Protein–RNA interactions for Protein: Q00444

HOXC5, Homeobox protein Hox-C5, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5Q00444 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
HOXC5Q00444 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.42□□□□□ -2.18
HOXC5Q00444 MIR320A-201ENST00000385302 82 ntBASIC1.42□□□□□ -2.18
HOXC5Q00444 AL590084.1-201ENST00000407885 387 ntBASIC1.42□□□□□ -2.18
HOXC5Q00444 MIR1323-201ENST00000408090 73 ntBASIC1.42□□□□□ -2.18
HOXC5Q00444 RNA5SP450-201ENST00000411206 102 ntBASIC1.42□□□□□ -2.18
HOXC5Q00444 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.42□□□□□ -2.18
HOXC5Q00444 RPS24P7-201ENST00000416921 246 ntBASIC1.42□□□□□ -2.18
HOXC5Q00444 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC1.42□□□□□ -2.18
HOXC5Q00444 AC097463.2-201ENST00000421074 142 ntBASIC1.42□□□□□ -2.18
HOXC5Q00444 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC1.42□□□□□ -2.18
HOXC5Q00444 GTF2IP3-201ENST00000433887 494 ntBASIC1.42□□□□□ -2.18
HOXC5Q00444 AC017099.1-201ENST00000448261 1028 ntBASIC1.42□□□□□ -2.18
HOXC5Q00444 FABP5P15-201ENST00000453566 214 ntBASIC1.42□□□□□ -2.18
HOXC5Q00444 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.42□□□□□ -2.18
HOXC5Q00444 RPL37P6-201ENST00000460682 294 ntBASIC1.42□□□□□ -2.18
HOXC5Q00444 AC112771.1-201ENST00000463581 102 ntBASIC1.42□□□□□ -2.18
HOXC5Q00444 RPL22P13-201ENST00000493291 347 ntBASIC1.42□□□□□ -2.18
HOXC5Q00444 HMGB1P35-201ENST00000503360 598 ntBASIC1.42□□□□□ -2.18
HOXC5Q00444 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.42□□□□□ -2.18
HOXC5Q00444 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.42□□□□□ -2.18
HOXC5Q00444 AC021451.1-201ENST00000523498 1129 ntBASIC1.42□□□□□ -2.18
HOXC5Q00444 DEFB131D-201ENST00000526803 184 ntBASIC1.42□□□□□ -2.18
HOXC5Q00444 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.42□□□□□ -2.18
HOXC5Q00444 AP005435.4-201ENST00000529514 284 ntBASIC1.42□□□□□ -2.18
HOXC5Q00444 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.42□□□□□ -2.18
HOXC5Q00444 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.42□□□□□ -2.18
HOXC5Q00444 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.42□□□□□ -2.18
HOXC5Q00444 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.42□□□□□ -2.18
HOXC5Q00444 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC1.42□□□□□ -2.18
HOXC5Q00444 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.42□□□□□ -2.18
HOXC5Q00444 AC060771.1-201ENST00000582031 164 ntBASIC1.42□□□□□ -2.18
HOXC5Q00444 AC243960.4-201ENST00000600532 288 ntBASIC1.42□□□□□ -2.18
HOXC5Q00444 AC091057.3-201ENST00000602684 733 ntBASIC1.42□□□□□ -2.18
HOXC5Q00444 AF129408.1-201ENST00000608767 431 ntBASIC1.42□□□□□ -2.18
HOXC5Q00444 AC009974.1-201ENST00000608881 455 ntBASIC1.42□□□□□ -2.18
HOXC5Q00444 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.42□□□□□ -2.18
HOXC5Q00444 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.41□□□□□ -2.18
HOXC5Q00444 RNU6-777P-201ENST00000364265 104 ntBASIC1.41□□□□□ -2.18
HOXC5Q00444 MIR1304-201ENST00000408243 91 ntBASIC1.41□□□□□ -2.18
HOXC5Q00444 AC078974.1-201ENST00000411597 223 ntBASIC1.41□□□□□ -2.18
HOXC5Q00444 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.41□□□□□ -2.18
HOXC5Q00444 USP9YP26-201ENST00000421008 661 ntBASIC1.41□□□□□ -2.18
HOXC5Q00444 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.41□□□□□ -2.18
HOXC5Q00444 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.41□□□□□ -2.18
HOXC5Q00444 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC1.41□□□□□ -2.18
HOXC5Q00444 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC1.41□□□□□ -2.18
HOXC5Q00444 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC1.41□□□□□ -2.18
HOXC5Q00444 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.41□□□□□ -2.18
HOXC5Q00444 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.41□□□□□ -2.18
HOXC5Q00444 MEMO1P3-201ENST00000459811 302 ntBASIC1.41□□□□□ -2.18
HOXC5Q00444 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC1.41□□□□□ -2.18
HOXC5Q00444 RN7SL429P-201ENST00000479090 223 ntBASIC1.41□□□□□ -2.18
HOXC5Q00444 AC023790.1-201ENST00000482174 347 ntBASIC1.41□□□□□ -2.18
HOXC5Q00444 RN7SL489P-201ENST00000486185 223 ntBASIC1.41□□□□□ -2.18
HOXC5Q00444 RN7SL327P-201ENST00000488659 223 ntBASIC1.41□□□□□ -2.18
HOXC5Q00444 RNU6-703P-201ENST00000516946 107 ntBASIC1.41□□□□□ -2.18
HOXC5Q00444 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.41□□□□□ -2.18
HOXC5Q00444 OR5AL2P-201ENST00000532185 920 ntBASIC1.41□□□□□ -2.18
HOXC5Q00444 AC005832.3-201ENST00000537929 631 ntBASIC1.41□□□□□ -2.18
HOXC5Q00444 AC087894.1-201ENST00000538359 518 ntBASIC1.41□□□□□ -2.18
HOXC5Q00444 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
HOXC5Q00444 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.41□□□□□ -2.18
HOXC5Q00444 AC012213.3-201ENST00000577199 777 ntBASIC1.41□□□□□ -2.18
HOXC5Q00444 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.41□□□□□ -2.18
HOXC5Q00444 BNIP3P23-201ENST00000599655 511 ntBASIC1.41□□□□□ -2.18
HOXC5Q00444 RN7SL853P-201ENST00000617250 223 ntBASIC1.41□□□□□ -2.18
HOXC5Q00444 MIR5739-201ENST00000619803 80 ntBASIC1.41□□□□□ -2.18
HOXC5Q00444 AC112204.3-201ENST00000623822 332 ntBASIC1.41□□□□□ -2.18
HOXC5Q00444 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.41□□□□□ -2.18
HOXC5Q00444 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.41□□□□□ -2.18
HOXC5Q00444 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
HOXC5Q00444 AC092447.10-201ENST00000620607 1652 ntBASIC1.4□□□□□ -2.19
HOXC5Q00444 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
HOXC5Q00444 NACAP2-201ENST00000318548 624 ntBASIC1.4□□□□□ -2.19
HOXC5Q00444 RNU6-853P-201ENST00000364306 107 ntBASIC1.4□□□□□ -2.19
HOXC5Q00444 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
HOXC5Q00444 RNU6-224P-201ENST00000384055 107 ntBASIC1.4□□□□□ -2.19
HOXC5Q00444 SNORA26.9-201ENST00000391322 122 ntBASIC1.4□□□□□ -2.19
HOXC5Q00444 AL591034.2-201ENST00000402839 359 ntBASIC1.4□□□□□ -2.19
HOXC5Q00444 AL021407.1-201ENST00000404531 386 ntBASIC1.4□□□□□ -2.19
HOXC5Q00444 MIR1261-201ENST00000408659 82 ntBASIC1.4□□□□□ -2.19
HOXC5Q00444 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.4□□□□□ -2.19
HOXC5Q00444 TIMM9P2-201ENST00000419324 266 ntBASIC1.4□□□□□ -2.19
HOXC5Q00444 RPL23AP76-201ENST00000441860 458 ntBASIC1.4□□□□□ -2.19
HOXC5Q00444 MTND6P13-201ENST00000443510 523 ntBASIC1.4□□□□□ -2.19
HOXC5Q00444 AC010095.1-201ENST00000443543 144 ntBASIC1.4□□□□□ -2.19
HOXC5Q00444 AC007677.1-201ENST00000445757 515 ntBASIC1.4□□□□□ -2.19
HOXC5Q00444 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC1.4□□□□□ -2.19
HOXC5Q00444 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC1.4□□□□□ -2.19
HOXC5Q00444 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.4□□□□□ -2.19
HOXC5Q00444 AC096745.1-201ENST00000509945 370 ntBASIC1.4□□□□□ -2.19
HOXC5Q00444 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.4□□□□□ -2.19
HOXC5Q00444 RNA5SP137-201ENST00000516833 135 ntBASIC1.4□□□□□ -2.19
HOXC5Q00444 RNU6-1028P-201ENST00000517164 93 ntBASIC1.4□□□□□ -2.19
HOXC5Q00444 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.4□□□□□ -2.19
HOXC5Q00444 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
HOXC5Q00444 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
HOXC5Q00444 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.4□□□□□ -2.19
HOXC5Q00444 AC005034.5-201ENST00000604219 466 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 148.1 ms