Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.21□□□□□ -2.06
HOXA9P31269 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.21□□□□□ -2.06
HOXA9P31269 AP000889.2-201ENST00000532684 490 ntBASIC2.21□□□□□ -2.06
HOXA9P31269 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC2.21□□□□□ -2.06
HOXA9P31269 PCMTD1P2-201ENST00000565017 355 ntBASIC2.21□□□□□ -2.06
HOXA9P31269 MIR3915-201ENST00000578518 97 ntBASIC2.21□□□□□ -2.06
HOXA9P31269 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.21□□□□□ -2.06
HOXA9P31269 AC007038.2-201ENST00000608095 740 ntBASIC2.21□□□□□ -2.06
HOXA9P31269 AC108747.1-201ENST00000609508 535 ntBASIC2.21□□□□□ -2.06
HOXA9P31269 AC103710.2-201ENST00000609912 942 ntBASIC2.21□□□□□ -2.06
HOXA9P31269 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
HOXA9P31269 AC025594.3-201ENST00000613068 790 ntBASIC2.21□□□□□ -2.06
HOXA9P31269 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.21□□□□□ -2.06
HOXA9P31269 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.21□□□□□ -2.06
HOXA9P31269 AL159972.1-201ENST00000625150 448 ntBASIC2.21□□□□□ -2.06
HOXA9P31269 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
HOXA9P31269 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.2□□□□□ -2.06
HOXA9P31269 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
HOXA9P31269 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.2□□□□□ -2.06
HOXA9P31269 AC080100.1-201ENST00000624239 5356 ntBASIC2.2□□□□□ -2.06
HOXA9P31269 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.2□□□□□ -2.06
HOXA9P31269 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
HOXA9P31269 RNU5F-6P-201ENST00000362979 116 ntBASIC2.2□□□□□ -2.06
HOXA9P31269 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
HOXA9P31269 RNU5A-2P-201ENST00000384337 116 ntBASIC2.2□□□□□ -2.06
HOXA9P31269 RNU6-809P-201ENST00000384461 107 ntBASIC2.2□□□□□ -2.06
HOXA9P31269 AL049545.1-201ENST00000401856 572 ntBASIC2.2□□□□□ -2.06
HOXA9P31269 MTCYBP36-201ENST00000404146 440 ntBASIC2.2□□□□□ -2.06
HOXA9P31269 RNU2-2P-201ENST00000410396 191 ntBASIC2.2□□□□□ -2.06
HOXA9P31269 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
HOXA9P31269 RPS6P15-201ENST00000431996 751 ntBASIC2.2□□□□□ -2.06
HOXA9P31269 AC118469.1-201ENST00000442943 488 ntBASIC2.2□□□□□ -2.06
HOXA9P31269 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.2□□□□□ -2.06
HOXA9P31269 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.2□□□□□ -2.06
HOXA9P31269 LARP1BP2-201ENST00000486594 519 ntBASIC2.2□□□□□ -2.06
HOXA9P31269 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.2□□□□□ -2.06
HOXA9P31269 RNU6-295P-201ENST00000516901 104 ntBASIC2.2□□□□□ -2.06
HOXA9P31269 AP000907.2-201ENST00000530827 353 ntBASIC2.2□□□□□ -2.06
HOXA9P31269 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.2□□□□□ -2.06
HOXA9P31269 AC123904.2-201ENST00000548059 300 ntBASIC2.2□□□□□ -2.06
HOXA9P31269 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.2□□□□□ -2.06
HOXA9P31269 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.2□□□□□ -2.06
HOXA9P31269 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.2□□□□□ -2.06
HOXA9P31269 AC105129.3-201ENST00000605455 485 ntBASIC2.2□□□□□ -2.06
HOXA9P31269 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.2□□□□□ -2.06
HOXA9P31269 U2.15-201ENST00000611544 191 ntBASIC2.2□□□□□ -2.06
HOXA9P31269 U2.16-201ENST00000613119 191 ntBASIC2.2□□□□□ -2.06
HOXA9P31269 U2.12-201ENST00000613778 191 ntBASIC2.2□□□□□ -2.06
HOXA9P31269 U2.20-201ENST00000613956 192 ntBASIC2.2□□□□□ -2.06
HOXA9P31269 U2.9-201ENST00000615427 191 ntBASIC2.2□□□□□ -2.06
HOXA9P31269 AC027807.2-201ENST00000616099 408 ntBASIC2.2□□□□□ -2.06
HOXA9P31269 U2.11-201ENST00000616345 191 ntBASIC2.2□□□□□ -2.06
HOXA9P31269 U2.2-201ENST00000616535 191 ntBASIC2.2□□□□□ -2.06
HOXA9P31269 AC008147.4-201ENST00000617570 1204 ntBASIC2.2□□□□□ -2.06
HOXA9P31269 U2.3-201ENST00000617785 191 ntBASIC2.2□□□□□ -2.06
HOXA9P31269 U2.19-201ENST00000618602 191 ntBASIC2.2□□□□□ -2.06
HOXA9P31269 RNU2-1-201ENST00000618664 191 ntBASIC2.2□□□□□ -2.06
HOXA9P31269 AL353997.5-201ENST00000618886 171 ntBASIC2.2□□□□□ -2.06
HOXA9P31269 U2.6-201ENST00000619225 191 ntBASIC2.2□□□□□ -2.06
HOXA9P31269 U2.5-201ENST00000619465 191 ntBASIC2.2□□□□□ -2.06
HOXA9P31269 U2.10-201ENST00000620268 191 ntBASIC2.2□□□□□ -2.06
HOXA9P31269 AC012640.5-201ENST00000623897 319 ntBASIC2.2□□□□□ -2.06
HOXA9P31269 AL160394.1-201ENST00000624765 724 ntBASIC2.2□□□□□ -2.06
HOXA9P31269 AL136313.1-201ENST00000624804 202 ntBASIC2.2□□□□□ -2.06
HOXA9P31269 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.2□□□□□ -2.06
HOXA9P31269 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
HOXA9P31269 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.2□□□□□ -2.06
HOXA9P31269 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.2□□□□□ -2.06
HOXA9P31269 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.19□□□□□ -2.06
HOXA9P31269 RNU6-223P-201ENST00000362830 107 ntBASIC2.19□□□□□ -2.06
HOXA9P31269 MIR325-201ENST00000385260 98 ntBASIC2.19□□□□□ -2.06
HOXA9P31269 AF228730.1-201ENST00000397972 663 ntBASIC2.19□□□□□ -2.06
HOXA9P31269 AL109755.1-201ENST00000401791 649 ntBASIC2.19□□□□□ -2.06
HOXA9P31269 AL355497.1-201ENST00000406262 551 ntBASIC2.19□□□□□ -2.06
HOXA9P31269 TXNP7-201ENST00000406296 293 ntBASIC2.19□□□□□ -2.06
HOXA9P31269 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.19□□□□□ -2.06
HOXA9P31269 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.19□□□□□ -2.06
HOXA9P31269 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.19□□□□□ -2.06
HOXA9P31269 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.19□□□□□ -2.06
HOXA9P31269 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC2.19□□□□□ -2.06
HOXA9P31269 MTCO3P45-201ENST00000443036 613 ntBASIC2.19□□□□□ -2.06
HOXA9P31269 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.19□□□□□ -2.06
HOXA9P31269 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.19□□□□□ -2.06
HOXA9P31269 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.19□□□□□ -2.06
HOXA9P31269 RPS20P20-201ENST00000460498 340 ntBASIC2.19□□□□□ -2.06
HOXA9P31269 AC010631.1-201ENST00000474150 156 ntBASIC2.19□□□□□ -2.06
HOXA9P31269 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.19□□□□□ -2.06
HOXA9P31269 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.19□□□□□ -2.06
HOXA9P31269 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC2.19□□□□□ -2.06
HOXA9P31269 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
HOXA9P31269 AF131216.2-201ENST00000512316 564 ntBASIC2.19□□□□□ -2.06
HOXA9P31269 RNU6-1282P-201ENST00000516735 96 ntBASIC2.19□□□□□ -2.06
HOXA9P31269 HMGN1P28-201ENST00000521340 364 ntBASIC2.19□□□□□ -2.06
HOXA9P31269 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.19□□□□□ -2.06
HOXA9P31269 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.19□□□□□ -2.06
HOXA9P31269 ZNF519P3-201ENST00000557158 1032 ntBASIC2.19□□□□□ -2.06
HOXA9P31269 AL356432.3-201ENST00000568952 465 ntBASIC2.19□□□□□ -2.06
HOXA9P31269 MIR5697-201ENST00000578045 78 ntBASIC2.19□□□□□ -2.06
HOXA9P31269 MIR4293-201ENST00000584305 78 ntBASIC2.19□□□□□ -2.06
HOXA9P31269 AC009977.1-201ENST00000586015 570 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms