Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
SHMT2P34897 RNU6-553P-201ENST00000364047 96 ntBASIC2.19□□□□□ -2.06
SHMT2P34897 RNU6-188P-201ENST00000364207 107 ntBASIC2.19□□□□□ -2.06
SHMT2P34897 RNU5E-6P-201ENST00000365574 115 ntBASIC2.19□□□□□ -2.06
SHMT2P34897 AL591416.1-201ENST00000404015 867 ntBASIC2.19□□□□□ -2.06
SHMT2P34897 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.19□□□□□ -2.06
SHMT2P34897 RNA5SP425-201ENST00000410336 112 ntBASIC2.19□□□□□ -2.06
SHMT2P34897 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.19□□□□□ -2.06
SHMT2P34897 AC096649.2-201ENST00000416186 393 ntBASIC2.19□□□□□ -2.06
SHMT2P34897 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.19□□□□□ -2.06
SHMT2P34897 AL592045.1-201ENST00000429867 352 ntBASIC2.19□□□□□ -2.06
SHMT2P34897 MED14P1-201ENST00000430517 648 ntBASIC2.19□□□□□ -2.06
SHMT2P34897 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.19□□□□□ -2.06
SHMT2P34897 DPPA3P1-201ENST00000448050 469 ntBASIC2.19□□□□□ -2.06
SHMT2P34897 MTND1P3-201ENST00000484956 952 ntBASIC2.19□□□□□ -2.06
SHMT2P34897 AC139453.3-201ENST00000493276 369 ntBASIC2.19□□□□□ -2.06
SHMT2P34897 GZMAP1-201ENST00000503054 631 ntBASIC2.19□□□□□ -2.06
SHMT2P34897 MTND1P22-201ENST00000510572 951 ntBASIC2.19□□□□□ -2.06
SHMT2P34897 RNU6-759P-201ENST00000516740 103 ntBASIC2.19□□□□□ -2.06
SHMT2P34897 RNU6-703P-201ENST00000516946 107 ntBASIC2.19□□□□□ -2.06
SHMT2P34897 RNU6-232P-201ENST00000517144 64 ntBASIC2.19□□□□□ -2.06
SHMT2P34897 AP000889.2-201ENST00000532684 490 ntBASIC2.19□□□□□ -2.06
SHMT2P34897 MRPS36P5-201ENST00000551909 298 ntBASIC2.19□□□□□ -2.06
SHMT2P34897 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC2.19□□□□□ -2.06
SHMT2P34897 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.19□□□□□ -2.06
SHMT2P34897 WISP1-OT1-201ENST00000602893 642 ntBASIC2.19□□□□□ -2.06
SHMT2P34897 AL022161.1-201ENST00000604390 213 ntBASIC2.19□□□□□ -2.06
SHMT2P34897 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.19□□□□□ -2.06
SHMT2P34897 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.19□□□□□ -2.06
SHMT2P34897 AL589994.2-201ENST00000621124 579 ntBASIC2.19□□□□□ -2.06
SHMT2P34897 AC099654.13-201ENST00000639774 207 ntBASIC2.19□□□□□ -2.06
SHMT2P34897 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
SHMT2P34897 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
SHMT2P34897 RNA5SP126-201ENST00000365092 109 ntBASIC2.18□□□□□ -2.06
SHMT2P34897 MIR144-201ENST00000384886 86 ntBASIC2.18□□□□□ -2.06
SHMT2P34897 FCF1P10-201ENST00000407590 479 ntBASIC2.18□□□□□ -2.06
SHMT2P34897 RNU6-920P-201ENST00000410926 92 ntBASIC2.18□□□□□ -2.06
SHMT2P34897 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.18□□□□□ -2.06
SHMT2P34897 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.18□□□□□ -2.06
SHMT2P34897 RPS15AP12-201ENST00000419498 388 ntBASIC2.18□□□□□ -2.06
SHMT2P34897 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.18□□□□□ -2.06
SHMT2P34897 AL353729.1-201ENST00000425044 720 ntBASIC2.18□□□□□ -2.06
SHMT2P34897 AC018634.1-201ENST00000437554 401 ntBASIC2.18□□□□□ -2.06
SHMT2P34897 MTATP6P7-201ENST00000453315 681 ntBASIC2.18□□□□□ -2.06
SHMT2P34897 AC104435.1-201ENST00000483483 166 ntBASIC2.18□□□□□ -2.06
SHMT2P34897 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC2.18□□□□□ -2.06
SHMT2P34897 AC008549.1-201ENST00000512900 643 ntBASIC2.18□□□□□ -2.06
SHMT2P34897 RNU6-1092P-201ENST00000516955 87 ntBASIC2.18□□□□□ -2.06
SHMT2P34897 SCARNA11.3-201ENST00000517276 130 ntBASIC2.18□□□□□ -2.06
SHMT2P34897 AP003181.2-201ENST00000528941 181 ntBASIC2.18□□□□□ -2.06
SHMT2P34897 AC084851.1-201ENST00000529105 249 ntBASIC2.18□□□□□ -2.06
SHMT2P34897 AP003122.4-201ENST00000530980 758 ntBASIC2.18□□□□□ -2.06
SHMT2P34897 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.18□□□□□ -2.06
SHMT2P34897 SNRPGP18-201ENST00000553000 214 ntBASIC2.18□□□□□ -2.06
SHMT2P34897 AC091544.4-201ENST00000555268 342 ntBASIC2.18□□□□□ -2.06
SHMT2P34897 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.18□□□□□ -2.06
SHMT2P34897 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.18□□□□□ -2.06
SHMT2P34897 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.18□□□□□ -2.06
SHMT2P34897 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.18□□□□□ -2.06
SHMT2P34897 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
SHMT2P34897 AL355598.1-201ENST00000604169 202 ntBASIC2.18□□□□□ -2.06
SHMT2P34897 AL031775.1-201ENST00000607014 887 ntBASIC2.18□□□□□ -2.06
SHMT2P34897 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.18□□□□□ -2.06
SHMT2P34897 MIR6840-201ENST00000611937 71 ntBASIC2.18□□□□□ -2.06
SHMT2P34897 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.18□□□□□ -2.06
SHMT2P34897 AC027807.2-201ENST00000616099 408 ntBASIC2.18□□□□□ -2.06
SHMT2P34897 MIR6132-201ENST00000622083 109 ntBASIC2.18□□□□□ -2.06
SHMT2P34897 MIR6873-201ENST00000622788 63 ntBASIC2.18□□□□□ -2.06
SHMT2P34897 MTND5P42-201ENST00000637720 498 ntBASIC2.18□□□□□ -2.06
SHMT2P34897 AP000553.5-201ENST00000641933 54 ntBASIC2.18□□□□□ -2.06
SHMT2P34897 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
SHMT2P34897 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
SHMT2P34897 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.17□□□□□ -2.06
SHMT2P34897 AC010889.1-201ENST00000566193 2666 ntBASIC2.17□□□□□ -2.06
SHMT2P34897 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.17□□□□□ -2.06
SHMT2P34897 ZNF658B-202ENST00000615961 3375 ntBASIC2.17□□□□□ -2.06
SHMT2P34897 RNU6-288P-201ENST00000363690 104 ntBASIC2.17□□□□□ -2.06
SHMT2P34897 RNU5E-5P-201ENST00000365379 116 ntBASIC2.17□□□□□ -2.06
SHMT2P34897 SNORA6-201ENST00000384033 151 ntBASIC2.17□□□□□ -2.06
SHMT2P34897 RNU6-301P-201ENST00000384277 107 ntBASIC2.17□□□□□ -2.06
SHMT2P34897 Y_RNA.560-201ENST00000384689 102 ntBASIC2.17□□□□□ -2.06
SHMT2P34897 SNORA3.2-201ENST00000408221 125 ntBASIC2.17□□□□□ -2.06
SHMT2P34897 RNU6-1328P-201ENST00000410938 106 ntBASIC2.17□□□□□ -2.06
SHMT2P34897 RN7SKP192-201ENST00000411291 327 ntBASIC2.17□□□□□ -2.06
SHMT2P34897 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.17□□□□□ -2.06
SHMT2P34897 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC2.17□□□□□ -2.06
SHMT2P34897 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC2.17□□□□□ -2.06
SHMT2P34897 Z99497.1-201ENST00000421282 135 ntBASIC2.17□□□□□ -2.06
SHMT2P34897 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.17□□□□□ -2.06
SHMT2P34897 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.17□□□□□ -2.06
SHMT2P34897 MTND5P25-201ENST00000430499 799 ntBASIC2.17□□□□□ -2.06
SHMT2P34897 RPL32P28-201ENST00000443577 397 ntBASIC2.17□□□□□ -2.06
SHMT2P34897 AC233279.1-201ENST00000455300 423 ntBASIC2.17□□□□□ -2.06
SHMT2P34897 BZW1P2-201ENST00000473537 826 ntBASIC2.17□□□□□ -2.06
SHMT2P34897 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC2.17□□□□□ -2.06
SHMT2P34897 AC109486.1-201ENST00000486833 374 ntBASIC2.17□□□□□ -2.06
SHMT2P34897 RPL39P36-201ENST00000490784 156 ntBASIC2.17□□□□□ -2.06
SHMT2P34897 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.17□□□□□ -2.06
SHMT2P34897 RNU5F-8P-201ENST00000515941 111 ntBASIC2.17□□□□□ -2.06
SHMT2P34897 RNA5SP337-201ENST00000517007 109 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms