Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 HMGB1P27-201ENST00000431429 603 ntBASIC2.14□□□□□ -2.07
RORAP35398 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.14□□□□□ -2.07
RORAP35398 AL354941.1-201ENST00000438600 464 ntBASIC2.14□□□□□ -2.07
RORAP35398 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.14□□□□□ -2.07
RORAP35398 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.14□□□□□ -2.07
RORAP35398 RPL9P6-201ENST00000492764 598 ntBASIC2.14□□□□□ -2.07
RORAP35398 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC2.14□□□□□ -2.07
RORAP35398 NAP1L1P1-201ENST00000524793 1063 ntBASIC2.14□□□□□ -2.07
RORAP35398 AP000873.5-201ENST00000533906 236 ntBASIC2.14□□□□□ -2.07
RORAP35398 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.14□□□□□ -2.07
RORAP35398 ARL2BPP2-201ENST00000550907 489 ntBASIC2.14□□□□□ -2.07
RORAP35398 MRPS36P5-201ENST00000551909 298 ntBASIC2.14□□□□□ -2.07
RORAP35398 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC2.14□□□□□ -2.07
RORAP35398 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.14□□□□□ -2.07
RORAP35398 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC2.14□□□□□ -2.07
RORAP35398 AC007151.1-201ENST00000572774 483 ntBASIC2.14□□□□□ -2.07
RORAP35398 AC024619.4-201ENST00000580924 316 ntBASIC2.14□□□□□ -2.07
RORAP35398 AC008751.2-201ENST00000597885 980 ntBASIC2.14□□□□□ -2.07
RORAP35398 AL355598.1-201ENST00000604169 202 ntBASIC2.14□□□□□ -2.07
RORAP35398 AC112187.2-201ENST00000604345 283 ntBASIC2.14□□□□□ -2.07
RORAP35398 AC092192.1-201ENST00000633154 1018 ntBASIC2.14□□□□□ -2.07
RORAP35398 MIR3199-2-201ENST00000636243 86 ntBASIC2.14□□□□□ -2.07
RORAP35398 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.14□□□□□ -2.07
RORAP35398 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
RORAP35398 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
RORAP35398 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.13□□□□□ -2.07
RORAP35398 RNY4P24-201ENST00000362735 96 ntBASIC2.13□□□□□ -2.07
RORAP35398 RNA5SP37-201ENST00000365420 130 ntBASIC2.13□□□□□ -2.07
RORAP35398 RNU6-701P-201ENST00000384059 107 ntBASIC2.13□□□□□ -2.07
RORAP35398 RNU6-253P-201ENST00000384730 105 ntBASIC2.13□□□□□ -2.07
RORAP35398 RNA5SP270-201ENST00000411361 118 ntBASIC2.13□□□□□ -2.07
RORAP35398 AC098592.1-201ENST00000419352 333 ntBASIC2.13□□□□□ -2.07
RORAP35398 AC124916.1-201ENST00000444020 547 ntBASIC2.13□□□□□ -2.07
RORAP35398 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.13□□□□□ -2.07
RORAP35398 AL121769.1-201ENST00000469473 401 ntBASIC2.13□□□□□ -2.07
RORAP35398 TRBV1-201ENST00000476502 284 ntBASIC2.13□□□□□ -2.07
RORAP35398 MTND2P14-201ENST00000482139 351 ntBASIC2.13□□□□□ -2.07
RORAP35398 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.13□□□□□ -2.07
RORAP35398 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.13□□□□□ -2.07
RORAP35398 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.13□□□□□ -2.07
RORAP35398 MIR892C-201ENST00000516410 77 ntBASIC2.13□□□□□ -2.07
RORAP35398 RNU6-703P-201ENST00000516946 107 ntBASIC2.13□□□□□ -2.07
RORAP35398 AC107934.1-201ENST00000522215 217 ntBASIC2.13□□□□□ -2.07
RORAP35398 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.13□□□□□ -2.07
RORAP35398 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.13□□□□□ -2.07
RORAP35398 MIR3146-201ENST00000580367 79 ntBASIC2.13□□□□□ -2.07
RORAP35398 AC005261.5-201ENST00000596280 355 ntBASIC2.13□□□□□ -2.07
RORAP35398 AC025165.5-201ENST00000602802 578 ntBASIC2.13□□□□□ -2.07
RORAP35398 AC007363.1-201ENST00000604736 620 ntBASIC2.13□□□□□ -2.07
RORAP35398 AP000860.1-201ENST00000605250 559 ntBASIC2.13□□□□□ -2.07
RORAP35398 AC090970.3-201ENST00000612566 866 ntBASIC2.13□□□□□ -2.07
RORAP35398 AC010678.1-201ENST00000614118 713 ntBASIC2.13□□□□□ -2.07
RORAP35398 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.13□□□□□ -2.07
RORAP35398 AL031601.2-202ENST00000622650 282 ntBASIC2.13□□□□□ -2.07
RORAP35398 AC007490.1-201ENST00000624321 703 ntBASIC2.13□□□□□ -2.07
RORAP35398 AC025048.6-202ENST00000627667 438 ntBASIC2.13□□□□□ -2.07
RORAP35398 AC007671.2-201ENST00000637344 619 ntBASIC2.13□□□□□ -2.07
RORAP35398 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.13□□□□□ -2.07
RORAP35398 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.13□□□□□ -2.07
RORAP35398 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
RORAP35398 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.13□□□□□ -2.07
RORAP35398 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.13□□□□□ -2.07
RORAP35398 AC092881.1-201ENST00000638218 2733 ntBASIC2.12□□□□□ -2.07
RORAP35398 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
RORAP35398 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.12□□□□□ -2.07
RORAP35398 MTND5P30-201ENST00000452896 1731 ntBASIC2.12□□□□□ -2.07
RORAP35398 RNU6-511P-201ENST00000363496 107 ntBASIC2.12□□□□□ -2.07
RORAP35398 MIR221-201ENST00000385135 110 ntBASIC2.12□□□□□ -2.07
RORAP35398 AL079342.1-201ENST00000401460 267 ntBASIC2.12□□□□□ -2.07
RORAP35398 RN7SKP158-201ENST00000410453 326 ntBASIC2.12□□□□□ -2.07
RORAP35398 RPL23AP39-201ENST00000415533 405 ntBASIC2.12□□□□□ -2.07
RORAP35398 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.12□□□□□ -2.07
RORAP35398 AL353729.1-201ENST00000425044 720 ntBASIC2.12□□□□□ -2.07
RORAP35398 WARS2P1-201ENST00000429678 537 ntBASIC2.12□□□□□ -2.07
RORAP35398 MICF-203ENST00000432679 129 ntBASIC2.12□□□□□ -2.07
RORAP35398 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.12□□□□□ -2.07
RORAP35398 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.12□□□□□ -2.07
RORAP35398 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.12□□□□□ -2.07
RORAP35398 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.12□□□□□ -2.07
RORAP35398 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.12□□□□□ -2.07
RORAP35398 DYNLL1P5-201ENST00000467158 270 ntBASIC2.12□□□□□ -2.07
RORAP35398 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.12□□□□□ -2.07
RORAP35398 AC092436.1-201ENST00000506450 503 ntBASIC2.12□□□□□ -2.07
RORAP35398 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC2.12□□□□□ -2.07
RORAP35398 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.12□□□□□ -2.07
RORAP35398 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.12□□□□□ -2.07
RORAP35398 RN7SKP265-201ENST00000516448 223 ntBASIC2.12□□□□□ -2.07
RORAP35398 RNU6-201P-201ENST00000517100 61 ntBASIC2.12□□□□□ -2.07
RORAP35398 AL138976.2-201ENST00000563989 694 ntBASIC2.12□□□□□ -2.07
RORAP35398 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC2.12□□□□□ -2.07
RORAP35398 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC2.12□□□□□ -2.07
RORAP35398 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.12□□□□□ -2.07
RORAP35398 KC877982.1-201ENST00000602313 470 ntBASIC2.12□□□□□ -2.07
RORAP35398 AC008121.1-201ENST00000603244 268 ntBASIC2.12□□□□□ -2.07
RORAP35398 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.12□□□□□ -2.07
RORAP35398 AC069294.1-201ENST00000608397 350 ntBASIC2.12□□□□□ -2.07
RORAP35398 AC103710.2-201ENST00000609912 942 ntBASIC2.12□□□□□ -2.07
RORAP35398 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.12□□□□□ -2.07
RORAP35398 uc_338.12-201ENST00000616344 181 ntBASIC2.12□□□□□ -2.07
RORAP35398 AC104010.1-201ENST00000616889 150 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms