Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 AC009238.1-201ENST00000442165 424 ntBASIC1.69□□□□□ -2.14
RPA3P35244 AC009237.6-201ENST00000446969 424 ntBASIC1.69□□□□□ -2.14
RPA3P35244 AP000542.1-201ENST00000448473 371 ntBASIC1.69□□□□□ -2.14
RPA3P35244 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.69□□□□□ -2.14
RPA3P35244 RPL37P6-201ENST00000460682 294 ntBASIC1.69□□□□□ -2.14
RPA3P35244 MTND1P16-201ENST00000465177 898 ntBASIC1.69□□□□□ -2.14
RPA3P35244 CKS1BP2-201ENST00000497342 240 ntBASIC1.69□□□□□ -2.14
RPA3P35244 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.69□□□□□ -2.14
RPA3P35244 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.69□□□□□ -2.14
RPA3P35244 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.69□□□□□ -2.14
RPA3P35244 AC107953.1-201ENST00000522216 297 ntBASIC1.69□□□□□ -2.14
RPA3P35244 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.69□□□□□ -2.14
RPA3P35244 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
RPA3P35244 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.69□□□□□ -2.14
RPA3P35244 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.69□□□□□ -2.14
RPA3P35244 AC233702.2-202ENST00000562547 291 ntBASIC1.69□□□□□ -2.14
RPA3P35244 AC012213.3-201ENST00000577199 777 ntBASIC1.69□□□□□ -2.14
RPA3P35244 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.69□□□□□ -2.14
RPA3P35244 BNIP3P23-201ENST00000599655 511 ntBASIC1.69□□□□□ -2.14
RPA3P35244 BNIP3P26-201ENST00000600827 554 ntBASIC1.69□□□□□ -2.14
RPA3P35244 AC104763.2-201ENST00000604179 382 ntBASIC1.69□□□□□ -2.14
RPA3P35244 AC068944.2-201ENST00000610373 403 ntBASIC1.69□□□□□ -2.14
RPA3P35244 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC1.69□□□□□ -2.14
RPA3P35244 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
RPA3P35244 AP000676.3-201ENST00000623299 569 ntBASIC1.69□□□□□ -2.14
RPA3P35244 PCMTD1P7-201ENST00000634506 357 ntBASIC1.69□□□□□ -2.14
RPA3P35244 AC116618.1-201ENST00000634617 774 ntBASIC1.69□□□□□ -2.14
RPA3P35244 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC1.69□□□□□ -2.14
RPA3P35244 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.69□□□□□ -2.14
RPA3P35244 DDX43P2-201ENST00000604753 1354 ntBASIC1.69□□□□□ -2.14
RPA3P35244 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
RPA3P35244 AP006437.1-201ENST00000641440 3685 ntBASIC1.68□□□□□ -2.14
RPA3P35244 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.68□□□□□ -2.14
RPA3P35244 RNU6-298P-201ENST00000390888 96 ntBASIC1.68□□□□□ -2.14
RPA3P35244 SNORA26.9-201ENST00000391322 122 ntBASIC1.68□□□□□ -2.14
RPA3P35244 AL359634.1-202ENST00000404721 284 ntBASIC1.68□□□□□ -2.14
RPA3P35244 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.68□□□□□ -2.14
RPA3P35244 AL449283.1-202ENST00000418249 604 ntBASIC1.68□□□□□ -2.14
RPA3P35244 ZNF90P2-204ENST00000419323 1075 ntBASIC1.68□□□□□ -2.14
RPA3P35244 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC1.68□□□□□ -2.14
RPA3P35244 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.68□□□□□ -2.14
RPA3P35244 AIMP1P2-201ENST00000425294 312 ntBASIC1.68□□□□□ -2.14
RPA3P35244 USP9YP11-201ENST00000427537 717 ntBASIC1.68□□□□□ -2.14
RPA3P35244 AC104651.1-201ENST00000427559 735 ntBASIC1.68□□□□□ -2.14
RPA3P35244 PAXBP1P1-201ENST00000449315 447 ntBASIC1.68□□□□□ -2.14
RPA3P35244 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.68□□□□□ -2.14
RPA3P35244 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.68□□□□□ -2.14
RPA3P35244 MTCO1P42-201ENST00000457379 726 ntBASIC1.68□□□□□ -2.14
RPA3P35244 RNA5SP233-201ENST00000459153 113 ntBASIC1.68□□□□□ -2.14
RPA3P35244 AC140059.1-201ENST00000489238 361 ntBASIC1.68□□□□□ -2.14
RPA3P35244 SNORA4.4-201ENST00000515921 135 ntBASIC1.68□□□□□ -2.14
RPA3P35244 RNU6-1183P-201ENST00000517054 60 ntBASIC1.68□□□□□ -2.14
RPA3P35244 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.68□□□□□ -2.14
RPA3P35244 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC1.68□□□□□ -2.14
RPA3P35244 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.68□□□□□ -2.14
RPA3P35244 AC131235.4-201ENST00000609288 620 ntBASIC1.68□□□□□ -2.14
RPA3P35244 AL627230.6-201ENST00000611129 280 ntBASIC1.68□□□□□ -2.14
RPA3P35244 MIR5739-201ENST00000619803 80 ntBASIC1.68□□□□□ -2.14
RPA3P35244 AC103710.2-202ENST00000641454 2853 ntBASIC1.68□□□□□ -2.14
RPA3P35244 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
RPA3P35244 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.67□□□□□ -2.14
RPA3P35244 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
RPA3P35244 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
RPA3P35244 RNU6-1159P-201ENST00000362933 107 ntBASIC1.67□□□□□ -2.14
RPA3P35244 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.67□□□□□ -2.14
RPA3P35244 Z98749.2-208ENST00000381646 500 ntBASIC1.67□□□□□ -2.14
RPA3P35244 RNU6-748P-201ENST00000384648 107 ntBASIC1.67□□□□□ -2.14
RPA3P35244 MIR19A-201ENST00000384878 82 ntBASIC1.67□□□□□ -2.14
RPA3P35244 HMGN2P39-201ENST00000398005 273 ntBASIC1.67□□□□□ -2.14
RPA3P35244 AL133475.1-201ENST00000404414 305 ntBASIC1.67□□□□□ -2.14
RPA3P35244 USP9YP6-201ENST00000413550 854 ntBASIC1.67□□□□□ -2.14
RPA3P35244 OR51A5P-201ENST00000415429 942 ntBASIC1.67□□□□□ -2.14
RPA3P35244 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.67□□□□□ -2.14
RPA3P35244 AL160275.3-201ENST00000423876 471 ntBASIC1.67□□□□□ -2.14
RPA3P35244 TRBV26OR9-2-201ENST00000432077 293 ntBASIC1.67□□□□□ -2.14
RPA3P35244 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC1.67□□□□□ -2.14
RPA3P35244 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.67□□□□□ -2.14
RPA3P35244 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.67□□□□□ -2.14
RPA3P35244 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.67□□□□□ -2.14
RPA3P35244 AC112771.1-201ENST00000463581 102 ntBASIC1.67□□□□□ -2.14
RPA3P35244 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.67□□□□□ -2.14
RPA3P35244 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.67□□□□□ -2.14
RPA3P35244 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.67□□□□□ -2.14
RPA3P35244 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.67□□□□□ -2.14
RPA3P35244 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC1.67□□□□□ -2.14
RPA3P35244 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.67□□□□□ -2.14
RPA3P35244 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.67□□□□□ -2.14
RPA3P35244 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.67□□□□□ -2.14
RPA3P35244 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
RPA3P35244 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
RPA3P35244 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1.67□□□□□ -2.14
RPA3P35244 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.67□□□□□ -2.14
RPA3P35244 AL096840.1-201ENST00000603287 93 ntBASIC1.67□□□□□ -2.14
RPA3P35244 AC007038.2-201ENST00000608095 740 ntBASIC1.67□□□□□ -2.14
RPA3P35244 AC004908.2-201ENST00000609090 574 ntBASIC1.67□□□□□ -2.14
RPA3P35244 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.67□□□□□ -2.14
RPA3P35244 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.67□□□□□ -2.14
RPA3P35244 MIR8081-201ENST00000611533 95 ntBASIC1.67□□□□□ -2.14
RPA3P35244 U6.99-201ENST00000637524 83 ntBASIC1.67□□□□□ -2.14
RPA3P35244 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms