Protein–RNA interactions for Protein: Q00341

HDLBP, Vigilin, humanhuman

Known RBP Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBPQ00341 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC4.62□□□□□ -1.67
HDLBPQ00341 SYF2P1-201ENST00000550658 413 ntBASIC4.62□□□□□ -1.67
HDLBPQ00341 CYP2C61P-201ENST00000604072 290 ntBASIC4.62□□□□□ -1.67
HDLBPQ00341 MIR6128-201ENST00000615528 109 ntBASIC4.62□□□□□ -1.67
HDLBPQ00341 AC007742.2-201ENST00000618226 398 ntBASIC4.62□□□□□ -1.67
HDLBPQ00341 AC090971.5-201ENST00000621102 293 ntBASIC4.62□□□□□ -1.67
HDLBPQ00341 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.62□□□□□ -1.67
HDLBPQ00341 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HDLBPQ00341 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HDLBPQ00341 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.62□□□□□ -1.67
HDLBPQ00341 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HDLBPQ00341 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HDLBPQ00341 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.62□□□□□ -1.67
HDLBPQ00341 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
HDLBPQ00341 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC4.61□□□□□ -1.67
HDLBPQ00341 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HDLBPQ00341 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
HDLBPQ00341 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.61□□□□□ -1.67
HDLBPQ00341 RNA5SP387-201ENST00000364226 106 ntBASIC4.61□□□□□ -1.67
HDLBPQ00341 RNU6-384P-201ENST00000364900 104 ntBASIC4.61□□□□□ -1.67
HDLBPQ00341 RNU6-95P-201ENST00000384697 107 ntBASIC4.61□□□□□ -1.67
HDLBPQ00341 AC005534.2-201ENST00000431047 433 ntBASIC4.61□□□□□ -1.67
HDLBPQ00341 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.61□□□□□ -1.67
HDLBPQ00341 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.61□□□□□ -1.67
HDLBPQ00341 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC4.61□□□□□ -1.67
HDLBPQ00341 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.61□□□□□ -1.67
HDLBPQ00341 Y_RNA.653-201ENST00000459091 95 ntBASIC4.61□□□□□ -1.67
HDLBPQ00341 AC128713.1-201ENST00000471495 306 ntBASIC4.61□□□□□ -1.67
HDLBPQ00341 RPL32P34-201ENST00000486380 400 ntBASIC4.61□□□□□ -1.67
HDLBPQ00341 AC092436.3-201ENST00000511788 257 ntBASIC4.61□□□□□ -1.67
HDLBPQ00341 RNU4ATAC7P-201ENST00000516280 125 ntBASIC4.61□□□□□ -1.67
HDLBPQ00341 RNU6-703P-201ENST00000516946 107 ntBASIC4.61□□□□□ -1.67
HDLBPQ00341 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HDLBPQ00341 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC4.61□□□□□ -1.67
HDLBPQ00341 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.61□□□□□ -1.67
HDLBPQ00341 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.61□□□□□ -1.67
HDLBPQ00341 AC064836.2-201ENST00000609491 462 ntBASIC4.61□□□□□ -1.67
HDLBPQ00341 AC084781.2-201ENST00000615568 161 ntBASIC4.61□□□□□ -1.67
HDLBPQ00341 AC084757.4-201ENST00000616350 526 ntBASIC4.61□□□□□ -1.67
HDLBPQ00341 PISRT1.1-201ENST00000616930 107 ntBASIC4.61□□□□□ -1.67
HDLBPQ00341 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.61□□□□□ -1.67
HDLBPQ00341 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC4.61□□□□□ -1.67
HDLBPQ00341 AL359757.2-201ENST00000624309 274 ntBASIC4.61□□□□□ -1.67
HDLBPQ00341 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.61□□□□□ -1.67
HDLBPQ00341 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HDLBPQ00341 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HDLBPQ00341 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
HDLBPQ00341 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.61□□□□□ -1.67
HDLBPQ00341 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
HDLBPQ00341 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HDLBPQ00341 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HDLBPQ00341 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
HDLBPQ00341 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
HDLBPQ00341 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HDLBPQ00341 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HDLBPQ00341 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.6□□□□□ -1.67
HDLBPQ00341 AC010733.2-201ENST00000589496 5702 ntBASIC4.6□□□□□ -1.67
HDLBPQ00341 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HDLBPQ00341 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HDLBPQ00341 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HDLBPQ00341 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.6□□□□□ -1.67
HDLBPQ00341 RNU6-1227P-201ENST00000383981 107 ntBASIC4.6□□□□□ -1.67
HDLBPQ00341 Y_RNA.419-201ENST00000384041 102 ntBASIC4.6□□□□□ -1.67
HDLBPQ00341 AL445529.1-201ENST00000398713 389 ntBASIC4.6□□□□□ -1.67
HDLBPQ00341 AC016831.2-201ENST00000417179 352 ntBASIC4.6□□□□□ -1.67
HDLBPQ00341 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC4.6□□□□□ -1.67
HDLBPQ00341 RPL12P25-201ENST00000455592 494 ntBASIC4.6□□□□□ -1.67
HDLBPQ00341 AC006026.2-201ENST00000457376 180 ntBASIC4.6□□□□□ -1.67
HDLBPQ00341 HMGB3P15-201ENST00000507326 574 ntBASIC4.6□□□□□ -1.67
HDLBPQ00341 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HDLBPQ00341 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC4.6□□□□□ -1.67
HDLBPQ00341 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC4.6□□□□□ -1.67
HDLBPQ00341 AMZ2P1-203ENST00000565833 850 ntBASIC4.6□□□□□ -1.67
HDLBPQ00341 MIR3609-201ENST00000582661 80 ntBASIC4.6□□□□□ -1.67
HDLBPQ00341 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC4.6□□□□□ -1.67
HDLBPQ00341 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HDLBPQ00341 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.6□□□□□ -1.67
HDLBPQ00341 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.6□□□□□ -1.67
HDLBPQ00341 Z69720.2-201ENST00000624755 279 ntBASIC4.6□□□□□ -1.67
HDLBPQ00341 SCARNA4-202ENST00000625402 129 ntBASIC4.6□□□□□ -1.67
HDLBPQ00341 MTND4LP32-201ENST00000636111 270 ntBASIC4.6□□□□□ -1.67
HDLBPQ00341 AL773545.4-201ENST00000637262 310 ntBASIC4.6□□□□□ -1.67
HDLBPQ00341 AL513478.4-201ENST00000641636 310 ntBASIC4.6□□□□□ -1.67
HDLBPQ00341 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HDLBPQ00341 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HDLBPQ00341 MTND4P23-201ENST00000447723 1363 ntBASIC4.6□□□□□ -1.67
HDLBPQ00341 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HDLBPQ00341 AC007656.2-201ENST00000624902 4547 ntBASIC4.6□□□□□ -1.67
HDLBPQ00341 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
HDLBPQ00341 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HDLBPQ00341 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
HDLBPQ00341 SRP72P2-201ENST00000344851 1979 ntBASIC4.59□□□□□ -1.67
HDLBPQ00341 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC4.59□□□□□ -1.67
HDLBPQ00341 RPL5P18-201ENST00000406671 891 ntBASIC4.59□□□□□ -1.67
HDLBPQ00341 RNU4-14P-201ENST00000410858 122 ntBASIC4.59□□□□□ -1.67
HDLBPQ00341 NDUFS5P4-201ENST00000412983 318 ntBASIC4.59□□□□□ -1.67
HDLBPQ00341 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.59□□□□□ -1.67
HDLBPQ00341 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.59□□□□□ -1.67
HDLBPQ00341 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC4.59□□□□□ -1.67
HDLBPQ00341 AL590664.1-201ENST00000448065 339 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms