIC5.67□□□□□ -1.5
VARS2Q5ST30 AC009127.1-201ENST00000467090 155 ntBASIC5.67□□□□□ -1.5
VARS2Q5ST30 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.67□□□□□ -1.5
VARS2Q5ST30 AC091912.1-201ENST00000511351 248 ntBASIC5.67□□□□□ -1.5
VARS2Q5ST30 RNA5SP367-201ENST00000516557 118 ntBASIC5.67□□□□□ -1.5
VARS2Q5ST30 MIR3934-201ENST00000579806 107 ntBASIC5.67□□□□□ -1.5
VARS2Q5ST30 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VARS2Q5ST30 AL356157.2-201ENST00000605122 111 ntBASIC5.67□□□□□ -1.5
VARS2Q5ST30 MESTIT1_1.1-201ENST00000618871 140 ntBASIC5.67□□□□□ -1.5
VARS2Q5ST30 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VARS2Q5ST30 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
VARS2Q5ST30 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VARS2Q5ST30 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
VARS2Q5ST30 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
VARS2Q5ST30 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC5.66□□□□□ -1.5
VARS2Q5ST30 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.66□□□□□ -1.5
VARS2Q5ST30 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
VARS2Q5ST30 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
VARS2Q5ST30 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.66□□□□□ -1.5
VARS2Q5ST30 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
VARS2Q5ST30 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.66□□□□□ -1.5
VARS2Q5ST30 Y_RNA.17-201ENST00000362433 111 ntBASIC5.66□□□□□ -1.5
VARS2Q5ST30 SNORD115-30-201ENST00000364117 82 ntBASIC5.66□□□□□ -1.5
VARS2Q5ST30 Y_RNA.310-201ENST00000365063 113 ntBASIC5.66□□□□□ -1.5
VARS2Q5ST30 Y_RNA.342-201ENST00000365352 113 ntBASIC5.66□□□□□ -1.5
VARS2Q5ST30 AL590762.2-201ENST00000395798 571 ntBASIC5.66□□□□□ -1.5
VARS2Q5ST30 MIR1263-201ENST00000408324 86 ntBASIC5.66□□□□□ -1.5
VARS2Q5ST30 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.66□□□□□ -1.5
VARS2Q5ST30 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.66□□□□□ -1.5
VARS2Q5ST30 AL078601.1-201ENST00000444542 271 ntBASIC5.66□□□□□ -1.5
VARS2Q5ST30 AC107297.1-201ENST00000459991 176 ntBASIC5.66□□□□□ -1.5
VARS2Q5ST30 UQCRHP4-201ENST00000471686 272 ntBASIC5.66□□□□□ -1.5
VARS2Q5ST30 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC5.66□□□□□ -1.5
VARS2Q5ST30 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.66□□□□□ -1.5
VARS2Q5ST30 RNA5SP439-201ENST00000617595 124 ntBASIC5.66□□□□□ -1.5
VARS2Q5ST30 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.66□□□□□ -1.5
VARS2Q5ST30 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
VARS2Q5ST30 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VARS2Q5ST30 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
VARS2Q5ST30 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
VARS2Q5ST30 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
VARS2Q5ST30 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VARS2Q5ST30 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC5.66□□□□□ -1.5
VARS2Q5ST30 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.65□□□□□ -1.5
VARS2Q5ST30 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
VARS2Q5ST30 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
VARS2Q5ST30 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
VARS2Q5ST30 RNU1-146P-201ENST00000364015 165 ntBASIC5.65□□□□□ -1.5
VARS2Q5ST30 Y_RNA.341-201ENST00000365341 102 ntBASIC5.65□□□□□ -1.5
VARS2Q5ST30 RNU6-882P-201ENST00000391025 103 ntBASIC5.65□□□□□ -1.5
VARS2Q5ST30 RNU6-855P-201ENST00000410395 104 ntBASIC5.65□□□□□ -1.5
VARS2Q5ST30 FTLP19-201ENST00000433300 394 ntBASIC5.65□□□□□ -1.5
VARS2Q5ST30 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.65□□□□□ -1.5
VARS2Q5ST30 AC090602.1-201ENST00000469695 252 ntBASIC5.65□□□□□ -1.5
VARS2Q5ST30 RN7SL481P-201ENST00000477764 299 ntBASIC5.65□□□□□ -1.5
VARS2Q5ST30 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC5.65□□□□□ -1.5
VARS2Q5ST30 SNORA43.2-201ENST00000516652 128 ntBASIC5.65□□□□□ -1.5
VARS2Q5ST30 RNU6-197P-201ENST00000516680 100 ntBASIC5.65□□□□□ -1.5
VARS2Q5ST30 SCARNA20.4-201ENST00000516969 131 ntBASIC5.65□□□□□ -1.5
VARS2Q5ST30 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC5.65□□□□□ -1.5
VARS2Q5ST30 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC5.65□□□□□ -1.5
VARS2Q5ST30 AC019288.1-201ENST00000557918 224 ntBASIC5.65□□□□□ -1.5
VARS2Q5ST30 RN7SL52P-201ENST00000584271 284 ntBASIC5.65□□□□□ -1.5
VARS2Q5ST30 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.65□□□□□ -1.5
VARS2Q5ST30 RN7SL722P-201ENST00000617780 284 ntBASIC5.65□□□□□ -1.5
VARS2Q5ST30 RN7SL565P-201ENST00000618246 284 ntBASIC5.65□□□□□ -1.5
VARS2Q5ST30 AL035470.1-201ENST00000622571 220 ntBASIC5.65□□□□□ -1.5
VARS2Q5ST30 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
VARS2Q5ST30 AP002512.4-202ENST00000641599 4530 ntBASIC5.65□□□□□ -1.51
VARS2Q5ST30 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.51
VARS2Q5ST30 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC5.65□□□□□ -1.51
VARS2Q5ST30 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC5.65□□□□□ -1.51
VARS2Q5ST30 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.64□□□□□ -1.51
VARS2Q5ST30 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms