Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.19□□□□□ -2.06
RAB40BQ12829 RPL7P34-201ENST00000433316 712 ntBASIC2.19□□□□□ -2.06
RAB40BQ12829 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.19□□□□□ -2.06
RAB40BQ12829 AL078601.1-201ENST00000444542 271 ntBASIC2.19□□□□□ -2.06
RAB40BQ12829 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
RAB40BQ12829 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.19□□□□□ -2.06
RAB40BQ12829 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.19□□□□□ -2.06
RAB40BQ12829 AC073901.1-201ENST00000462471 408 ntBASIC2.19□□□□□ -2.06
RAB40BQ12829 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC2.19□□□□□ -2.06
RAB40BQ12829 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.19□□□□□ -2.06
RAB40BQ12829 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.19□□□□□ -2.06
RAB40BQ12829 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.19□□□□□ -2.06
RAB40BQ12829 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC2.19□□□□□ -2.06
RAB40BQ12829 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
RAB40BQ12829 AC135628.1-201ENST00000568867 534 ntBASIC2.19□□□□□ -2.06
RAB40BQ12829 MIR1273C-201ENST00000578669 77 ntBASIC2.19□□□□□ -2.06
RAB40BQ12829 MIR4765-201ENST00000585007 77 ntBASIC2.19□□□□□ -2.06
RAB40BQ12829 NIFKP6-201ENST00000598115 845 ntBASIC2.19□□□□□ -2.06
RAB40BQ12829 AC008121.1-201ENST00000603244 268 ntBASIC2.19□□□□□ -2.06
RAB40BQ12829 AL451064.1-201ENST00000607718 471 ntBASIC2.19□□□□□ -2.06
RAB40BQ12829 AC067747.1-201ENST00000608026 250 ntBASIC2.19□□□□□ -2.06
RAB40BQ12829 MIR6134-201ENST00000617606 109 ntBASIC2.19□□□□□ -2.06
RAB40BQ12829 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
RAB40BQ12829 AC006386.2-201ENST00000624491 75 ntBASIC2.19□□□□□ -2.06
RAB40BQ12829 AC012005.1-201ENST00000624575 75 ntBASIC2.19□□□□□ -2.06
RAB40BQ12829 FO624990.1-201ENST00000636373 85 ntBASIC2.19□□□□□ -2.06
RAB40BQ12829 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.19□□□□□ -2.06
RAB40BQ12829 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
RAB40BQ12829 MTND5P30-201ENST00000452896 1731 ntBASIC2.19□□□□□ -2.06
RAB40BQ12829 CDC27P3-201ENST00000635418 1910 ntBASIC2.19□□□□□ -2.06
RAB40BQ12829 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
RAB40BQ12829 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.18□□□□□ -2.06
RAB40BQ12829 AL365361.1-201ENST00000566942 3481 ntBASIC2.18□□□□□ -2.06
RAB40BQ12829 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.18□□□□□ -2.06
RAB40BQ12829 RNY1P12-201ENST00000364251 105 ntBASIC2.18□□□□□ -2.06
RAB40BQ12829 SNORD114-30-201ENST00000364448 72 ntBASIC2.18□□□□□ -2.06
RAB40BQ12829 RNU6-1280P-201ENST00000365211 107 ntBASIC2.18□□□□□ -2.06
RAB40BQ12829 RNU6-898P-201ENST00000365627 104 ntBASIC2.18□□□□□ -2.06
RAB40BQ12829 SNORA40C-201ENST00000391285 128 ntBASIC2.18□□□□□ -2.06
RAB40BQ12829 RPS3AP36-201ENST00000398190 775 ntBASIC2.18□□□□□ -2.06
RAB40BQ12829 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC2.18□□□□□ -2.06
RAB40BQ12829 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.18□□□□□ -2.06
RAB40BQ12829 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC2.18□□□□□ -2.06
RAB40BQ12829 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.18□□□□□ -2.06
RAB40BQ12829 BTF3P15-201ENST00000455606 336 ntBASIC2.18□□□□□ -2.06
RAB40BQ12829 RNU7-26P-201ENST00000458980 63 ntBASIC2.18□□□□□ -2.06
RAB40BQ12829 AP001324.2-201ENST00000461163 319 ntBASIC2.18□□□□□ -2.06
RAB40BQ12829 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.18□□□□□ -2.06
RAB40BQ12829 AC010486.2-201ENST00000505572 483 ntBASIC2.18□□□□□ -2.06
RAB40BQ12829 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.18□□□□□ -2.06
RAB40BQ12829 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.18□□□□□ -2.06
RAB40BQ12829 AC107222.1-201ENST00000510899 637 ntBASIC2.18□□□□□ -2.06
RAB40BQ12829 AC008716.1-201ENST00000511084 513 ntBASIC2.18□□□□□ -2.06
RAB40BQ12829 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.18□□□□□ -2.06
RAB40BQ12829 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.18□□□□□ -2.06
RAB40BQ12829 EIF4BP1-201ENST00000554881 351 ntBASIC2.18□□□□□ -2.06
RAB40BQ12829 LINC00933-203ENST00000559812 219 ntBASIC2.18□□□□□ -2.06
RAB40BQ12829 AC106782.4-201ENST00000568264 210 ntBASIC2.18□□□□□ -2.06
RAB40BQ12829 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.18□□□□□ -2.06
RAB40BQ12829 RPL12P50-201ENST00000603116 116 ntBASIC2.18□□□□□ -2.06
RAB40BQ12829 AL158032.1-201ENST00000605401 106 ntBASIC2.18□□□□□ -2.06
RAB40BQ12829 uc_338.14-201ENST00000613162 166 ntBASIC2.18□□□□□ -2.06
RAB40BQ12829 AL359547.2-201ENST00000615810 418 ntBASIC2.18□□□□□ -2.06
RAB40BQ12829 AC108479.2-201ENST00000617314 601 ntBASIC2.18□□□□□ -2.06
RAB40BQ12829 AP003485.2-201ENST00000623636 610 ntBASIC2.18□□□□□ -2.06
RAB40BQ12829 MIR7157-201ENST00000635801 60 ntBASIC2.18□□□□□ -2.06
RAB40BQ12829 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.18□□□□□ -2.06
RAB40BQ12829 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
RAB40BQ12829 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.18□□□□□ -2.06
RAB40BQ12829 AC005336.3-201ENST00000623833 2679 ntBASIC2.18□□□□□ -2.06
RAB40BQ12829 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.18□□□□□ -2.06
RAB40BQ12829 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
RAB40BQ12829 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.17□□□□□ -2.06
RAB40BQ12829 OR5J1P-201ENST00000313544 939 ntBASIC2.17□□□□□ -2.06
RAB40BQ12829 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
RAB40BQ12829 RNU6-395P-201ENST00000365662 106 ntBASIC2.17□□□□□ -2.06
RAB40BQ12829 SNORA20.2-201ENST00000383922 131 ntBASIC2.17□□□□□ -2.06
RAB40BQ12829 RNU6-641P-201ENST00000384006 107 ntBASIC2.17□□□□□ -2.06
RAB40BQ12829 RNU6-1072P-201ENST00000384703 107 ntBASIC2.17□□□□□ -2.06
RAB40BQ12829 RNU6-443P-201ENST00000384780 107 ntBASIC2.17□□□□□ -2.06
RAB40BQ12829 MIR558-201ENST00000384920 94 ntBASIC2.17□□□□□ -2.06
RAB40BQ12829 MIR634-201ENST00000385208 97 ntBASIC2.17□□□□□ -2.06
RAB40BQ12829 MT-TH-201ENST00000387441 69 ntBASIC2.17□□□□□ -2.06
RAB40BQ12829 RNU6-220P-201ENST00000390919 107 ntBASIC2.17□□□□□ -2.06
RAB40BQ12829 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
RAB40BQ12829 RNU2-39P-201ENST00000410604 198 ntBASIC2.17□□□□□ -2.06
RAB40BQ12829 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.17□□□□□ -2.06
RAB40BQ12829 CYCSP46-201ENST00000423569 204 ntBASIC2.17□□□□□ -2.06
RAB40BQ12829 Z98742.2-201ENST00000431564 187 ntBASIC2.17□□□□□ -2.06
RAB40BQ12829 RPS6P15-201ENST00000431996 751 ntBASIC2.17□□□□□ -2.06
RAB40BQ12829 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.17□□□□□ -2.06
RAB40BQ12829 MICF-203ENST00000432679 129 ntBASIC2.17□□□□□ -2.06
RAB40BQ12829 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.17□□□□□ -2.06
RAB40BQ12829 FABP5P14-201ENST00000437273 393 ntBASIC2.17□□□□□ -2.06
RAB40BQ12829 AL445567.1-201ENST00000439121 144 ntBASIC2.17□□□□□ -2.06
RAB40BQ12829 MTND6P13-201ENST00000443510 523 ntBASIC2.17□□□□□ -2.06
RAB40BQ12829 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC2.17□□□□□ -2.06
RAB40BQ12829 AC009961.3-201ENST00000449832 765 ntBASIC2.17□□□□□ -2.06
RAB40BQ12829 AC003071.1-201ENST00000451219 789 ntBASIC2.17□□□□□ -2.06
RAB40BQ12829 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms