Protein–RNA interactions for Protein: Q12996

CSTF3, Cleavage stimulation factor subunit 3, humanhuman

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3Q12996 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.03□□□□□ -1.92
CSTF3Q12996 AC024220.1-201ENST00000603675 484 ntBASIC3.03□□□□□ -1.92
CSTF3Q12996 AC007621.1-201ENST00000604544 437 ntBASIC3.03□□□□□ -1.92
CSTF3Q12996 AC122108.2-201ENST00000611946 526 ntBASIC3.03□□□□□ -1.92
CSTF3Q12996 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
CSTF3Q12996 AC084757.4-201ENST00000616350 526 ntBASIC3.03□□□□□ -1.92
CSTF3Q12996 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.03□□□□□ -1.92
CSTF3Q12996 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.03□□□□□ -1.92
CSTF3Q12996 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.92
CSTF3Q12996 AC006020.1-201ENST00000420179 1854 ntBASIC3.03□□□□□ -1.93
CSTF3Q12996 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.02□□□□□ -1.93
CSTF3Q12996 RNU6-552P-201ENST00000362869 119 ntBASIC3.02□□□□□ -1.93
CSTF3Q12996 SNORA51.4-201ENST00000364993 124 ntBASIC3.02□□□□□ -1.93
CSTF3Q12996 MIR578-201ENST00000384828 96 ntBASIC3.02□□□□□ -1.93
CSTF3Q12996 RNU6-780P-201ENST00000391030 104 ntBASIC3.02□□□□□ -1.93
CSTF3Q12996 RPL17P50-201ENST00000396131 546 ntBASIC3.02□□□□□ -1.93
CSTF3Q12996 AL356057.2-201ENST00000403318 432 ntBASIC3.02□□□□□ -1.93
CSTF3Q12996 RN7SKP58-201ENST00000411010 305 ntBASIC3.02□□□□□ -1.93
CSTF3Q12996 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.02□□□□□ -1.93
CSTF3Q12996 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.02□□□□□ -1.93
CSTF3Q12996 AC000111.3-201ENST00000433478 193 ntBASIC3.02□□□□□ -1.93
CSTF3Q12996 AC016691.1-201ENST00000441321 413 ntBASIC3.02□□□□□ -1.93
CSTF3Q12996 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.02□□□□□ -1.93
CSTF3Q12996 AL078601.1-201ENST00000444542 271 ntBASIC3.02□□□□□ -1.93
CSTF3Q12996 AC083798.1-201ENST00000472671 131 ntBASIC3.02□□□□□ -1.93
CSTF3Q12996 AL163973.1-201ENST00000484753 577 ntBASIC3.02□□□□□ -1.93
CSTF3Q12996 AC022493.1-201ENST00000492984 337 ntBASIC3.02□□□□□ -1.93
CSTF3Q12996 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.02□□□□□ -1.93
CSTF3Q12996 RAC1P5-201ENST00000512182 576 ntBASIC3.02□□□□□ -1.93
CSTF3Q12996 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.02□□□□□ -1.93
CSTF3Q12996 AC112206.3-201ENST00000514578 389 ntBASIC3.02□□□□□ -1.93
CSTF3Q12996 Y_RNA.693-201ENST00000516641 110 ntBASIC3.02□□□□□ -1.93
CSTF3Q12996 RNU6-1183P-201ENST00000517054 60 ntBASIC3.02□□□□□ -1.93
CSTF3Q12996 AP005435.4-201ENST00000529514 284 ntBASIC3.02□□□□□ -1.93
CSTF3Q12996 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.02□□□□□ -1.93
CSTF3Q12996 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.02□□□□□ -1.93
CSTF3Q12996 AC027807.1-201ENST00000559921 996 ntBASIC3.02□□□□□ -1.93
CSTF3Q12996 HMGB1P33-201ENST00000563485 527 ntBASIC3.02□□□□□ -1.93
CSTF3Q12996 MIR5692A1-201ENST00000580523 69 ntBASIC3.02□□□□□ -1.93
CSTF3Q12996 U6.42-201ENST00000618440 107 ntBASIC3.02□□□□□ -1.93
CSTF3Q12996 AC110079.1-202ENST00000635213 138 ntBASIC3.02□□□□□ -1.93
CSTF3Q12996 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CSTF3Q12996 AC008669.1-201ENST00000565823 2178 ntBASIC3.02□□□□□ -1.93
CSTF3Q12996 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CSTF3Q12996 ELF2P3-201ENST00000445099 1506 ntBASIC3.02□□□□□ -1.93
CSTF3Q12996 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CSTF3Q12996 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.02□□□□□ -1.93
CSTF3Q12996 MTND4P14-201ENST00000435799 1354 ntBASIC3.01□□□□□ -1.93
CSTF3Q12996 AC008264.2-201ENST00000610193 3731 ntBASIC3.01□□□□□ -1.93
CSTF3Q12996 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CSTF3Q12996 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.01□□□□□ -1.93
CSTF3Q12996 RNA5SP72-201ENST00000364442 117 ntBASIC3.01□□□□□ -1.93
CSTF3Q12996 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CSTF3Q12996 SNORA75B-201ENST00000384053 137 ntBASIC3.01□□□□□ -1.93
CSTF3Q12996 RNU6-1179P-201ENST00000384667 107 ntBASIC3.01□□□□□ -1.93
CSTF3Q12996 MIR181A1-201ENST00000385026 110 ntBASIC3.01□□□□□ -1.93
CSTF3Q12996 RNU6-903P-201ENST00000391270 109 ntBASIC3.01□□□□□ -1.93
CSTF3Q12996 SNORA40C-201ENST00000391285 128 ntBASIC3.01□□□□□ -1.93
CSTF3Q12996 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.01□□□□□ -1.93
CSTF3Q12996 AL590002.1-201ENST00000406554 418 ntBASIC3.01□□□□□ -1.93
CSTF3Q12996 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.01□□□□□ -1.93
CSTF3Q12996 RNU2-49P-201ENST00000410666 184 ntBASIC3.01□□□□□ -1.93
CSTF3Q12996 AF274854.1-201ENST00000413236 615 ntBASIC3.01□□□□□ -1.93
CSTF3Q12996 RPL21P90-201ENST00000415692 466 ntBASIC3.01□□□□□ -1.93
CSTF3Q12996 AL139281.1-201ENST00000422120 335 ntBASIC3.01□□□□□ -1.93
CSTF3Q12996 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CSTF3Q12996 MYL8P-204ENST00000431574 518 ntBASIC3.01□□□□□ -1.93
CSTF3Q12996 GTF2IP20-201ENST00000431663 360 ntBASIC3.01□□□□□ -1.93
CSTF3Q12996 AC098831.1-201ENST00000440661 216 ntBASIC3.01□□□□□ -1.93
CSTF3Q12996 AC073415.1-201ENST00000449240 153 ntBASIC3.01□□□□□ -1.93
CSTF3Q12996 CACYBPP2-201ENST00000453625 678 ntBASIC3.01□□□□□ -1.93
CSTF3Q12996 AL583843.1-201ENST00000456070 346 ntBASIC3.01□□□□□ -1.93
CSTF3Q12996 SNRPFP3-201ENST00000457792 225 ntBASIC3.01□□□□□ -1.93
CSTF3Q12996 RNU6-261P-201ENST00000459506 102 ntBASIC3.01□□□□□ -1.93
CSTF3Q12996 RPS29P12-201ENST00000460178 152 ntBASIC3.01□□□□□ -1.93
CSTF3Q12996 AC109925.1-201ENST00000478069 331 ntBASIC3.01□□□□□ -1.93
CSTF3Q12996 RPS27P26-201ENST00000494583 239 ntBASIC3.01□□□□□ -1.93
CSTF3Q12996 AC026801.1-201ENST00000497178 464 ntBASIC3.01□□□□□ -1.93
CSTF3Q12996 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.01□□□□□ -1.93
CSTF3Q12996 SLC25A15P5-201ENST00000508033 253 ntBASIC3.01□□□□□ -1.93
CSTF3Q12996 RNU6-1178P-201ENST00000516674 107 ntBASIC3.01□□□□□ -1.93
CSTF3Q12996 SUB1P1-201ENST00000524415 382 ntBASIC3.01□□□□□ -1.93
CSTF3Q12996 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.01□□□□□ -1.93
CSTF3Q12996 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.01□□□□□ -1.93
CSTF3Q12996 AL512310.1-201ENST00000548639 172 ntBASIC3.01□□□□□ -1.93
CSTF3Q12996 HIF1AP1-201ENST00000553642 175 ntBASIC3.01□□□□□ -1.93
CSTF3Q12996 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.01□□□□□ -1.93
CSTF3Q12996 ZNF519P2-201ENST00000557032 169 ntBASIC3.01□□□□□ -1.93
CSTF3Q12996 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.01□□□□□ -1.93
CSTF3Q12996 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.01□□□□□ -1.93
CSTF3Q12996 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.01□□□□□ -1.93
CSTF3Q12996 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.01□□□□□ -1.93
CSTF3Q12996 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.01□□□□□ -1.93
CSTF3Q12996 AL627309.6-201ENST00000606857 840 ntBASIC3.01□□□□□ -1.93
CSTF3Q12996 AC093788.1-201ENST00000609356 927 ntBASIC3.01□□□□□ -1.93
CSTF3Q12996 AC069200.1-201ENST00000609511 323 ntBASIC3.01□□□□□ -1.93
CSTF3Q12996 AC013562.2-201ENST00000611632 603 ntBASIC3.01□□□□□ -1.93
CSTF3Q12996 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.01□□□□□ -1.93
CSTF3Q12996 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.01□□□□□ -1.93
CSTF3Q12996 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms