Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 AC097655.1-201ENST00000635075 318 ntBASIC1.49□□□□□ -2.17
FOXF1Q12946 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC1.49□□□□□ -2.17
FOXF1Q12946 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
FOXF1Q12946 ZNF876P-202ENST00000398732 1485 ntBASIC1.49□□□□□ -2.17
FOXF1Q12946 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
FOXF1Q12946 AC010889.1-201ENST00000566193 2666 ntBASIC1.48□□□□□ -2.17
FOXF1Q12946 RNU6-778P-201ENST00000363269 103 ntBASIC1.48□□□□□ -2.17
FOXF1Q12946 RNU6-289P-201ENST00000364093 107 ntBASIC1.48□□□□□ -2.17
FOXF1Q12946 RNU6-853P-201ENST00000364306 107 ntBASIC1.48□□□□□ -2.17
FOXF1Q12946 RNA5SP190-201ENST00000365222 118 ntBASIC1.48□□□□□ -2.17
FOXF1Q12946 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
FOXF1Q12946 MIR19A-201ENST00000384878 82 ntBASIC1.48□□□□□ -2.17
FOXF1Q12946 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
FOXF1Q12946 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
FOXF1Q12946 RN7SKP101-201ENST00000411376 320 ntBASIC1.48□□□□□ -2.17
FOXF1Q12946 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.48□□□□□ -2.17
FOXF1Q12946 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.48□□□□□ -2.17
FOXF1Q12946 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.48□□□□□ -2.17
FOXF1Q12946 ELOCP9-201ENST00000418624 239 ntBASIC1.48□□□□□ -2.17
FOXF1Q12946 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC1.48□□□□□ -2.17
FOXF1Q12946 TOMM20P4-201ENST00000427861 435 ntBASIC1.48□□□□□ -2.17
FOXF1Q12946 AC244035.1-201ENST00000430042 390 ntBASIC1.48□□□□□ -2.17
FOXF1Q12946 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC1.48□□□□□ -2.17
FOXF1Q12946 MTCO2P20-201ENST00000437339 673 ntBASIC1.48□□□□□ -2.17
FOXF1Q12946 SSXP1-201ENST00000453640 473 ntBASIC1.48□□□□□ -2.17
FOXF1Q12946 RNU7-59P-201ENST00000459101 61 ntBASIC1.48□□□□□ -2.17
FOXF1Q12946 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.48□□□□□ -2.17
FOXF1Q12946 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.48□□□□□ -2.17
FOXF1Q12946 AHI1-208ENST00000488690 712 ntTSL 5 BASIC1.48□□□□□ -2.17
FOXF1Q12946 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC1.48□□□□□ -2.17
FOXF1Q12946 RPS27AP10-201ENST00000496103 208 ntBASIC1.48□□□□□ -2.17
FOXF1Q12946 HMGB3P17-201ENST00000504195 649 ntBASIC1.48□□□□□ -2.17
FOXF1Q12946 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.48□□□□□ -2.17
FOXF1Q12946 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC1.48□□□□□ -2.17
FOXF1Q12946 SNORD19.2-201ENST00000516978 73 ntBASIC1.48□□□□□ -2.17
FOXF1Q12946 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.48□□□□□ -2.17
FOXF1Q12946 AC105185.1-201ENST00000518705 535 ntBASIC1.48□□□□□ -2.17
FOXF1Q12946 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC1.48□□□□□ -2.17
FOXF1Q12946 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.48□□□□□ -2.17
FOXF1Q12946 CBX3P4-201ENST00000538909 354 ntBASIC1.48□□□□□ -2.17
FOXF1Q12946 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC1.48□□□□□ -2.17
FOXF1Q12946 AC093012.1-202ENST00000549403 582 ntBASIC1.48□□□□□ -2.17
FOXF1Q12946 DEFB122-202ENST00000569013 197 ntBASIC1.48□□□□□ -2.17
FOXF1Q12946 MIR4255-201ENST00000579351 72 ntBASIC1.48□□□□□ -2.17
FOXF1Q12946 MIR3683-201ENST00000580847 82 ntBASIC1.48□□□□□ -2.17
FOXF1Q12946 AC091057.3-201ENST00000602684 733 ntBASIC1.48□□□□□ -2.17
FOXF1Q12946 AL391813.1-201ENST00000603098 260 ntBASIC1.48□□□□□ -2.17
FOXF1Q12946 AP000403.1-201ENST00000603349 851 ntBASIC1.48□□□□□ -2.17
FOXF1Q12946 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
FOXF1Q12946 AC097478.2-201ENST00000610572 514 ntBASIC1.48□□□□□ -2.17
FOXF1Q12946 MIR6715A-201ENST00000615929 79 ntBASIC1.48□□□□□ -2.17
FOXF1Q12946 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.48□□□□□ -2.17
FOXF1Q12946 AL445984.1-201ENST00000637834 659 ntBASIC1.48□□□□□ -2.17
FOXF1Q12946 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.48□□□□□ -2.17
FOXF1Q12946 UBE2L2-201ENST00000254302 429 ntBASIC1.47□□□□□ -2.17
FOXF1Q12946 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
FOXF1Q12946 Y_RNA.245-201ENST00000364493 95 ntBASIC1.47□□□□□ -2.17
FOXF1Q12946 AL359634.1-202ENST00000404721 284 ntBASIC1.47□□□□□ -2.17
FOXF1Q12946 CIR1P3-201ENST00000405137 479 ntBASIC1.47□□□□□ -2.17
FOXF1Q12946 MIR320C1-201ENST00000408566 88 ntBASIC1.47□□□□□ -2.17
FOXF1Q12946 AL359704.1-201ENST00000411586 781 ntBASIC1.47□□□□□ -2.17
FOXF1Q12946 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.47□□□□□ -2.17
FOXF1Q12946 ISCA1P1-201ENST00000426679 387 ntBASIC1.47□□□□□ -2.17
FOXF1Q12946 USP9YP24-201ENST00000434374 697 ntBASIC1.47□□□□□ -2.17
FOXF1Q12946 MTND1P28-201ENST00000435623 950 ntBASIC1.47□□□□□ -2.17
FOXF1Q12946 AC005094.1-201ENST00000440420 368 ntBASIC1.47□□□□□ -2.17
FOXF1Q12946 AC016691.1-201ENST00000441321 413 ntBASIC1.47□□□□□ -2.17
FOXF1Q12946 USP9YP17-201ENST00000444617 696 ntBASIC1.47□□□□□ -2.17
FOXF1Q12946 EXOSC3P1-201ENST00000448649 500 ntBASIC1.47□□□□□ -2.17
FOXF1Q12946 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.47□□□□□ -2.17
FOXF1Q12946 RPL12P25-201ENST00000455592 494 ntBASIC1.47□□□□□ -2.17
FOXF1Q12946 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC1.47□□□□□ -2.17
FOXF1Q12946 SNORD13-201ENST00000459299 104 ntBASIC1.47□□□□□ -2.17
FOXF1Q12946 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC1.47□□□□□ -2.17
FOXF1Q12946 MRPS17P9-201ENST00000511924 393 ntBASIC1.47□□□□□ -2.17
FOXF1Q12946 SNORA31.3-201ENST00000516029 96 ntBASIC1.47□□□□□ -2.17
FOXF1Q12946 MIR892C-201ENST00000516410 77 ntBASIC1.47□□□□□ -2.17
FOXF1Q12946 RNA5SP290-201ENST00000517133 127 ntBASIC1.47□□□□□ -2.17
FOXF1Q12946 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.47□□□□□ -2.17
FOXF1Q12946 AC084851.1-201ENST00000529105 249 ntBASIC1.47□□□□□ -2.17
FOXF1Q12946 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
FOXF1Q12946 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.47□□□□□ -2.17
FOXF1Q12946 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.47□□□□□ -2.17
FOXF1Q12946 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.47□□□□□ -2.17
FOXF1Q12946 MIR4509-3-201ENST00000578671 94 ntBASIC1.47□□□□□ -2.17
FOXF1Q12946 AC060771.1-201ENST00000582031 164 ntBASIC1.47□□□□□ -2.17
FOXF1Q12946 MIR3199-1-201ENST00000582434 88 ntBASIC1.47□□□□□ -2.17
FOXF1Q12946 MIR4509-2-201ENST00000583920 94 ntBASIC1.47□□□□□ -2.17
FOXF1Q12946 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
FOXF1Q12946 VN1R82P-201ENST00000601481 356 ntBASIC1.47□□□□□ -2.17
FOXF1Q12946 AC025165.5-201ENST00000602802 578 ntBASIC1.47□□□□□ -2.17
FOXF1Q12946 AL355598.1-201ENST00000604169 202 ntBASIC1.47□□□□□ -2.17
FOXF1Q12946 AC104763.2-201ENST00000604179 382 ntBASIC1.47□□□□□ -2.17
FOXF1Q12946 AL450336.1-201ENST00000605180 586 ntBASIC1.47□□□□□ -2.17
FOXF1Q12946 AL021997.1-201ENST00000605757 193 ntBASIC1.47□□□□□ -2.17
FOXF1Q12946 DUSP12P1-201ENST00000612874 516 ntBASIC1.47□□□□□ -2.17
FOXF1Q12946 AL161423.1-201ENST00000613700 262 ntBASIC1.47□□□□□ -2.17
FOXF1Q12946 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC1.47□□□□□ -2.17
FOXF1Q12946 MIR4509-1-201ENST00000618224 94 ntBASIC1.47□□□□□ -2.17
FOXF1Q12946 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms