Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 AL133393.1-201ENST00000603277 287 ntBASIC2.86□□□□□ -1.95
CDK3Q00526 AL355598.1-201ENST00000604169 202 ntBASIC2.86□□□□□ -1.95
CDK3Q00526 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.86□□□□□ -1.95
CDK3Q00526 AC139792.3-201ENST00000623525 224 ntBASIC2.86□□□□□ -1.95
CDK3Q00526 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.86□□□□□ -1.95
CDK3Q00526 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CDK3Q00526 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.86□□□□□ -1.95
CDK3Q00526 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CDK3Q00526 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CDK3Q00526 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.86□□□□□ -1.95
CDK3Q00526 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CDK3Q00526 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CDK3Q00526 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CDK3Q00526 NACAP2-201ENST00000318548 624 ntBASIC2.85□□□□□ -1.95
CDK3Q00526 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
CDK3Q00526 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CDK3Q00526 Y_RNA.3-201ENST00000362331 103 ntBASIC2.85□□□□□ -1.95
CDK3Q00526 Y_RNA.33-201ENST00000362591 102 ntBASIC2.85□□□□□ -1.95
CDK3Q00526 Y_RNA.381-201ENST00000365666 102 ntBASIC2.85□□□□□ -1.95
CDK3Q00526 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CDK3Q00526 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
CDK3Q00526 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.85□□□□□ -1.95
CDK3Q00526 Y_RNA.409-201ENST00000383990 98 ntBASIC2.85□□□□□ -1.95
CDK3Q00526 RNU6-1027P-201ENST00000383998 107 ntBASIC2.85□□□□□ -1.95
CDK3Q00526 RNU6-116P-201ENST00000384042 109 ntBASIC2.85□□□□□ -1.95
CDK3Q00526 MTCO3P40-201ENST00000392516 676 ntBASIC2.85□□□□□ -1.95
CDK3Q00526 AL591416.1-201ENST00000404015 867 ntBASIC2.85□□□□□ -1.95
CDK3Q00526 OR6C66P-201ENST00000414917 930 ntBASIC2.85□□□□□ -1.95
CDK3Q00526 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CDK3Q00526 AL645937.1-202ENST00000421799 937 ntBASIC2.85□□□□□ -1.95
CDK3Q00526 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC2.85□□□□□ -1.95
CDK3Q00526 MTCO3P30-201ENST00000426425 670 ntBASIC2.85□□□□□ -1.95
CDK3Q00526 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.85□□□□□ -1.95
CDK3Q00526 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.85□□□□□ -1.95
CDK3Q00526 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.85□□□□□ -1.95
CDK3Q00526 MTND1P18-201ENST00000448191 573 ntBASIC2.85□□□□□ -1.95
CDK3Q00526 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC2.85□□□□□ -1.95
CDK3Q00526 NIPA2P5-201ENST00000452282 464 ntBASIC2.85□□□□□ -1.95
CDK3Q00526 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.85□□□□□ -1.95
CDK3Q00526 EIF4EP3-201ENST00000498782 656 ntBASIC2.85□□□□□ -1.95
CDK3Q00526 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.85□□□□□ -1.95
CDK3Q00526 AC117522.3-201ENST00000507974 584 ntBASIC2.85□□□□□ -1.95
CDK3Q00526 AC010265.1-201ENST00000513509 211 ntBASIC2.85□□□□□ -1.95
CDK3Q00526 RN7SKP43-201ENST00000516173 320 ntBASIC2.85□□□□□ -1.95
CDK3Q00526 SCARNA13-201ENST00000516672 275 ntBASIC2.85□□□□□ -1.95
CDK3Q00526 AC025755.1-201ENST00000521306 278 ntBASIC2.85□□□□□ -1.95
CDK3Q00526 OR5BN1P-201ENST00000532955 829 ntBASIC2.85□□□□□ -1.95
CDK3Q00526 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.85□□□□□ -1.95
CDK3Q00526 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.85□□□□□ -1.95
CDK3Q00526 AC008752.3-201ENST00000588113 712 ntBASIC2.85□□□□□ -1.95
CDK3Q00526 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.85□□□□□ -1.95
CDK3Q00526 AC024153.1-201ENST00000603103 365 ntBASIC2.85□□□□□ -1.95
CDK3Q00526 AP001486.3-201ENST00000615334 372 ntBASIC2.85□□□□□ -1.95
CDK3Q00526 AC005609.4-201ENST00000625071 447 ntBASIC2.85□□□□□ -1.95
CDK3Q00526 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CDK3Q00526 U6.99-201ENST00000637524 83 ntBASIC2.85□□□□□ -1.95
CDK3Q00526 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
CDK3Q00526 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.85□□□□□ -1.95
CDK3Q00526 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CDK3Q00526 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CDK3Q00526 AC091564.4-201ENST00000533934 2194 ntBASIC2.84□□□□□ -1.95
CDK3Q00526 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.84□□□□□ -1.95
CDK3Q00526 MIR148B-201ENST00000362252 99 ntBASIC2.84□□□□□ -1.95
CDK3Q00526 RNU6-395P-201ENST00000365662 106 ntBASIC2.84□□□□□ -1.95
CDK3Q00526 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
CDK3Q00526 SNORA18.3-201ENST00000384122 132 ntBASIC2.84□□□□□ -1.95
CDK3Q00526 RNU6-550P-201ENST00000391057 101 ntBASIC2.84□□□□□ -1.95
CDK3Q00526 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC2.84□□□□□ -1.95
CDK3Q00526 MTCYBP5-201ENST00000423752 1135 ntBASIC2.84□□□□□ -1.95
CDK3Q00526 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.84□□□□□ -1.95
CDK3Q00526 AL596276.1-201ENST00000434465 418 ntBASIC2.84□□□□□ -1.95
CDK3Q00526 AC009969.1-201ENST00000438726 172 ntBASIC2.84□□□□□ -1.95
CDK3Q00526 RPL23AP20-201ENST00000447965 421 ntBASIC2.84□□□□□ -1.95
CDK3Q00526 AC104058.1-201ENST00000448028 297 ntBASIC2.84□□□□□ -1.95
CDK3Q00526 PSPHP1-201ENST00000450062 261 ntBASIC2.84□□□□□ -1.95
CDK3Q00526 AC027673.1-201ENST00000456245 405 ntBASIC2.84□□□□□ -1.95
CDK3Q00526 RNU7-63P-201ENST00000459054 62 ntBASIC2.84□□□□□ -1.95
CDK3Q00526 RPL21P8-201ENST00000465083 535 ntBASIC2.84□□□□□ -1.95
CDK3Q00526 RN7SL283P-201ENST00000489055 303 ntBASIC2.84□□□□□ -1.95
CDK3Q00526 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.84□□□□□ -1.95
CDK3Q00526 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.84□□□□□ -1.95
CDK3Q00526 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.84□□□□□ -1.95
CDK3Q00526 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.84□□□□□ -1.95
CDK3Q00526 RAC1P5-201ENST00000512182 576 ntBASIC2.84□□□□□ -1.95
CDK3Q00526 AC091826.1-201ENST00000514065 313 ntBASIC2.84□□□□□ -1.95
CDK3Q00526 RNU6-703P-201ENST00000516946 107 ntBASIC2.84□□□□□ -1.95
CDK3Q00526 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.84□□□□□ -1.95
CDK3Q00526 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.84□□□□□ -1.95
CDK3Q00526 MIR4703-201ENST00000577728 79 ntBASIC2.84□□□□□ -1.95
CDK3Q00526 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.84□□□□□ -1.95
CDK3Q00526 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CDK3Q00526 MIR4506-201ENST00000584693 77 ntBASIC2.84□□□□□ -1.95
CDK3Q00526 AC007938.3-201ENST00000604965 623 ntBASIC2.84□□□□□ -1.95
CDK3Q00526 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.84□□□□□ -1.95
CDK3Q00526 AC110079.1-202ENST00000635213 138 ntBASIC2.84□□□□□ -1.95
CDK3Q00526 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.84□□□□□ -1.95
CDK3Q00526 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.84□□□□□ -1.95
CDK3Q00526 AL365361.1-201ENST00000566942 3481 ntBASIC2.84□□□□□ -1.95
CDK3Q00526 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
CDK3Q00526 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms