Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
HMGCS1Q01581 RNU1-73P-201ENST00000383971 164 ntBASIC2.06□□□□□ -2.08
HMGCS1Q01581 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
HMGCS1Q01581 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
HMGCS1Q01581 MIR888-201ENST00000401186 77 ntBASIC2.06□□□□□ -2.08
HMGCS1Q01581 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.06□□□□□ -2.08
HMGCS1Q01581 AL118520.1-201ENST00000450770 291 ntBASIC2.06□□□□□ -2.08
HMGCS1Q01581 SSXP1-201ENST00000453640 473 ntBASIC2.06□□□□□ -2.08
HMGCS1Q01581 RPL30P6-201ENST00000475925 342 ntBASIC2.06□□□□□ -2.08
HMGCS1Q01581 AC109486.1-201ENST00000486833 374 ntBASIC2.06□□□□□ -2.08
HMGCS1Q01581 RPS27AP10-201ENST00000496103 208 ntBASIC2.06□□□□□ -2.08
HMGCS1Q01581 AC112204.1-201ENST00000502591 103 ntBASIC2.06□□□□□ -2.08
HMGCS1Q01581 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC2.06□□□□□ -2.08
HMGCS1Q01581 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC2.06□□□□□ -2.08
HMGCS1Q01581 RNA5SP200-201ENST00000516360 103 ntBASIC2.06□□□□□ -2.08
HMGCS1Q01581 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.06□□□□□ -2.08
HMGCS1Q01581 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.06□□□□□ -2.08
HMGCS1Q01581 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.06□□□□□ -2.08
HMGCS1Q01581 AL359212.1-201ENST00000556608 614 ntBASIC2.06□□□□□ -2.08
HMGCS1Q01581 AC109446.2-201ENST00000567872 497 ntBASIC2.06□□□□□ -2.08
HMGCS1Q01581 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.06□□□□□ -2.08
HMGCS1Q01581 AL022161.1-201ENST00000604390 213 ntBASIC2.06□□□□□ -2.08
HMGCS1Q01581 AC007363.1-201ENST00000604736 620 ntBASIC2.06□□□□□ -2.08
HMGCS1Q01581 AC121334.2-201ENST00000605387 271 ntBASIC2.06□□□□□ -2.08
HMGCS1Q01581 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.06□□□□□ -2.08
HMGCS1Q01581 AC091304.6-201ENST00000619761 202 ntBASIC2.06□□□□□ -2.08
HMGCS1Q01581 MIR6132-201ENST00000622083 109 ntBASIC2.06□□□□□ -2.08
HMGCS1Q01581 U2.21-201ENST00000637295 81 ntBASIC2.06□□□□□ -2.08
HMGCS1Q01581 AC080128.1-201ENST00000474389 1917 ntBASIC2.06□□□□□ -2.08
HMGCS1Q01581 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
HMGCS1Q01581 AC092104.1-201ENST00000497346 1441 ntBASIC2.06□□□□□ -2.08
HMGCS1Q01581 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
HMGCS1Q01581 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.06□□□□□ -2.08
HMGCS1Q01581 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.05□□□□□ -2.08
HMGCS1Q01581 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
HMGCS1Q01581 RNU6-511P-201ENST00000363496 107 ntBASIC2.05□□□□□ -2.08
HMGCS1Q01581 RNU5F-7P-201ENST00000363696 115 ntBASIC2.05□□□□□ -2.08
HMGCS1Q01581 RNA5SP126-201ENST00000365092 109 ntBASIC2.05□□□□□ -2.08
HMGCS1Q01581 SNORD115.1-201ENST00000391109 76 ntBASIC2.05□□□□□ -2.08
HMGCS1Q01581 SNORA3.2-201ENST00000408221 125 ntBASIC2.05□□□□□ -2.08
HMGCS1Q01581 Y_RNA.608-201ENST00000410647 95 ntBASIC2.05□□□□□ -2.08
HMGCS1Q01581 RNU2-49P-201ENST00000410666 184 ntBASIC2.05□□□□□ -2.08
HMGCS1Q01581 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC2.05□□□□□ -2.08
HMGCS1Q01581 RPL17P12-201ENST00000413391 526 ntBASIC2.05□□□□□ -2.08
HMGCS1Q01581 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.05□□□□□ -2.08
HMGCS1Q01581 AL135786.1-201ENST00000415892 214 ntBASIC2.05□□□□□ -2.08
HMGCS1Q01581 ZNF90P2-204ENST00000419323 1075 ntBASIC2.05□□□□□ -2.08
HMGCS1Q01581 RPS15AP12-201ENST00000419498 388 ntBASIC2.05□□□□□ -2.08
HMGCS1Q01581 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.05□□□□□ -2.08
HMGCS1Q01581 MTND4P20-201ENST00000424125 869 ntBASIC2.05□□□□□ -2.08
HMGCS1Q01581 AC104651.1-201ENST00000427559 735 ntBASIC2.05□□□□□ -2.08
HMGCS1Q01581 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.05□□□□□ -2.08
HMGCS1Q01581 AL356320.1-201ENST00000429616 163 ntBASIC2.05□□□□□ -2.08
HMGCS1Q01581 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.05□□□□□ -2.08
HMGCS1Q01581 GPM6BP2-201ENST00000432046 144 ntBASIC2.05□□□□□ -2.08
HMGCS1Q01581 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.05□□□□□ -2.08
HMGCS1Q01581 RPS15AP5-201ENST00000436276 388 ntBASIC2.05□□□□□ -2.08
HMGCS1Q01581 IPO7P1-201ENST00000442031 636 ntBASIC2.05□□□□□ -2.08
HMGCS1Q01581 NEFMP1-201ENST00000443423 1006 ntBASIC2.05□□□□□ -2.08
HMGCS1Q01581 GPM6BP1-201ENST00000446387 144 ntBASIC2.05□□□□□ -2.08
HMGCS1Q01581 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC2.05□□□□□ -2.08
HMGCS1Q01581 FABP5P15-201ENST00000453566 214 ntBASIC2.05□□□□□ -2.08
HMGCS1Q01581 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.05□□□□□ -2.08
HMGCS1Q01581 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC2.05□□□□□ -2.08
HMGCS1Q01581 AP000797.1-201ENST00000478870 387 ntBASIC2.05□□□□□ -2.08
HMGCS1Q01581 AC139453.3-201ENST00000493276 369 ntBASIC2.05□□□□□ -2.08
HMGCS1Q01581 AC008549.1-201ENST00000512900 643 ntBASIC2.05□□□□□ -2.08
HMGCS1Q01581 RNU5F-8P-201ENST00000515941 111 ntBASIC2.05□□□□□ -2.08
HMGCS1Q01581 SCARNA16.3-201ENST00000516595 184 ntBASIC2.05□□□□□ -2.08
HMGCS1Q01581 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
HMGCS1Q01581 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.05□□□□□ -2.08
HMGCS1Q01581 AC091544.4-201ENST00000555268 342 ntBASIC2.05□□□□□ -2.08
HMGCS1Q01581 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.05□□□□□ -2.08
HMGCS1Q01581 AC135628.1-201ENST00000568867 534 ntBASIC2.05□□□□□ -2.08
HMGCS1Q01581 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.05□□□□□ -2.08
HMGCS1Q01581 AC005332.10-201ENST00000612725 619 ntBASIC2.05□□□□□ -2.08
HMGCS1Q01581 AC122133.1-201ENST00000613964 233 ntBASIC2.05□□□□□ -2.08
HMGCS1Q01581 AF246928.1-201ENST00000623768 87 ntBASIC2.05□□□□□ -2.08
HMGCS1Q01581 MTND4P27-201ENST00000450813 1354 ntBASIC2.05□□□□□ -2.08
HMGCS1Q01581 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.05□□□□□ -2.08
HMGCS1Q01581 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.05□□□□□ -2.08
HMGCS1Q01581 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.05□□□□□ -2.08
HMGCS1Q01581 AC010329.5-201ENST00000623497 2174 ntBASIC2.05□□□□□ -2.08
HMGCS1Q01581 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.05□□□□□ -2.08
HMGCS1Q01581 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
HMGCS1Q01581 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
HMGCS1Q01581 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
HMGCS1Q01581 RNU6-778P-201ENST00000363269 103 ntBASIC2.04□□□□□ -2.08
HMGCS1Q01581 RNU6-288P-201ENST00000363690 104 ntBASIC2.04□□□□□ -2.08
HMGCS1Q01581 RNA5SP160-201ENST00000364866 120 ntBASIC2.04□□□□□ -2.08
HMGCS1Q01581 RNU5E-5P-201ENST00000365379 116 ntBASIC2.04□□□□□ -2.08
HMGCS1Q01581 SMIM11P1-201ENST00000369586 178 ntBASIC2.04□□□□□ -2.08
HMGCS1Q01581 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
HMGCS1Q01581 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
HMGCS1Q01581 SNORA48.3-201ENST00000391081 134 ntBASIC2.04□□□□□ -2.08
HMGCS1Q01581 AL031577.2-201ENST00000404133 280 ntBASIC2.04□□□□□ -2.08
HMGCS1Q01581 RNU2-62P-201ENST00000410868 191 ntBASIC2.04□□□□□ -2.08
HMGCS1Q01581 RNU2-68P-201ENST00000410878 191 ntBASIC2.04□□□□□ -2.08
HMGCS1Q01581 RNU6-1328P-201ENST00000410938 106 ntBASIC2.04□□□□□ -2.08
HMGCS1Q01581 USP9YP27-201ENST00000418455 438 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 145.1 ms