Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 OR10AB1P-201ENST00000609613 938 ntBASIC2.35□□□□□ -2.03
MSH6P52701 AC079597.1-201ENST00000624306 508 ntBASIC2.35□□□□□ -2.03
MSH6P52701 PCMTD1P7-201ENST00000634506 357 ntBASIC2.35□□□□□ -2.03
MSH6P52701 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.35□□□□□ -2.03
MSH6P52701 MTND1P37-201ENST00000636562 264 ntBASIC2.35□□□□□ -2.03
MSH6P52701 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC2.35□□□□□ -2.03
MSH6P52701 AC131280.1-202ENST00000624067 4211 ntBASIC2.34□□□□□ -2.03
MSH6P52701 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.34□□□□□ -2.03
MSH6P52701 AC008669.1-201ENST00000565823 2178 ntBASIC2.34□□□□□ -2.03
MSH6P52701 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.34□□□□□ -2.03
MSH6P52701 MTND5P33-201ENST00000571250 1450 ntBASIC2.34□□□□□ -2.03
MSH6P52701 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
MSH6P52701 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
MSH6P52701 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
MSH6P52701 HSPE1P11-201ENST00000339579 310 ntBASIC2.34□□□□□ -2.04
MSH6P52701 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.34□□□□□ -2.04
MSH6P52701 RNY1-201ENST00000364228 113 ntBASIC2.34□□□□□ -2.04
MSH6P52701 RNU6-853P-201ENST00000364306 107 ntBASIC2.34□□□□□ -2.04
MSH6P52701 RNU6-217P-201ENST00000384164 104 ntBASIC2.34□□□□□ -2.04
MSH6P52701 SSR1P2-201ENST00000415208 787 ntBASIC2.34□□□□□ -2.04
MSH6P52701 MTCO2P21-201ENST00000419780 677 ntBASIC2.34□□□□□ -2.04
MSH6P52701 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.34□□□□□ -2.04
MSH6P52701 AL117351.1-201ENST00000438864 766 ntBASIC2.34□□□□□ -2.04
MSH6P52701 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC2.34□□□□□ -2.04
MSH6P52701 AP1S2P1-201ENST00000457344 379 ntBASIC2.34□□□□□ -2.04
MSH6P52701 HMGN1P7-201ENST00000491722 313 ntBASIC2.34□□□□□ -2.04
MSH6P52701 AC034222.1-201ENST00000494052 532 ntBASIC2.34□□□□□ -2.04
MSH6P52701 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.34□□□□□ -2.04
MSH6P52701 AC022447.3-201ENST00000506865 495 ntBASIC2.34□□□□□ -2.04
MSH6P52701 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.34□□□□□ -2.04
MSH6P52701 AC105185.1-201ENST00000518705 535 ntBASIC2.34□□□□□ -2.04
MSH6P52701 MTCO1P47-201ENST00000523889 1271 ntBASIC2.34□□□□□ -2.04
MSH6P52701 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.34□□□□□ -2.04
MSH6P52701 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC2.34□□□□□ -2.04
MSH6P52701 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.34□□□□□ -2.04
MSH6P52701 AL049838.1-201ENST00000563647 981 ntBASIC2.34□□□□□ -2.04
MSH6P52701 AC060771.1-201ENST00000582031 164 ntBASIC2.34□□□□□ -2.04
MSH6P52701 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.34□□□□□ -2.04
MSH6P52701 AC010133.1-201ENST00000615809 842 ntBASIC2.34□□□□□ -2.04
MSH6P52701 AC013470.4-201ENST00000619978 986 ntBASIC2.34□□□□□ -2.04
MSH6P52701 MIR6734-201ENST00000621166 68 ntBASIC2.34□□□□□ -2.04
MSH6P52701 DUXAP9-208ENST00000622815 614 ntBASIC2.34□□□□□ -2.04
MSH6P52701 PCF11-AS1-201ENST00000602322 1516 ntBASIC2.33□□□□□ -2.04
MSH6P52701 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
MSH6P52701 RNU1-42P-201ENST00000364033 160 ntBASIC2.33□□□□□ -2.04
MSH6P52701 SNORA16.1-201ENST00000364597 132 ntBASIC2.33□□□□□ -2.04
MSH6P52701 RNU6-60P-201ENST00000364792 103 ntBASIC2.33□□□□□ -2.04
MSH6P52701 RNU6-741P-201ENST00000383889 107 ntBASIC2.33□□□□□ -2.04
MSH6P52701 RNU6-432P-201ENST00000384196 109 ntBASIC2.33□□□□□ -2.04
MSH6P52701 AL451054.2-201ENST00000420896 202 ntBASIC2.33□□□□□ -2.04
MSH6P52701 AL445669.1-201ENST00000426743 755 ntBASIC2.33□□□□□ -2.04
MSH6P52701 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.33□□□□□ -2.04
MSH6P52701 RSU1P2-202ENST00000437884 485 ntBASIC2.33□□□□□ -2.04
MSH6P52701 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.33□□□□□ -2.04
MSH6P52701 Z82210.1-201ENST00000440037 231 ntBASIC2.33□□□□□ -2.04
MSH6P52701 AL049734.2-201ENST00000441066 616 ntBASIC2.33□□□□□ -2.04
MSH6P52701 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC2.33□□□□□ -2.04
MSH6P52701 RNU7-23P-201ENST00000459465 62 ntBASIC2.33□□□□□ -2.04
MSH6P52701 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC2.33□□□□□ -2.04
MSH6P52701 RPS15AP36-201ENST00000492022 382 ntBASIC2.33□□□□□ -2.04
MSH6P52701 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.33□□□□□ -2.04
MSH6P52701 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.33□□□□□ -2.04
MSH6P52701 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
MSH6P52701 RNU6-840P-201ENST00000517275 65 ntBASIC2.33□□□□□ -2.04
MSH6P52701 RNU1-104P-201ENST00000517280 175 ntBASIC2.33□□□□□ -2.04
MSH6P52701 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.33□□□□□ -2.04
MSH6P52701 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.33□□□□□ -2.04
MSH6P52701 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
MSH6P52701 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
MSH6P52701 DUXAP1-201ENST00000556632 463 ntBASIC2.33□□□□□ -2.04
MSH6P52701 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC2.33□□□□□ -2.04
MSH6P52701 AC087465.1-201ENST00000560574 245 ntBASIC2.33□□□□□ -2.04
MSH6P52701 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.33□□□□□ -2.04
MSH6P52701 AL391001.1-201ENST00000602747 715 ntBASIC2.33□□□□□ -2.04
MSH6P52701 SEPT7P9-203ENST00000604116 343 ntBASIC2.33□□□□□ -2.04
MSH6P52701 AC007349.4-201ENST00000608114 532 ntBASIC2.33□□□□□ -2.04
MSH6P52701 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.33□□□□□ -2.04
MSH6P52701 AP000676.3-201ENST00000623299 569 ntBASIC2.33□□□□□ -2.04
MSH6P52701 AC068880.5-201ENST00000624331 290 ntBASIC2.33□□□□□ -2.04
MSH6P52701 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.33□□□□□ -2.04
MSH6P52701 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
MSH6P52701 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
MSH6P52701 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
MSH6P52701 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.32□□□□□ -2.04
MSH6P52701 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.32□□□□□ -2.04
MSH6P52701 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.32□□□□□ -2.04
MSH6P52701 RNU6-723P-201ENST00000383973 107 ntBASIC2.32□□□□□ -2.04
MSH6P52701 TAS2R15P-201ENST00000390674 928 ntBASIC2.32□□□□□ -2.04
MSH6P52701 MIR1305-201ENST00000408300 86 ntBASIC2.32□□□□□ -2.04
MSH6P52701 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.32□□□□□ -2.04
MSH6P52701 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.32□□□□□ -2.04
MSH6P52701 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC2.32□□□□□ -2.04
MSH6P52701 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.32□□□□□ -2.04
MSH6P52701 MTND1P32-201ENST00000433043 938 ntBASIC2.32□□□□□ -2.04
MSH6P52701 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.32□□□□□ -2.04
MSH6P52701 CR769776.1-201ENST00000441254 787 ntBASIC2.32□□□□□ -2.04
MSH6P52701 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.32□□□□□ -2.04
MSH6P52701 RPS27P26-201ENST00000494583 239 ntBASIC2.32□□□□□ -2.04
MSH6P52701 MTCYBP43-201ENST00000513621 740 ntBASIC2.32□□□□□ -2.04
MSH6P52701 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms