Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
RNFT1Q5M7Z0 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RNFT1Q5M7Z0 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
RNFT1Q5M7Z0 ABCC13-202ENST00000463099 3842 ntBASIC4.64□□□□□ -1.67
RNFT1Q5M7Z0 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
RNFT1Q5M7Z0 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.64□□□□□ -1.67
RNFT1Q5M7Z0 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RNFT1Q5M7Z0 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
RNFT1Q5M7Z0 AC134026.1-201ENST00000623249 2239 ntBASIC4.64□□□□□ -1.67
RNFT1Q5M7Z0 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RNFT1Q5M7Z0 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.64□□□□□ -1.67
RNFT1Q5M7Z0 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.64□□□□□ -1.67
RNFT1Q5M7Z0 Y_RNA.35-201ENST00000362601 101 ntBASIC4.64□□□□□ -1.67
RNFT1Q5M7Z0 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.64□□□□□ -1.67
RNFT1Q5M7Z0 MIR616-201ENST00000385293 97 ntBASIC4.64□□□□□ -1.67
RNFT1Q5M7Z0 BX323845.1-201ENST00000432417 179 ntBASIC4.64□□□□□ -1.67
RNFT1Q5M7Z0 AC099670.2-201ENST00000435130 321 ntBASIC4.64□□□□□ -1.67
RNFT1Q5M7Z0 AC020593.1-201ENST00000507399 299 ntBASIC4.64□□□□□ -1.67
RNFT1Q5M7Z0 COX6B1P5-201ENST00000509843 249 ntBASIC4.64□□□□□ -1.67
RNFT1Q5M7Z0 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RNFT1Q5M7Z0 RNA5SP43-201ENST00000516559 110 ntBASIC4.64□□□□□ -1.67
RNFT1Q5M7Z0 AC021006.3-201ENST00000530771 192 ntBASIC4.64□□□□□ -1.67
RNFT1Q5M7Z0 AC016256.1-201ENST00000547971 354 ntBASIC4.64□□□□□ -1.67
RNFT1Q5M7Z0 MIR6820-201ENST00000611508 62 ntBASIC4.64□□□□□ -1.67
RNFT1Q5M7Z0 MIR6133-201ENST00000617057 108 ntBASIC4.64□□□□□ -1.67
RNFT1Q5M7Z0 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.64□□□□□ -1.67
RNFT1Q5M7Z0 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.64□□□□□ -1.67
RNFT1Q5M7Z0 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
RNFT1Q5M7Z0 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
RNFT1Q5M7Z0 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
RNFT1Q5M7Z0 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.63□□□□□ -1.67
RNFT1Q5M7Z0 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
RNFT1Q5M7Z0 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
RNFT1Q5M7Z0 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
RNFT1Q5M7Z0 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RNFT1Q5M7Z0 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RNFT1Q5M7Z0 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
RNFT1Q5M7Z0 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RNFT1Q5M7Z0 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
RNFT1Q5M7Z0 FAM91A3P-201ENST00000456826 2544 ntBASIC4.63□□□□□ -1.67
RNFT1Q5M7Z0 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.63□□□□□ -1.67
RNFT1Q5M7Z0 RNU6-78P-201ENST00000362897 107 ntBASIC4.63□□□□□ -1.67
RNFT1Q5M7Z0 RNU6-105P-201ENST00000363909 104 ntBASIC4.63□□□□□ -1.67
RNFT1Q5M7Z0 RNU6-768P-201ENST00000384683 107 ntBASIC4.63□□□□□ -1.67
RNFT1Q5M7Z0 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
RNFT1Q5M7Z0 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.63□□□□□ -1.67
RNFT1Q5M7Z0 AC138761.5-201ENST00000433967 325 ntBASIC4.63□□□□□ -1.67
RNFT1Q5M7Z0 GEMIN8P3-201ENST00000445417 720 ntBASIC4.63□□□□□ -1.67
RNFT1Q5M7Z0 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.63□□□□□ -1.67
RNFT1Q5M7Z0 RN7SL814P-201ENST00000487715 300 ntBASIC4.63□□□□□ -1.67
RNFT1Q5M7Z0 AC007686.1-201ENST00000488511 463 ntBASIC4.63□□□□□ -1.67
RNFT1Q5M7Z0 RN7SL244P-201ENST00000493405 297 ntBASIC4.63□□□□□ -1.67
RNFT1Q5M7Z0 AC140172.1-201ENST00000502928 141 ntBASIC4.63□□□□□ -1.67
RNFT1Q5M7Z0 RNU6-155P-201ENST00000516347 100 ntBASIC4.63□□□□□ -1.67
RNFT1Q5M7Z0 RN7SKP277-201ENST00000516895 283 ntBASIC4.63□□□□□ -1.67
RNFT1Q5M7Z0 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.63□□□□□ -1.67
RNFT1Q5M7Z0 AL391903.3-201ENST00000612158 163 ntBASIC4.63□□□□□ -1.67
RNFT1Q5M7Z0 AC106754.2-201ENST00000623006 233 ntBASIC4.63□□□□□ -1.67
RNFT1Q5M7Z0 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
RNFT1Q5M7Z0 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RNFT1Q5M7Z0 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.63□□□□□ -1.67
RNFT1Q5M7Z0 SAGE2P-201ENST00000420011 2126 ntBASIC4.63□□□□□ -1.67
RNFT1Q5M7Z0 MAPK10-349ENST00000641767 3661 ntBASIC4.62□□□□□ -1.67
RNFT1Q5M7Z0 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
RNFT1Q5M7Z0 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.62□□□□□ -1.67
RNFT1Q5M7Z0 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RNFT1Q5M7Z0 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RNFT1Q5M7Z0 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
RNFT1Q5M7Z0 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
RNFT1Q5M7Z0 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RNFT1Q5M7Z0 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.62□□□□□ -1.67
RNFT1Q5M7Z0 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
RNFT1Q5M7Z0 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RNFT1Q5M7Z0 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
RNFT1Q5M7Z0 RN7SKP153-201ENST00000365026 316 ntBASIC4.62□□□□□ -1.67
RNFT1Q5M7Z0 Y_RNA.393-201ENST00000383936 102 ntBASIC4.62□□□□□ -1.67
RNFT1Q5M7Z0 SNORA29-201ENST00000384183 140 ntBASIC4.62□□□□□ -1.67
RNFT1Q5M7Z0 Y_RNA.558-201ENST00000384685 113 ntBASIC4.62□□□□□ -1.67
RNFT1Q5M7Z0 SNORA40C-201ENST00000391285 128 ntBASIC4.62□□□□□ -1.67
RNFT1Q5M7Z0 RNU2-54P-201ENST00000410299 190 ntBASIC4.62□□□□□ -1.67
RNFT1Q5M7Z0 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.62□□□□□ -1.67
RNFT1Q5M7Z0 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.62□□□□□ -1.67
RNFT1Q5M7Z0 AL121914.1-201ENST00000450188 156 ntBASIC4.62□□□□□ -1.67
RNFT1Q5M7Z0 RPS27P1-201ENST00000450552 247 ntBASIC4.62□□□□□ -1.67
RNFT1Q5M7Z0 RNU6-625P-201ENST00000459412 107 ntBASIC4.62□□□□□ -1.67
RNFT1Q5M7Z0 SCARNA8-201ENST00000515924 131 ntBASIC4.62□□□□□ -1.67
RNFT1Q5M7Z0 RNU2-60P-201ENST00000517290 128 ntBASIC4.62□□□□□ -1.67
RNFT1Q5M7Z0 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.62□□□□□ -1.67
RNFT1Q5M7Z0 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.62□□□□□ -1.67
RNFT1Q5M7Z0 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.62□□□□□ -1.67
RNFT1Q5M7Z0 AL391813.1-201ENST00000603098 260 ntBASIC4.62□□□□□ -1.67
RNFT1Q5M7Z0 AL590392.1-201ENST00000604960 446 ntBASIC4.62□□□□□ -1.67
RNFT1Q5M7Z0 AC013791.1-201ENST00000616619 62 ntBASIC4.62□□□□□ -1.67
RNFT1Q5M7Z0 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC4.62□□□□□ -1.67
RNFT1Q5M7Z0 AP001642.1-201ENST00000624727 2117 ntBASIC4.62□□□□□ -1.67
RNFT1Q5M7Z0 UGP2-230ENST00000626380 276 ntTSL 5 BASIC4.62□□□□□ -1.67
RNFT1Q5M7Z0 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.62□□□□□ -1.67
RNFT1Q5M7Z0 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
RNFT1Q5M7Z0 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
RNFT1Q5M7Z0 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms