Protein–RNA interactions for Protein: P23634

ATP2B4, Plasma membrane calcium-transporting ATPase 4, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4P23634 AL161912.2-201ENST00000565707 3007 ntBASIC5.06□□□□□ -1.6
ATP2B4P23634 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
ATP2B4P23634 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
ATP2B4P23634 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC5.06□□□□□ -1.6
ATP2B4P23634 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.06□□□□□ -1.6
ATP2B4P23634 AC016588.2-201ENST00000632484 3021 ntBASIC5.05□□□□□ -1.6
ATP2B4P23634 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
ATP2B4P23634 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
ATP2B4P23634 RNU6-595P-201ENST00000363944 107 ntBASIC5.05□□□□□ -1.6
ATP2B4P23634 RNY3P11-201ENST00000364153 102 ntBASIC5.05□□□□□ -1.6
ATP2B4P23634 MIR607-201ENST00000385241 96 ntBASIC5.05□□□□□ -1.6
ATP2B4P23634 SAR1AP2-201ENST00000392696 594 ntBASIC5.05□□□□□ -1.6
ATP2B4P23634 AL691449.1-201ENST00000426570 421 ntBASIC5.05□□□□□ -1.6
ATP2B4P23634 SNRPEP9-201ENST00000436794 238 ntBASIC5.05□□□□□ -1.6
ATP2B4P23634 RPL21P2-201ENST00000440049 481 ntBASIC5.05□□□□□ -1.6
ATP2B4P23634 AC013470.1-201ENST00000453438 462 ntBASIC5.05□□□□□ -1.6
ATP2B4P23634 RNU7-169P-201ENST00000459456 61 ntBASIC5.05□□□□□ -1.6
ATP2B4P23634 AL591473.1-201ENST00000464297 313 ntBASIC5.05□□□□□ -1.6
ATP2B4P23634 RNY3P15-201ENST00000516297 97 ntBASIC5.05□□□□□ -1.6
ATP2B4P23634 RNU6-612P-201ENST00000516909 102 ntBASIC5.05□□□□□ -1.6
ATP2B4P23634 RNA5SP143-201ENST00000516936 115 ntBASIC5.05□□□□□ -1.6
ATP2B4P23634 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.05□□□□□ -1.6
ATP2B4P23634 MIR5701-3-201ENST00000578890 82 ntBASIC5.05□□□□□ -1.6
ATP2B4P23634 MIR5701-1-201ENST00000585138 82 ntBASIC5.05□□□□□ -1.6
ATP2B4P23634 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ATP2B4P23634 AC005255.1-201ENST00000593748 216 ntBASIC5.05□□□□□ -1.6
ATP2B4P23634 AC136601.2-201ENST00000604356 474 ntBASIC5.05□□□□□ -1.6
ATP2B4P23634 HMGB1P50-201ENST00000605814 607 ntBASIC5.05□□□□□ -1.6
ATP2B4P23634 AC062037.2-201ENST00000610137 73 ntBASIC5.05□□□□□ -1.6
ATP2B4P23634 UBE2Q2P6-201ENST00000612666 153 ntBASIC5.05□□□□□ -1.6
ATP2B4P23634 MIR5701-2-201ENST00000615634 82 ntBASIC5.05□□□□□ -1.6
ATP2B4P23634 AC039056.2-201ENST00000622261 511 ntBASIC5.05□□□□□ -1.6
ATP2B4P23634 AC005086.4-201ENST00000623065 213 ntBASIC5.05□□□□□ -1.6
ATP2B4P23634 AC027309.3-201ENST00000623419 351 ntBASIC5.05□□□□□ -1.6
ATP2B4P23634 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
ATP2B4P23634 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ATP2B4P23634 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
ATP2B4P23634 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
ATP2B4P23634 AC139713.2-215ENST00000641428 5037 ntBASIC5.05□□□□□ -1.6
ATP2B4P23634 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
ATP2B4P23634 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
ATP2B4P23634 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
ATP2B4P23634 MTND5P7-201ENST00000413558 1798 ntBASIC5.04□□□□□ -1.6
ATP2B4P23634 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
ATP2B4P23634 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
ATP2B4P23634 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
ATP2B4P23634 SNORA60-201ENST00000362396 134 ntBASIC5.04□□□□□ -1.6
ATP2B4P23634 Y_RNA.276-201ENST00000364732 109 ntBASIC5.04□□□□□ -1.6
ATP2B4P23634 Y_RNA.512-201ENST00000384518 102 ntBASIC5.04□□□□□ -1.6
ATP2B4P23634 Y_RNA.551-201ENST00000384661 102 ntBASIC5.04□□□□□ -1.6
ATP2B4P23634 U3.42-201ENST00000408746 214 ntBASIC5.04□□□□□ -1.6
ATP2B4P23634 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC5.04□□□□□ -1.6
ATP2B4P23634 MTCO3P19-201ENST00000415864 321 ntBASIC5.04□□□□□ -1.6
ATP2B4P23634 AL358472.1-201ENST00000431295 329 ntBASIC5.04□□□□□ -1.6
ATP2B4P23634 AL159987.2-201ENST00000432754 307 ntBASIC5.04□□□□□ -1.6
ATP2B4P23634 DYNLT3P2-201ENST00000442517 295 ntBASIC5.04□□□□□ -1.6
ATP2B4P23634 OR2AQ1P-201ENST00000451972 200 ntBASIC5.04□□□□□ -1.6
ATP2B4P23634 AC133473.1-201ENST00000455173 299 ntBASIC5.04□□□□□ -1.6
ATP2B4P23634 RNU6-377P-201ENST00000515965 102 ntBASIC5.04□□□□□ -1.6
ATP2B4P23634 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC5.04□□□□□ -1.6
ATP2B4P23634 AC120057.2-201ENST00000571520 271 ntBASIC5.04□□□□□ -1.6
ATP2B4P23634 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC5.04□□□□□ -1.6
ATP2B4P23634 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC5.04□□□□□ -1.6
ATP2B4P23634 SRGNP1-201ENST00000603392 451 ntBASIC5.04□□□□□ -1.6
ATP2B4P23634 MIR6075-201ENST00000620782 95 ntBASIC5.04□□□□□ -1.6
ATP2B4P23634 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
ATP2B4P23634 MIR8062-201ENST00000621515 85 ntBASIC5.04□□□□□ -1.6
ATP2B4P23634 AP001642.1-201ENST00000624727 2117 ntBASIC5.04□□□□□ -1.6
ATP2B4P23634 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
ATP2B4P23634 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC5.04□□□□□ -1.6
ATP2B4P23634 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
ATP2B4P23634 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.04□□□□□ -1.6
ATP2B4P23634 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
ATP2B4P23634 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
ATP2B4P23634 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
ATP2B4P23634 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
ATP2B4P23634 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC5.03□□□□□ -1.6
ATP2B4P23634 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC5.03□□□□□ -1.6
ATP2B4P23634 RNU6-874P-201ENST00000362390 105 ntBASIC5.03□□□□□ -1.6
ATP2B4P23634 ACEA_U3.1-201ENST00000363057 217 ntBASIC5.03□□□□□ -1.6
ATP2B4P23634 RNU4-50P-201ENST00000364361 141 ntBASIC5.03□□□□□ -1.6
ATP2B4P23634 RNU5E-7P-201ENST00000365290 117 ntBASIC5.03□□□□□ -1.6
ATP2B4P23634 RNU6-213P-201ENST00000384051 104 ntBASIC5.03□□□□□ -1.6
ATP2B4P23634 MIR628-201ENST00000385229 95 ntBASIC5.03□□□□□ -1.6
ATP2B4P23634 RPL21P1-201ENST00000399532 476 ntBASIC5.03□□□□□ -1.6
ATP2B4P23634 AL445584.1-201ENST00000431451 330 ntBASIC5.03□□□□□ -1.6
ATP2B4P23634 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC5.03□□□□□ -1.6
ATP2B4P23634 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC5.03□□□□□ -1.6
ATP2B4P23634 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC5.03□□□□□ -1.6
ATP2B4P23634 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC5.03□□□□□ -1.6
ATP2B4P23634 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC5.03□□□□□ -1.6
ATP2B4P23634 AC005476.1-201ENST00000554427 397 ntBASIC5.03□□□□□ -1.6
ATP2B4P23634 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC5.03□□□□□ -1.6
ATP2B4P23634 AC140113.4-201ENST00000622087 222 ntBASIC5.03□□□□□ -1.6
ATP2B4P23634 AL354798.1-201ENST00000622505 329 ntBASIC5.03□□□□□ -1.6
ATP2B4P23634 ALG13-230ENST00000623189 458 ntTSL 3 BASIC5.03□□□□□ -1.6
ATP2B4P23634 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
ATP2B4P23634 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
ATP2B4P23634 LINC01355-201ENST00000566551 5444 ntBASIC5.02□□□□□ -1.61
ATP2B4P23634 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms