Protein–RNA interactions for Protein: P59025

RTP1, Receptor-transporting protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP1P59025 RNU6-874P-201ENST00000362390 105 ntBASIC4.42□□□□□ -1.7
RTP1P59025 Y_RNA.210-201ENST00000364161 110 ntBASIC4.42□□□□□ -1.7
RTP1P59025 RNA5SP97-201ENST00000365006 84 ntBASIC4.42□□□□□ -1.7
RTP1P59025 Y_RNA.447-201ENST00000384184 113 ntBASIC4.42□□□□□ -1.7
RTP1P59025 Y_RNA.489-201ENST00000384410 101 ntBASIC4.42□□□□□ -1.7
RTP1P59025 MIR517A-201ENST00000385001 87 ntBASIC4.42□□□□□ -1.7
RTP1P59025 MIR1251-201ENST00000408552 70 ntBASIC4.42□□□□□ -1.7
RTP1P59025 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC4.42□□□□□ -1.7
RTP1P59025 AL035423.1-201ENST00000420331 213 ntBASIC4.42□□□□□ -1.7
RTP1P59025 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC4.42□□□□□ -1.7
RTP1P59025 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.42□□□□□ -1.7
RTP1P59025 AL591212.2-201ENST00000433923 257 ntBASIC4.42□□□□□ -1.7
RTP1P59025 AC083863.1-201ENST00000438811 231 ntBASIC4.42□□□□□ -1.7
RTP1P59025 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.42□□□□□ -1.7
RTP1P59025 DYNLT3P2-201ENST00000442517 295 ntBASIC4.42□□□□□ -1.7
RTP1P59025 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.42□□□□□ -1.7
RTP1P59025 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.42□□□□□ -1.7
RTP1P59025 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC4.42□□□□□ -1.7
RTP1P59025 RNU7-138P-201ENST00000459479 64 ntBASIC4.42□□□□□ -1.7
RTP1P59025 RPL9P32-201ENST00000464118 620 ntBASIC4.42□□□□□ -1.7
RTP1P59025 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.42□□□□□ -1.7
RTP1P59025 AC114801.2-201ENST00000503825 781 ntBASIC4.42□□□□□ -1.7
RTP1P59025 HMGN1P11-201ENST00000508668 303 ntBASIC4.42□□□□□ -1.7
RTP1P59025 RN7SKP234-201ENST00000517173 224 ntBASIC4.42□□□□□ -1.7
RTP1P59025 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC4.42□□□□□ -1.7
RTP1P59025 HSBP1P1-201ENST00000555205 166 ntBASIC4.42□□□□□ -1.7
RTP1P59025 OR4H12P-201ENST00000556269 907 ntBASIC4.42□□□□□ -1.7
RTP1P59025 AC005000.2-201ENST00000605468 310 ntBASIC4.42□□□□□ -1.7
RTP1P59025 MIR8062-201ENST00000621515 85 ntBASIC4.42□□□□□ -1.7
RTP1P59025 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RTP1P59025 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RTP1P59025 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RTP1P59025 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RTP1P59025 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.41□□□□□ -1.7
RTP1P59025 Y_RNA.152-201ENST00000363578 100 ntBASIC4.41□□□□□ -1.7
RTP1P59025 RNU6-1329P-201ENST00000365664 107 ntBASIC4.41□□□□□ -1.7
RTP1P59025 Y_RNA.480-201ENST00000384364 102 ntBASIC4.41□□□□□ -1.7
RTP1P59025 AL603908.1-201ENST00000406098 201 ntBASIC4.41□□□□□ -1.7
RTP1P59025 MIR1250-201ENST00000408098 113 ntBASIC4.41□□□□□ -1.7
RTP1P59025 AC073063.1-201ENST00000434352 607 ntBASIC4.41□□□□□ -1.7
RTP1P59025 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.41□□□□□ -1.7
RTP1P59025 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC4.41□□□□□ -1.7
RTP1P59025 OSTCP8-201ENST00000445117 448 ntBASIC4.41□□□□□ -1.7
RTP1P59025 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.41□□□□□ -1.7
RTP1P59025 RPL21P41-201ENST00000459863 264 ntBASIC4.41□□□□□ -1.7
RTP1P59025 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.41□□□□□ -1.7
RTP1P59025 RPS23P3-201ENST00000470993 430 ntBASIC4.41□□□□□ -1.7
RTP1P59025 AP000926.1-201ENST00000479573 241 ntBASIC4.41□□□□□ -1.7
RTP1P59025 AC105758.1-201ENST00000506038 399 ntBASIC4.41□□□□□ -1.7
RTP1P59025 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.41□□□□□ -1.7
RTP1P59025 RNU6-408P-201ENST00000515910 100 ntBASIC4.41□□□□□ -1.7
RTP1P59025 SNORA31.3-201ENST00000516029 96 ntBASIC4.41□□□□□ -1.7
RTP1P59025 RNU6-1143P-201ENST00000516125 104 ntBASIC4.41□□□□□ -1.7
RTP1P59025 RN7SKP258-201ENST00000517151 304 ntBASIC4.41□□□□□ -1.7
RTP1P59025 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.41□□□□□ -1.7
RTP1P59025 HMGB3P26-201ENST00000560051 582 ntBASIC4.41□□□□□ -1.7
RTP1P59025 AC109446.1-201ENST00000566172 220 ntBASIC4.41□□□□□ -1.7
RTP1P59025 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.41□□□□□ -1.7
RTP1P59025 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.41□□□□□ -1.7
RTP1P59025 MIR15A-201ENST00000607334 83 ntBASIC4.41□□□□□ -1.7
RTP1P59025 AC078938.1-201ENST00000620993 318 ntBASIC4.41□□□□□ -1.7
RTP1P59025 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.41□□□□□ -1.7
RTP1P59025 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RTP1P59025 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
RTP1P59025 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
RTP1P59025 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
RTP1P59025 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC4.4□□□□□ -1.7
RTP1P59025 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
RTP1P59025 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
RTP1P59025 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.4□□□□□ -1.7
RTP1P59025 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
RTP1P59025 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.71
RTP1P59025 RNA5SP399-201ENST00000364003 117 ntBASIC4.4□□□□□ -1.71
RTP1P59025 Y_RNA.314-201ENST00000365114 102 ntBASIC4.4□□□□□ -1.71
RTP1P59025 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
RTP1P59025 MIR1252-201ENST00000408861 65 ntBASIC4.4□□□□□ -1.71
RTP1P59025 RPS15AP10-201ENST00000432472 382 ntBASIC4.4□□□□□ -1.71
RTP1P59025 AL159987.2-201ENST00000432754 307 ntBASIC4.4□□□□□ -1.71
RTP1P59025 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.4□□□□□ -1.71
RTP1P59025 RPL37P6-201ENST00000460682 294 ntBASIC4.4□□□□□ -1.71
RTP1P59025 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RTP1P59025 RPL31P60-201ENST00000478450 367 ntBASIC4.4□□□□□ -1.71
RTP1P59025 AC106707.2-201ENST00000484182 374 ntBASIC4.4□□□□□ -1.71
RTP1P59025 RPS26P15-201ENST00000488067 348 ntBASIC4.4□□□□□ -1.71
RTP1P59025 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RTP1P59025 AC007991.1-201ENST00000522680 631 ntBASIC4.4□□□□□ -1.71
RTP1P59025 AC104576.1-201ENST00000524225 88 ntBASIC4.4□□□□□ -1.71
RTP1P59025 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC4.4□□□□□ -1.71
RTP1P59025 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC4.4□□□□□ -1.71
RTP1P59025 Z98751.3-201ENST00000604447 521 ntBASIC4.4□□□□□ -1.71
RTP1P59025 SDR42E1P2-201ENST00000614861 481 ntBASIC4.4□□□□□ -1.71
RTP1P59025 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.4□□□□□ -1.71
RTP1P59025 MIR4727-201ENST00000622232 55 ntBASIC4.4□□□□□ -1.71
RTP1P59025 AL773545.4-201ENST00000637262 310 ntBASIC4.4□□□□□ -1.71
RTP1P59025 AL513478.4-201ENST00000641636 310 ntBASIC4.4□□□□□ -1.71
RTP1P59025 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RTP1P59025 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RTP1P59025 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RTP1P59025 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RTP1P59025 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 135.6 ms