Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
NR1H2P55055 AC119674.1-207ENST00000641355 633 ntBASIC3.25□□□□□ -1.89
NR1H2P55055 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
NR1H2P55055 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
NR1H2P55055 SNORA51.4-201ENST00000364993 124 ntBASIC3.24□□□□□ -1.89
NR1H2P55055 AC063979.1-201ENST00000415539 377 ntBASIC3.24□□□□□ -1.89
NR1H2P55055 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.24□□□□□ -1.89
NR1H2P55055 MRPS10P2-201ENST00000431226 381 ntBASIC3.24□□□□□ -1.89
NR1H2P55055 AL596276.1-201ENST00000434465 418 ntBASIC3.24□□□□□ -1.89
NR1H2P55055 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.24□□□□□ -1.89
NR1H2P55055 ELOCP23-201ENST00000452014 332 ntBASIC3.24□□□□□ -1.89
NR1H2P55055 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.24□□□□□ -1.89
NR1H2P55055 RNU6-261P-201ENST00000459506 102 ntBASIC3.24□□□□□ -1.89
NR1H2P55055 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.24□□□□□ -1.89
NR1H2P55055 AL163973.1-201ENST00000484753 577 ntBASIC3.24□□□□□ -1.89
NR1H2P55055 AC113155.1-201ENST00000511141 769 ntBASIC3.24□□□□□ -1.89
NR1H2P55055 RNA5SP401-201ENST00000515920 127 ntBASIC3.24□□□□□ -1.89
NR1H2P55055 RNA5SP385-201ENST00000515947 110 ntBASIC3.24□□□□□ -1.89
NR1H2P55055 RNU6-835P-201ENST00000516974 104 ntBASIC3.24□□□□□ -1.89
NR1H2P55055 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC3.24□□□□□ -1.89
NR1H2P55055 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.24□□□□□ -1.89
NR1H2P55055 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC3.24□□□□□ -1.89
NR1H2P55055 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.24□□□□□ -1.89
NR1H2P55055 AC092325.1-201ENST00000566449 554 ntBASIC3.24□□□□□ -1.89
NR1H2P55055 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.24□□□□□ -1.89
NR1H2P55055 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.24□□□□□ -1.89
NR1H2P55055 AL670379.4-201ENST00000605279 254 ntBASIC3.24□□□□□ -1.89
NR1H2P55055 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
NR1H2P55055 AL442067.2-201ENST00000614033 363 ntBASIC3.24□□□□□ -1.89
NR1H2P55055 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
NR1H2P55055 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
NR1H2P55055 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
NR1H2P55055 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.24□□□□□ -1.89
NR1H2P55055 MTND5P1-201ENST00000445440 1375 ntBASIC3.24□□□□□ -1.89
NR1H2P55055 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.24□□□□□ -1.89
NR1H2P55055 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
NR1H2P55055 Y_RNA.38-201ENST00000362617 102 ntBASIC3.23□□□□□ -1.89
NR1H2P55055 RNU6-1287P-201ENST00000362914 107 ntBASIC3.23□□□□□ -1.89
NR1H2P55055 Y_RNA.255-201ENST00000364581 97 ntBASIC3.23□□□□□ -1.89
NR1H2P55055 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.23□□□□□ -1.89
NR1H2P55055 RNU6-1060P-201ENST00000384664 107 ntBASIC3.23□□□□□ -1.89
NR1H2P55055 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
NR1H2P55055 CISD1P1-201ENST00000393907 327 ntBASIC3.23□□□□□ -1.89
NR1H2P55055 MIR1289-1-201ENST00000408836 144 ntBASIC3.23□□□□□ -1.89
NR1H2P55055 RN7SKP123-201ENST00000410732 291 ntBASIC3.23□□□□□ -1.89
NR1H2P55055 MTND1P23-201ENST00000416931 372 ntBASIC3.23□□□□□ -1.89
NR1H2P55055 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.23□□□□□ -1.89
NR1H2P55055 GTF2IP20-201ENST00000431663 360 ntBASIC3.23□□□□□ -1.89
NR1H2P55055 AC073415.1-201ENST00000449240 153 ntBASIC3.23□□□□□ -1.89
NR1H2P55055 AL118520.1-201ENST00000450770 291 ntBASIC3.23□□□□□ -1.89
NR1H2P55055 FGF7P6-202ENST00000451282 293 ntBASIC3.23□□□□□ -1.89
NR1H2P55055 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.23□□□□□ -1.89
NR1H2P55055 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.23□□□□□ -1.89
NR1H2P55055 RN7SL594P-201ENST00000470590 287 ntBASIC3.23□□□□□ -1.89
NR1H2P55055 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.23□□□□□ -1.89
NR1H2P55055 RPS29P20-201ENST00000489592 171 ntBASIC3.23□□□□□ -1.89
NR1H2P55055 AC139453.3-201ENST00000493276 369 ntBASIC3.23□□□□□ -1.89
NR1H2P55055 AC009901.1-201ENST00000506703 541 ntBASIC3.23□□□□□ -1.89
NR1H2P55055 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.23□□□□□ -1.89
NR1H2P55055 AC098591.2-201ENST00000510152 315 ntBASIC3.23□□□□□ -1.89
NR1H2P55055 RN7SKP219-201ENST00000516825 296 ntBASIC3.23□□□□□ -1.89
NR1H2P55055 SNORD19.2-201ENST00000516978 73 ntBASIC3.23□□□□□ -1.89
NR1H2P55055 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.23□□□□□ -1.89
NR1H2P55055 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.23□□□□□ -1.89
NR1H2P55055 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.23□□□□□ -1.89
NR1H2P55055 MIR4703-201ENST00000577728 79 ntBASIC3.23□□□□□ -1.89
NR1H2P55055 MIR5692A1-201ENST00000580523 69 ntBASIC3.23□□□□□ -1.89
NR1H2P55055 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.23□□□□□ -1.89
NR1H2P55055 MIR548AC-201ENST00000585049 88 ntBASIC3.23□□□□□ -1.89
NR1H2P55055 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.23□□□□□ -1.89
NR1H2P55055 AP000907.4-201ENST00000604143 237 ntBASIC3.23□□□□□ -1.89
NR1H2P55055 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
NR1H2P55055 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.23□□□□□ -1.89
NR1H2P55055 UCA1.1-201ENST00000620952 75 ntBASIC3.23□□□□□ -1.89
NR1H2P55055 AP000553.6-201ENST00000641242 118 ntBASIC3.23□□□□□ -1.89
NR1H2P55055 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.23□□□□□ -1.89
NR1H2P55055 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
NR1H2P55055 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
NR1H2P55055 MTND5P19-201ENST00000424872 1794 ntBASIC3.23□□□□□ -1.89
NR1H2P55055 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
NR1H2P55055 ADAM3A-203ENST00000461344 2157 ntBASIC3.22□□□□□ -1.89
NR1H2P55055 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
NR1H2P55055 AL049781.1-201ENST00000623195 3585 ntBASIC3.22□□□□□ -1.89
NR1H2P55055 AC093831.2-201ENST00000624393 3427 ntBASIC3.22□□□□□ -1.89
NR1H2P55055 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.22□□□□□ -1.89
NR1H2P55055 MIR412-201ENST00000362142 91 ntBASIC3.22□□□□□ -1.89
NR1H2P55055 RNA5SP51-201ENST00000364750 119 ntBASIC3.22□□□□□ -1.89
NR1H2P55055 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.22□□□□□ -1.89
NR1H2P55055 Y_RNA.573-201ENST00000384763 105 ntBASIC3.22□□□□□ -1.89
NR1H2P55055 RNU6-750P-201ENST00000390946 107 ntBASIC3.22□□□□□ -1.89
NR1H2P55055 MIR1277-201ENST00000408536 78 ntBASIC3.22□□□□□ -1.89
NR1H2P55055 Z92545.1-201ENST00000411782 234 ntBASIC3.22□□□□□ -1.89
NR1H2P55055 AL078601.1-201ENST00000444542 271 ntBASIC3.22□□□□□ -1.89
NR1H2P55055 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.22□□□□□ -1.89
NR1H2P55055 HMGN2P10-201ENST00000448085 265 ntBASIC3.22□□□□□ -1.89
NR1H2P55055 NIPA2P5-201ENST00000452282 464 ntBASIC3.22□□□□□ -1.89
NR1H2P55055 BX510359.1-201ENST00000456973 237 ntBASIC3.22□□□□□ -1.89
NR1H2P55055 MTCO3P38-201ENST00000468910 766 ntBASIC3.22□□□□□ -1.89
NR1H2P55055 MTAPP1-201ENST00000489154 819 ntBASIC3.22□□□□□ -1.89
NR1H2P55055 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms