Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 RPS4XP13-201ENST00000483219 789 ntBASIC3.05□□□□□ -1.92
SEC61A1P61619 AC106707.2-201ENST00000484182 374 ntBASIC3.05□□□□□ -1.92
SEC61A1P61619 AC009901.1-201ENST00000506703 541 ntBASIC3.05□□□□□ -1.92
SEC61A1P61619 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.05□□□□□ -1.92
SEC61A1P61619 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.05□□□□□ -1.92
SEC61A1P61619 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.05□□□□□ -1.92
SEC61A1P61619 RNU6-559P-201ENST00000516151 98 ntBASIC3.05□□□□□ -1.92
SEC61A1P61619 SNORA64.4-201ENST00000516632 81 ntBASIC3.05□□□□□ -1.92
SEC61A1P61619 SNORA70.18-201ENST00000516696 98 ntBASIC3.05□□□□□ -1.92
SEC61A1P61619 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.05□□□□□ -1.92
SEC61A1P61619 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.05□□□□□ -1.92
SEC61A1P61619 MIR3672-201ENST00000584290 82 ntBASIC3.05□□□□□ -1.92
SEC61A1P61619 AC008739.3-201ENST00000603262 127 ntBASIC3.05□□□□□ -1.92
SEC61A1P61619 APOOP1-201ENST00000604695 592 ntBASIC3.05□□□□□ -1.92
SEC61A1P61619 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.05□□□□□ -1.92
SEC61A1P61619 AP002826.1-201ENST00000608835 315 ntBASIC3.05□□□□□ -1.92
SEC61A1P61619 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.05□□□□□ -1.92
SEC61A1P61619 AC099778.2-201ENST00000610904 211 ntBASIC3.05□□□□□ -1.92
SEC61A1P61619 AL359547.2-201ENST00000615810 418 ntBASIC3.05□□□□□ -1.92
SEC61A1P61619 MTND5P42-201ENST00000637720 498 ntBASIC3.05□□□□□ -1.92
SEC61A1P61619 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
SEC61A1P61619 AC068647.1-201ENST00000489539 2265 ntBASIC3.05□□□□□ -1.92
SEC61A1P61619 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
SEC61A1P61619 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SEC61A1P61619 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SEC61A1P61619 AL137003.2-201ENST00000606924 2538 ntBASIC3.04□□□□□ -1.92
SEC61A1P61619 AC007656.2-201ENST00000624902 4547 ntBASIC3.04□□□□□ -1.92
SEC61A1P61619 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.04□□□□□ -1.92
SEC61A1P61619 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.04□□□□□ -1.92
SEC61A1P61619 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SEC61A1P61619 MIR148B-201ENST00000362252 99 ntBASIC3.04□□□□□ -1.92
SEC61A1P61619 SNORD9-201ENST00000362566 104 ntBASIC3.04□□□□□ -1.92
SEC61A1P61619 SNORD113-7-201ENST00000363762 77 ntBASIC3.04□□□□□ -1.92
SEC61A1P61619 Y_RNA.259-201ENST00000364619 101 ntBASIC3.04□□□□□ -1.92
SEC61A1P61619 Y_RNA.387-201ENST00000383918 102 ntBASIC3.04□□□□□ -1.92
SEC61A1P61619 RNU6-393P-201ENST00000384475 107 ntBASIC3.04□□□□□ -1.92
SEC61A1P61619 U3.39-201ENST00000408569 239 ntBASIC3.04□□□□□ -1.92
SEC61A1P61619 RPS12P24-201ENST00000412619 387 ntBASIC3.04□□□□□ -1.92
SEC61A1P61619 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.04□□□□□ -1.92
SEC61A1P61619 BX842559.1-201ENST00000419615 532 ntBASIC3.04□□□□□ -1.92
SEC61A1P61619 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.04□□□□□ -1.92
SEC61A1P61619 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.04□□□□□ -1.92
SEC61A1P61619 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.04□□□□□ -1.92
SEC61A1P61619 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.04□□□□□ -1.92
SEC61A1P61619 CEACAMP4-201ENST00000457676 421 ntBASIC3.04□□□□□ -1.92
SEC61A1P61619 RPL23AP62-201ENST00000463396 453 ntBASIC3.04□□□□□ -1.92
SEC61A1P61619 AC091153.1-201ENST00000466297 402 ntBASIC3.04□□□□□ -1.92
SEC61A1P61619 AC021205.2-201ENST00000480069 347 ntBASIC3.04□□□□□ -1.92
SEC61A1P61619 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.04□□□□□ -1.92
SEC61A1P61619 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SEC61A1P61619 AL359273.1-201ENST00000510918 627 ntBASIC3.04□□□□□ -1.92
SEC61A1P61619 RN7SKP13-201ENST00000515933 244 ntBASIC3.04□□□□□ -1.92
SEC61A1P61619 RNU6-256P-201ENST00000516747 97 ntBASIC3.04□□□□□ -1.92
SEC61A1P61619 RNA5SP468-201ENST00000516782 93 ntBASIC3.04□□□□□ -1.92
SEC61A1P61619 RANP9-201ENST00000519957 271 ntBASIC3.04□□□□□ -1.92
SEC61A1P61619 AC104027.1-201ENST00000521887 300 ntBASIC3.04□□□□□ -1.92
SEC61A1P61619 AP006245.1-201ENST00000522549 120 ntBASIC3.04□□□□□ -1.92
SEC61A1P61619 AP000889.2-201ENST00000532684 490 ntBASIC3.04□□□□□ -1.92
SEC61A1P61619 AC006077.1-201ENST00000604746 343 ntBASIC3.04□□□□□ -1.92
SEC61A1P61619 AL627309.6-201ENST00000606857 840 ntBASIC3.04□□□□□ -1.92
SEC61A1P61619 MIR15A-201ENST00000607334 83 ntBASIC3.04□□□□□ -1.92
SEC61A1P61619 AC064836.2-201ENST00000609491 462 ntBASIC3.04□□□□□ -1.92
SEC61A1P61619 AC069200.1-201ENST00000609511 323 ntBASIC3.04□□□□□ -1.92
SEC61A1P61619 AC006023.2-201ENST00000609916 167 ntBASIC3.04□□□□□ -1.92
SEC61A1P61619 AC012314.7-201ENST00000619693 93 ntBASIC3.04□□□□□ -1.92
SEC61A1P61619 AC022149.2-201ENST00000621061 203 ntBASIC3.04□□□□□ -1.92
SEC61A1P61619 AC048347.1-201ENST00000624621 427 ntBASIC3.04□□□□□ -1.92
SEC61A1P61619 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.04□□□□□ -1.92
SEC61A1P61619 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
SEC61A1P61619 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SEC61A1P61619 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SEC61A1P61619 AC007496.3-201ENST00000624987 3443 ntBASIC3.04□□□□□ -1.92
SEC61A1P61619 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SEC61A1P61619 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SEC61A1P61619 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.03□□□□□ -1.92
SEC61A1P61619 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.92
SEC61A1P61619 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.03□□□□□ -1.92
SEC61A1P61619 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
SEC61A1P61619 AC121333.1-201ENST00000567488 2709 ntBASIC3.03□□□□□ -1.92
SEC61A1P61619 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.03□□□□□ -1.92
SEC61A1P61619 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
SEC61A1P61619 RNA5SP119-201ENST00000362715 117 ntBASIC3.03□□□□□ -1.92
SEC61A1P61619 RNU6-254P-201ENST00000363377 107 ntBASIC3.03□□□□□ -1.92
SEC61A1P61619 RNU6-82P-201ENST00000363970 107 ntBASIC3.03□□□□□ -1.92
SEC61A1P61619 RNU6-1013P-201ENST00000384180 107 ntBASIC3.03□□□□□ -1.92
SEC61A1P61619 Y_RNA.579-201ENST00000390939 94 ntBASIC3.03□□□□□ -1.92
SEC61A1P61619 snosnR66.1-201ENST00000391095 99 ntBASIC3.03□□□□□ -1.92
SEC61A1P61619 PTMAP5-201ENST00000393073 333 ntBASIC3.03□□□□□ -1.92
SEC61A1P61619 EIF4E2P1-201ENST00000393781 255 ntBASIC3.03□□□□□ -1.92
SEC61A1P61619 NCOR1P3-201ENST00000420479 303 ntBASIC3.03□□□□□ -1.92
SEC61A1P61619 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.03□□□□□ -1.92
SEC61A1P61619 AL160275.3-201ENST00000423876 471 ntBASIC3.03□□□□□ -1.92
SEC61A1P61619 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.03□□□□□ -1.92
SEC61A1P61619 AL669831.1-202ENST00000428504 417 ntBASIC3.03□□□□□ -1.92
SEC61A1P61619 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.03□□□□□ -1.92
SEC61A1P61619 HMGB1P27-201ENST00000431429 603 ntBASIC3.03□□□□□ -1.92
SEC61A1P61619 RPS3AP52-201ENST00000435639 297 ntBASIC3.03□□□□□ -1.92
SEC61A1P61619 NDUFA5P4-201ENST00000436704 385 ntBASIC3.03□□□□□ -1.92
SEC61A1P61619 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.03□□□□□ -1.92
SEC61A1P61619 GTF2IP13-201ENST00000438487 386 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 157.9 ms