Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AC005498.1-201ENST00000592125 465 ntBASIC4.32□□□□□ -1.72
CCDC144BQ3MJ40 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.32□□□□□ -1.72
CCDC144BQ3MJ40 uc_338.5-201ENST00000611839 155 ntBASIC4.32□□□□□ -1.72
CCDC144BQ3MJ40 ATP5A1P2-202ENST00000616464 443 ntBASIC4.32□□□□□ -1.72
CCDC144BQ3MJ40 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC4.32□□□□□ -1.72
CCDC144BQ3MJ40 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CCDC144BQ3MJ40 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC144BQ3MJ40 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC4.32□□□□□ -1.72
CCDC144BQ3MJ40 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CCDC144BQ3MJ40 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.31□□□□□ -1.72
CCDC144BQ3MJ40 AC091152.2-201ENST00000591628 2569 ntBASIC4.31□□□□□ -1.72
CCDC144BQ3MJ40 AC010680.1-201ENST00000590024 3590 ntBASIC4.31□□□□□ -1.72
CCDC144BQ3MJ40 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.31□□□□□ -1.72
CCDC144BQ3MJ40 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC4.31□□□□□ -1.72
CCDC144BQ3MJ40 SNORD3E-201ENST00000362899 217 ntBASIC4.31□□□□□ -1.72
CCDC144BQ3MJ40 RNA5SP51-201ENST00000364750 119 ntBASIC4.31□□□□□ -1.72
CCDC144BQ3MJ40 RNU6-1303P-201ENST00000364841 107 ntBASIC4.31□□□□□ -1.72
CCDC144BQ3MJ40 RNU6-128P-201ENST00000383976 107 ntBASIC4.31□□□□□ -1.72
CCDC144BQ3MJ40 RNU6-198P-201ENST00000384258 104 ntBASIC4.31□□□□□ -1.72
CCDC144BQ3MJ40 MIR10A-201ENST00000385043 110 ntBASIC4.31□□□□□ -1.72
CCDC144BQ3MJ40 MIR199A2-201ENST00000385289 110 ntBASIC4.31□□□□□ -1.72
CCDC144BQ3MJ40 MIR591-201ENST00000385290 95 ntBASIC4.31□□□□□ -1.72
CCDC144BQ3MJ40 HLFP1-201ENST00000402375 499 ntBASIC4.31□□□□□ -1.72
CCDC144BQ3MJ40 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC144BQ3MJ40 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC144BQ3MJ40 AC007390.1-201ENST00000415722 356 ntBASIC4.31□□□□□ -1.72
CCDC144BQ3MJ40 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC144BQ3MJ40 AL159169.1-201ENST00000421119 127 ntBASIC4.31□□□□□ -1.72
CCDC144BQ3MJ40 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.31□□□□□ -1.72
CCDC144BQ3MJ40 MRPS31P2-201ENST00000451581 518 ntBASIC4.31□□□□□ -1.72
CCDC144BQ3MJ40 RNU7-23P-201ENST00000459465 62 ntBASIC4.31□□□□□ -1.72
CCDC144BQ3MJ40 RNU7-138P-201ENST00000459479 64 ntBASIC4.31□□□□□ -1.72
CCDC144BQ3MJ40 AC091951.2-201ENST00000500762 203 ntBASIC4.31□□□□□ -1.72
CCDC144BQ3MJ40 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC144BQ3MJ40 RN7SKP18-201ENST00000516005 275 ntBASIC4.31□□□□□ -1.72
CCDC144BQ3MJ40 RNU6-864P-201ENST00000516256 108 ntBASIC4.31□□□□□ -1.72
CCDC144BQ3MJ40 RNU6-875P-201ENST00000516488 106 ntBASIC4.31□□□□□ -1.72
CCDC144BQ3MJ40 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.31□□□□□ -1.72
CCDC144BQ3MJ40 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC4.31□□□□□ -1.72
CCDC144BQ3MJ40 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC144BQ3MJ40 MIR5692C1-201ENST00000585309 91 ntBASIC4.31□□□□□ -1.72
CCDC144BQ3MJ40 CTHRC1P1-201ENST00000605383 469 ntBASIC4.31□□□□□ -1.72
CCDC144BQ3MJ40 AL121757.2-201ENST00000611223 313 ntBASIC4.31□□□□□ -1.72
CCDC144BQ3MJ40 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC4.31□□□□□ -1.72
CCDC144BQ3MJ40 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC144BQ3MJ40 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.31□□□□□ -1.72
CCDC144BQ3MJ40 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC144BQ3MJ40 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.31□□□□□ -1.72
CCDC144BQ3MJ40 MTCO1P12-201ENST00000414273 1543 ntBASIC4.31□□□□□ -1.72
CCDC144BQ3MJ40 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC144BQ3MJ40 RNA5SP72-201ENST00000364442 117 ntBASIC4.3□□□□□ -1.72
CCDC144BQ3MJ40 RNU6-831P-201ENST00000384548 107 ntBASIC4.3□□□□□ -1.72
CCDC144BQ3MJ40 PTMAP5-201ENST00000393073 333 ntBASIC4.3□□□□□ -1.72
CCDC144BQ3MJ40 RNU6-1148P-201ENST00000410992 104 ntBASIC4.3□□□□□ -1.72
CCDC144BQ3MJ40 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC4.3□□□□□ -1.72
CCDC144BQ3MJ40 AL714022.1-201ENST00000439897 151 ntBASIC4.3□□□□□ -1.72
CCDC144BQ3MJ40 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC4.3□□□□□ -1.72
CCDC144BQ3MJ40 U3.44-201ENST00000458938 192 ntBASIC4.3□□□□□ -1.72
CCDC144BQ3MJ40 RNU7-66P-201ENST00000459469 62 ntBASIC4.3□□□□□ -1.72
CCDC144BQ3MJ40 HMGN2P13-201ENST00000476476 274 ntBASIC4.3□□□□□ -1.72
CCDC144BQ3MJ40 AC074250.1-201ENST00000511117 192 ntBASIC4.3□□□□□ -1.72
CCDC144BQ3MJ40 RN7SKP83-201ENST00000516512 178 ntBASIC4.3□□□□□ -1.72
CCDC144BQ3MJ40 RNA5SP164-201ENST00000516533 110 ntBASIC4.3□□□□□ -1.72
CCDC144BQ3MJ40 RNU6-323P-201ENST00000521915 107 ntBASIC4.3□□□□□ -1.72
CCDC144BQ3MJ40 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC144BQ3MJ40 AL163153.1-201ENST00000554223 283 ntBASIC4.3□□□□□ -1.72
CCDC144BQ3MJ40 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC144BQ3MJ40 MIR4742-201ENST00000581069 85 ntBASIC4.3□□□□□ -1.72
CCDC144BQ3MJ40 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC144BQ3MJ40 AC005261.5-201ENST00000596280 355 ntBASIC4.3□□□□□ -1.72
CCDC144BQ3MJ40 AP000787.2-201ENST00000604432 568 ntBASIC4.3□□□□□ -1.72
CCDC144BQ3MJ40 RNU1-30P-201ENST00000606575 163 ntBASIC4.3□□□□□ -1.72
CCDC144BQ3MJ40 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC144BQ3MJ40 AL161629.2-201ENST00000615347 275 ntBASIC4.3□□□□□ -1.72
CCDC144BQ3MJ40 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.3□□□□□ -1.72
CCDC144BQ3MJ40 AC073073.2-201ENST00000609827 2578 ntBASIC4.3□□□□□ -1.72
CCDC144BQ3MJ40 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
CCDC144BQ3MJ40 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC144BQ3MJ40 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
CCDC144BQ3MJ40 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC144BQ3MJ40 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC144BQ3MJ40 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
CCDC144BQ3MJ40 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC144BQ3MJ40 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CCDC144BQ3MJ40 RNU6-384P-201ENST00000364900 104 ntBASIC4.29□□□□□ -1.72
CCDC144BQ3MJ40 MIR491-201ENST00000384877 84 ntBASIC4.29□□□□□ -1.72
CCDC144BQ3MJ40 RNU6-328P-201ENST00000390887 106 ntBASIC4.29□□□□□ -1.72
CCDC144BQ3MJ40 RPS15AP6-201ENST00000420703 385 ntBASIC4.29□□□□□ -1.72
CCDC144BQ3MJ40 AP000907.1-201ENST00000428428 510 ntBASIC4.29□□□□□ -1.72
CCDC144BQ3MJ40 AC093019.1-201ENST00000443135 252 ntBASIC4.29□□□□□ -1.72
CCDC144BQ3MJ40 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC4.29□□□□□ -1.72
CCDC144BQ3MJ40 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC4.29□□□□□ -1.72
CCDC144BQ3MJ40 BTF3P15-201ENST00000455606 336 ntBASIC4.29□□□□□ -1.72
CCDC144BQ3MJ40 AC006026.2-201ENST00000457376 180 ntBASIC4.29□□□□□ -1.72
CCDC144BQ3MJ40 RPS27AP10-201ENST00000496103 208 ntBASIC4.29□□□□□ -1.72
CCDC144BQ3MJ40 AC113155.1-201ENST00000511141 769 ntBASIC4.29□□□□□ -1.72
CCDC144BQ3MJ40 RNU6-711P-201ENST00000517255 106 ntBASIC4.29□□□□□ -1.72
CCDC144BQ3MJ40 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC144BQ3MJ40 AP000889.2-201ENST00000532684 490 ntBASIC4.29□□□□□ -1.72
CCDC144BQ3MJ40 AC037471.2-201ENST00000564941 598 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms