Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 AC090517.3-201ENST00000625170 141 ntBASIC0.86□□□□□ -2.27
CKS2P33552 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC0.86□□□□□ -2.27
CKS2P33552 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
CKS2P33552 ZNF209P-201ENST00000593450 2304 ntBASIC0.86□□□□□ -2.27
CKS2P33552 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.85□□□□□ -2.27
CKS2P33552 RNU6-492P-201ENST00000363035 104 ntBASIC0.85□□□□□ -2.27
CKS2P33552 RNA5SP190-201ENST00000365222 118 ntBASIC0.85□□□□□ -2.27
CKS2P33552 RNU6-658P-201ENST00000384606 106 ntBASIC0.85□□□□□ -2.27
CKS2P33552 RNU6-939P-201ENST00000384634 107 ntBASIC0.85□□□□□ -2.27
CKS2P33552 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
CKS2P33552 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
CKS2P33552 SNORA40.6-201ENST00000391153 128 ntBASIC0.85□□□□□ -2.27
CKS2P33552 RNU2-68P-201ENST00000410878 191 ntBASIC0.85□□□□□ -2.27
CKS2P33552 OR6C66P-201ENST00000414917 930 ntBASIC0.85□□□□□ -2.27
CKS2P33552 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC0.85□□□□□ -2.27
CKS2P33552 MTND4LP14-201ENST00000429447 288 ntBASIC0.85□□□□□ -2.27
CKS2P33552 MTND5P25-201ENST00000430499 799 ntBASIC0.85□□□□□ -2.27
CKS2P33552 USP9YP35-201ENST00000435696 412 ntBASIC0.85□□□□□ -2.27
CKS2P33552 MTCYBP11-201ENST00000447254 1109 ntBASIC0.85□□□□□ -2.27
CKS2P33552 AC017099.1-201ENST00000448261 1028 ntBASIC0.85□□□□□ -2.27
CKS2P33552 AC092001.1-201ENST00000453012 261 ntBASIC0.85□□□□□ -2.27
CKS2P33552 AL121594.1-201ENST00000475906 575 ntBASIC0.85□□□□□ -2.27
CKS2P33552 FAM92A1P2-202ENST00000504766 877 ntBASIC0.85□□□□□ -2.27
CKS2P33552 AKIRIN2P1-201ENST00000505898 352 ntBASIC0.85□□□□□ -2.27
CKS2P33552 RNU6-581P-201ENST00000516214 105 ntBASIC0.85□□□□□ -2.27
CKS2P33552 RNU6-902P-201ENST00000517212 91 ntBASIC0.85□□□□□ -2.27
CKS2P33552 PSMA3P-201ENST00000555485 635 ntBASIC0.85□□□□□ -2.27
CKS2P33552 AC005668.1-201ENST00000571142 476 ntBASIC0.85□□□□□ -2.27
CKS2P33552 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC0.85□□□□□ -2.27
CKS2P33552 AC103987.3-201ENST00000582071 292 ntBASIC0.85□□□□□ -2.27
CKS2P33552 AL355598.1-201ENST00000604169 202 ntBASIC0.85□□□□□ -2.27
CKS2P33552 AL139344.1-201ENST00000605228 195 ntBASIC0.85□□□□□ -2.27
CKS2P33552 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC0.85□□□□□ -2.27
CKS2P33552 MIR8074-201ENST00000615081 81 ntBASIC0.85□□□□□ -2.27
CKS2P33552 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
CKS2P33552 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC0.84□□□□□ -2.27
CKS2P33552 RNU5E-1-201ENST00000362477 120 ntBASIC0.84□□□□□ -2.27
CKS2P33552 RNU6-1164P-201ENST00000364428 107 ntBASIC0.84□□□□□ -2.27
CKS2P33552 SUGT1P1-201ENST00000379514 476 ntBASIC0.84□□□□□ -2.27
CKS2P33552 SNORA22-201ENST00000383907 134 ntBASIC0.84□□□□□ -2.27
CKS2P33552 RNU6-637P-201ENST00000384050 107 ntBASIC0.84□□□□□ -2.27
CKS2P33552 SNORA22C-201ENST00000384614 134 ntBASIC0.84□□□□□ -2.27
CKS2P33552 MIR1302-8-201ENST00000408342 128 ntBASIC0.84□□□□□ -2.27
CKS2P33552 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC0.84□□□□□ -2.27
CKS2P33552 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.84□□□□□ -2.27
CKS2P33552 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.84□□□□□ -2.27
CKS2P33552 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.84□□□□□ -2.27
CKS2P33552 AL035407.1-201ENST00000429211 571 ntBASIC0.84□□□□□ -2.27
CKS2P33552 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC0.84□□□□□ -2.27
CKS2P33552 USP9YP22-201ENST00000438971 294 ntBASIC0.84□□□□□ -2.27
CKS2P33552 AC245517.4-201ENST00000448601 281 ntBASIC0.84□□□□□ -2.27
CKS2P33552 COX6CP18-201ENST00000448769 222 ntBASIC0.84□□□□□ -2.27
CKS2P33552 ARPC3P5-201ENST00000448802 534 ntBASIC0.84□□□□□ -2.27
CKS2P33552 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC0.84□□□□□ -2.27
CKS2P33552 AC013267.1-201ENST00000458227 267 ntBASIC0.84□□□□□ -2.27
CKS2P33552 AC004223.1-201ENST00000479840 271 ntBASIC0.84□□□□□ -2.27
CKS2P33552 RNA5SP445-201ENST00000515889 115 ntBASIC0.84□□□□□ -2.27
CKS2P33552 RNU6-678P-201ENST00000516832 109 ntBASIC0.84□□□□□ -2.27
CKS2P33552 AC019288.1-201ENST00000557918 224 ntBASIC0.84□□□□□ -2.27
CKS2P33552 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC0.84□□□□□ -2.27
CKS2P33552 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC0.84□□□□□ -2.27
CKS2P33552 AC090615.1-201ENST00000577519 154 ntBASIC0.84□□□□□ -2.27
CKS2P33552 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.84□□□□□ -2.27
CKS2P33552 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC0.84□□□□□ -2.27
CKS2P33552 AC097655.1-201ENST00000635075 318 ntBASIC0.84□□□□□ -2.27
CKS2P33552 ATM-228ENST00000639240 498 ntTSL 5 BASIC0.84□□□□□ -2.27
CKS2P33552 ATM-230ENST00000640388 578 ntTSL 5 BASIC0.84□□□□□ -2.27
CKS2P33552 RBBP8P1-201ENST00000449447 1844 ntBASIC0.84□□□□□ -2.28
CKS2P33552 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC0.84□□□□□ -2.28
CKS2P33552 AP000560.1-201ENST00000624150 1937 ntBASIC0.83□□□□□ -2.28
CKS2P33552 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC0.83□□□□□ -2.28
CKS2P33552 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC0.83□□□□□ -2.28
CKS2P33552 UBE2Q2P1-202ENST00000354771 883 ntBASIC0.83□□□□□ -2.28
CKS2P33552 SNORD14B-201ENST00000364533 90 ntBASIC0.83□□□□□ -2.28
CKS2P33552 RNU4-91P-201ENST00000364778 135 ntBASIC0.83□□□□□ -2.28
CKS2P33552 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
CKS2P33552 SNORD14D-201ENST00000384390 87 ntBASIC0.83□□□□□ -2.28
CKS2P33552 MIR618-201ENST00000385287 98 ntBASIC0.83□□□□□ -2.28
CKS2P33552 AL121882.1-201ENST00000422893 417 ntBASIC0.83□□□□□ -2.28
CKS2P33552 AL139421.1-201ENST00000423010 169 ntBASIC0.83□□□□□ -2.28
CKS2P33552 AL590623.1-201ENST00000427864 105 ntBASIC0.83□□□□□ -2.28
CKS2P33552 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC0.83□□□□□ -2.28
CKS2P33552 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC0.83□□□□□ -2.28
CKS2P33552 RPL39P6-201ENST00000448289 150 ntBASIC0.83□□□□□ -2.28
CKS2P33552 AC079448.1-201ENST00000449377 373 ntBASIC0.83□□□□□ -2.28
CKS2P33552 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC0.83□□□□□ -2.28
CKS2P33552 AL441985.1-201ENST00000457727 251 ntBASIC0.83□□□□□ -2.28
CKS2P33552 MEMO1P3-201ENST00000459811 302 ntBASIC0.83□□□□□ -2.28
CKS2P33552 XACT-201ENST00000468762 497 ntTSL 5 BASIC0.83□□□□□ -2.28
CKS2P33552 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC0.83□□□□□ -2.28
CKS2P33552 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC0.83□□□□□ -2.28
CKS2P33552 TMEM251P1-201ENST00000503717 318 ntBASIC0.83□□□□□ -2.28
CKS2P33552 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC0.83□□□□□ -2.28
CKS2P33552 AC008628.1-201ENST00000508663 265 ntBASIC0.83□□□□□ -2.28
CKS2P33552 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC0.83□□□□□ -2.28
CKS2P33552 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC0.83□□□□□ -2.28
CKS2P33552 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC0.83□□□□□ -2.28
CKS2P33552 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.83□□□□□ -2.28
CKS2P33552 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC0.83□□□□□ -2.28
CKS2P33552 RRN3P3-201ENST00000549207 578 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms