Protein–RNA interactions for Protein: Q15906

VPS72, Vacuolar protein sorting-associated protein 72 homolog, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72Q15906 AC006989.1-201ENST00000427212 131 ntBASIC4.25□□□□□ -1.73
VPS72Q15906 SAR1AP4-201ENST00000429225 591 ntBASIC4.25□□□□□ -1.73
VPS72Q15906 MTATP6P16-201ENST00000434543 526 ntBASIC4.25□□□□□ -1.73
VPS72Q15906 HMGN2P20-201ENST00000437531 273 ntBASIC4.25□□□□□ -1.73
VPS72Q15906 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.25□□□□□ -1.73
VPS72Q15906 SDAD1P2-201ENST00000441308 2028 ntBASIC4.25□□□□□ -1.73
VPS72Q15906 AL162389.1-201ENST00000449233 177 ntBASIC4.25□□□□□ -1.73
VPS72Q15906 RNU7-59P-201ENST00000459101 61 ntBASIC4.25□□□□□ -1.73
VPS72Q15906 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
VPS72Q15906 RNU4ATAC8P-201ENST00000516196 109 ntBASIC4.25□□□□□ -1.73
VPS72Q15906 NARSP2-201ENST00000518524 679 ntBASIC4.25□□□□□ -1.73
VPS72Q15906 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.25□□□□□ -1.73
VPS72Q15906 AP000857.1-201ENST00000532151 543 ntBASIC4.25□□□□□ -1.73
VPS72Q15906 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.25□□□□□ -1.73
VPS72Q15906 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.25□□□□□ -1.73
VPS72Q15906 PSMA3P-201ENST00000555485 635 ntBASIC4.25□□□□□ -1.73
VPS72Q15906 AL355836.1-201ENST00000555951 870 ntBASIC4.25□□□□□ -1.73
VPS72Q15906 AL121821.2-201ENST00000556081 394 ntBASIC4.25□□□□□ -1.73
VPS72Q15906 OR4H12P-201ENST00000556269 907 ntBASIC4.25□□□□□ -1.73
VPS72Q15906 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.25□□□□□ -1.73
VPS72Q15906 AC021646.1-201ENST00000605469 484 ntBASIC4.25□□□□□ -1.73
VPS72Q15906 AL133255.1-201ENST00000606374 441 ntBASIC4.25□□□□□ -1.73
VPS72Q15906 RNU6-89P-201ENST00000606519 100 ntBASIC4.25□□□□□ -1.73
VPS72Q15906 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.25□□□□□ -1.73
VPS72Q15906 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
VPS72Q15906 OR4G2P-202ENST00000641004 1759 ntBASIC4.25□□□□□ -1.73
VPS72Q15906 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
VPS72Q15906 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC4.24□□□□□ -1.73
VPS72Q15906 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC4.24□□□□□ -1.73
VPS72Q15906 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
VPS72Q15906 MIR591-201ENST00000385290 95 ntBASIC4.24□□□□□ -1.73
VPS72Q15906 HSPE1P8-201ENST00000406997 288 ntBASIC4.24□□□□□ -1.73
VPS72Q15906 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC4.24□□□□□ -1.73
VPS72Q15906 RNU6-193P-201ENST00000410977 107 ntBASIC4.24□□□□□ -1.73
VPS72Q15906 RN7SKP140-201ENST00000411196 284 ntBASIC4.24□□□□□ -1.73
VPS72Q15906 NCOR1P3-201ENST00000420479 303 ntBASIC4.24□□□□□ -1.73
VPS72Q15906 MED13P1-201ENST00000428342 171 ntBASIC4.24□□□□□ -1.73
VPS72Q15906 ERLEC1P1-201ENST00000433806 578 ntBASIC4.24□□□□□ -1.73
VPS72Q15906 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.24□□□□□ -1.73
VPS72Q15906 AC105272.1-201ENST00000438604 198 ntBASIC4.24□□□□□ -1.73
VPS72Q15906 HMGB1P18-201ENST00000438801 619 ntBASIC4.24□□□□□ -1.73
VPS72Q15906 MTND4P19-201ENST00000446659 478 ntBASIC4.24□□□□□ -1.73
VPS72Q15906 MTND1P18-201ENST00000448191 573 ntBASIC4.24□□□□□ -1.73
VPS72Q15906 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC4.24□□□□□ -1.73
VPS72Q15906 AL109933.2-201ENST00000452651 260 ntBASIC4.24□□□□□ -1.73
VPS72Q15906 RPS29P15-201ENST00000458329 171 ntBASIC4.24□□□□□ -1.73
VPS72Q15906 RNU6-329P-201ENST00000459618 107 ntBASIC4.24□□□□□ -1.73
VPS72Q15906 AC007547.1-201ENST00000462177 490 ntBASIC4.24□□□□□ -1.73
VPS72Q15906 AC012181.1-201ENST00000479895 423 ntBASIC4.24□□□□□ -1.73
VPS72Q15906 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.24□□□□□ -1.73
VPS72Q15906 RN7SKP219-201ENST00000516825 296 ntBASIC4.24□□□□□ -1.73
VPS72Q15906 HMGB1P41-201ENST00000520234 440 ntBASIC4.24□□□□□ -1.73
VPS72Q15906 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.24□□□□□ -1.73
VPS72Q15906 AC104237.2-201ENST00000612456 443 ntBASIC4.24□□□□□ -1.73
VPS72Q15906 PLCE1P1-201ENST00000622094 305 ntBASIC4.24□□□□□ -1.73
VPS72Q15906 AC006111.3-201ENST00000622137 383 ntBASIC4.24□□□□□ -1.73
VPS72Q15906 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC4.24□□□□□ -1.73
VPS72Q15906 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC4.24□□□□□ -1.73
VPS72Q15906 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.24□□□□□ -1.73
VPS72Q15906 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.24□□□□□ -1.73
VPS72Q15906 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
VPS72Q15906 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
VPS72Q15906 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
VPS72Q15906 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.24□□□□□ -1.73
VPS72Q15906 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.24□□□□□ -1.73
VPS72Q15906 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
VPS72Q15906 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
VPS72Q15906 HSPE1P11-201ENST00000339579 310 ntBASIC4.23□□□□□ -1.73
VPS72Q15906 RNU6-511P-201ENST00000363496 107 ntBASIC4.23□□□□□ -1.73
VPS72Q15906 SNORA62.1-201ENST00000364287 154 ntBASIC4.23□□□□□ -1.73
VPS72Q15906 RNU6-641P-201ENST00000384006 107 ntBASIC4.23□□□□□ -1.73
VPS72Q15906 Y_RNA.474-201ENST00000384341 102 ntBASIC4.23□□□□□ -1.73
VPS72Q15906 MIR514A2-201ENST00000385131 88 ntBASIC4.23□□□□□ -1.73
VPS72Q15906 MIR514A3-201ENST00000385132 88 ntBASIC4.23□□□□□ -1.73
VPS72Q15906 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC4.23□□□□□ -1.73
VPS72Q15906 RPL21P109-201ENST00000422213 475 ntBASIC4.23□□□□□ -1.73
VPS72Q15906 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.23□□□□□ -1.73
VPS72Q15906 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.23□□□□□ -1.73
VPS72Q15906 MTCYBP6-201ENST00000441810 138 ntBASIC4.23□□□□□ -1.73
VPS72Q15906 Y_RNA.632-201ENST00000459189 102 ntBASIC4.23□□□□□ -1.73
VPS72Q15906 AC126389.1-201ENST00000477436 290 ntBASIC4.23□□□□□ -1.73
VPS72Q15906 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
VPS72Q15906 TTC39CP1-201ENST00000512513 755 ntBASIC4.23□□□□□ -1.73
VPS72Q15906 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC4.23□□□□□ -1.73
VPS72Q15906 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC4.23□□□□□ -1.73
VPS72Q15906 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.23□□□□□ -1.73
VPS72Q15906 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC4.23□□□□□ -1.73
VPS72Q15906 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.23□□□□□ -1.73
VPS72Q15906 ATP1B3P1-201ENST00000605365 821 ntBASIC4.23□□□□□ -1.73
VPS72Q15906 AC009570.1-201ENST00000609599 745 ntBASIC4.23□□□□□ -1.73
VPS72Q15906 MIR6076-201ENST00000617521 113 ntBASIC4.23□□□□□ -1.73
VPS72Q15906 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC4.23□□□□□ -1.73
VPS72Q15906 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
VPS72Q15906 AC004972.1-201ENST00000623934 2209 ntBASIC4.23□□□□□ -1.73
VPS72Q15906 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
VPS72Q15906 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
VPS72Q15906 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
VPS72Q15906 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
VPS72Q15906 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
VPS72Q15906 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms