Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 MIR518D-201ENST00000385014 87 ntBASIC3.02□□□□□ -1.93
BDNFP23560 U3.37-201ENST00000408528 213 ntBASIC3.02□□□□□ -1.93
BDNFP23560 RNU4-72P-201ENST00000410754 173 ntBASIC3.02□□□□□ -1.93
BDNFP23560 Y_RNA.623-201ENST00000411128 95 ntBASIC3.02□□□□□ -1.93
BDNFP23560 AL592148.1-201ENST00000413568 445 ntBASIC3.02□□□□□ -1.93
BDNFP23560 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.02□□□□□ -1.93
BDNFP23560 MYL8P-204ENST00000431574 518 ntBASIC3.02□□□□□ -1.93
BDNFP23560 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.02□□□□□ -1.93
BDNFP23560 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.02□□□□□ -1.93
BDNFP23560 AC011753.1-201ENST00000451001 220 ntBASIC3.02□□□□□ -1.93
BDNFP23560 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.02□□□□□ -1.93
BDNFP23560 RPL21P41-201ENST00000459863 264 ntBASIC3.02□□□□□ -1.93
BDNFP23560 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.02□□□□□ -1.93
BDNFP23560 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.02□□□□□ -1.93
BDNFP23560 RN7SKP132-201ENST00000516001 208 ntBASIC3.02□□□□□ -1.93
BDNFP23560 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.02□□□□□ -1.93
BDNFP23560 OR5B19P-201ENST00000531766 928 ntBASIC3.02□□□□□ -1.93
BDNFP23560 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC3.02□□□□□ -1.93
BDNFP23560 MTATP6P24-201ENST00000576835 677 ntBASIC3.02□□□□□ -1.93
BDNFP23560 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
BDNFP23560 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
BDNFP23560 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.01□□□□□ -1.93
BDNFP23560 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.01□□□□□ -1.93
BDNFP23560 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
BDNFP23560 AL139276.1-201ENST00000311910 1001 ntBASIC3.01□□□□□ -1.93
BDNFP23560 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
BDNFP23560 RN7SKP158-201ENST00000410453 326 ntBASIC3.01□□□□□ -1.93
BDNFP23560 AC127391.1-201ENST00000411737 98 ntBASIC3.01□□□□□ -1.93
BDNFP23560 AL096701.2-201ENST00000416920 238 ntBASIC3.01□□□□□ -1.93
BDNFP23560 AL365338.1-201ENST00000422282 858 ntBASIC3.01□□□□□ -1.93
BDNFP23560 TAF9P1-201ENST00000445421 515 ntBASIC3.01□□□□□ -1.93
BDNFP23560 RPL39P40-201ENST00000445481 146 ntBASIC3.01□□□□□ -1.93
BDNFP23560 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.01□□□□□ -1.93
BDNFP23560 TAF9P2-201ENST00000454958 515 ntBASIC3.01□□□□□ -1.93
BDNFP23560 AC133134.1-201ENST00000466800 359 ntBASIC3.01□□□□□ -1.93
BDNFP23560 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.01□□□□□ -1.93
BDNFP23560 MTND4P2-201ENST00000507767 1203 ntBASIC3.01□□□□□ -1.93
BDNFP23560 AC117522.2-201ENST00000510049 657 ntBASIC3.01□□□□□ -1.93
BDNFP23560 Vault.3-201ENST00000516676 95 ntBASIC3.01□□□□□ -1.93
BDNFP23560 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.01□□□□□ -1.93
BDNFP23560 AP004607.1-201ENST00000524456 203 ntBASIC3.01□□□□□ -1.93
BDNFP23560 PSMA3P-201ENST00000555485 635 ntBASIC3.01□□□□□ -1.93
BDNFP23560 GTF3AP2-201ENST00000557014 266 ntBASIC3.01□□□□□ -1.93
BDNFP23560 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.01□□□□□ -1.93
BDNFP23560 AC009977.1-201ENST00000586015 570 ntBASIC3.01□□□□□ -1.93
BDNFP23560 AC012065.4-201ENST00000602445 679 ntBASIC3.01□□□□□ -1.93
BDNFP23560 AL138889.2-201ENST00000603883 242 ntBASIC3.01□□□□□ -1.93
BDNFP23560 AL133173.2-201ENST00000614270 90 ntBASIC3.01□□□□□ -1.93
BDNFP23560 AC009159.2-201ENST00000617603 606 ntBASIC3.01□□□□□ -1.93
BDNFP23560 AL355493.4-201ENST00000618530 292 ntBASIC3.01□□□□□ -1.93
BDNFP23560 AC099654.13-201ENST00000639774 207 ntBASIC3.01□□□□□ -1.93
BDNFP23560 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
BDNFP23560 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
BDNFP23560 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
BDNFP23560 ZNF271P-202ENST00000465539 1970 ntBASIC3.01□□□□□ -1.93
BDNFP23560 HAUS6P2-201ENST00000433254 2404 ntBASIC3.01□□□□□ -1.93
BDNFP23560 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
BDNFP23560 RNU6-858P-201ENST00000362436 107 ntBASIC3□□□□□ -1.93
BDNFP23560 RNU6-179P-201ENST00000363350 107 ntBASIC3□□□□□ -1.93
BDNFP23560 RNA5SP125-201ENST00000364843 120 ntBASIC3□□□□□ -1.93
BDNFP23560 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC3□□□□□ -1.93
BDNFP23560 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC3□□□□□ -1.93
BDNFP23560 AL160275.3-201ENST00000423876 471 ntBASIC3□□□□□ -1.93
BDNFP23560 AC007283.2-201ENST00000424739 197 ntBASIC3□□□□□ -1.93
BDNFP23560 AC087499.2-201ENST00000432861 149 ntBASIC3□□□□□ -1.93
BDNFP23560 AC105272.1-201ENST00000438604 198 ntBASIC3□□□□□ -1.93
BDNFP23560 AC016691.1-201ENST00000441321 413 ntBASIC3□□□□□ -1.93
BDNFP23560 AC124916.1-201ENST00000444020 547 ntBASIC3□□□□□ -1.93
BDNFP23560 AL133217.1-201ENST00000450980 425 ntBASIC3□□□□□ -1.93
BDNFP23560 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3□□□□□ -1.93
BDNFP23560 AL583843.1-201ENST00000456070 346 ntBASIC3□□□□□ -1.93
BDNFP23560 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3□□□□□ -1.93
BDNFP23560 FAM92A1P2-202ENST00000504766 877 ntBASIC3□□□□□ -1.93
BDNFP23560 AC008526.1-201ENST00000509149 338 ntBASIC3□□□□□ -1.93
BDNFP23560 AF213884.2-201ENST00000510417 903 ntBASIC3□□□□□ -1.93
BDNFP23560 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3□□□□□ -1.93
BDNFP23560 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3□□□□□ -1.93
BDNFP23560 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
BDNFP23560 RANP3-201ENST00000530970 276 ntBASIC3□□□□□ -1.93
BDNFP23560 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3□□□□□ -1.93
BDNFP23560 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3□□□□□ -1.93
BDNFP23560 AC092325.1-201ENST00000566449 554 ntBASIC3□□□□□ -1.93
BDNFP23560 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
BDNFP23560 ELOCP29-201ENST00000588193 334 ntBASIC3□□□□□ -1.93
BDNFP23560 AL353778.1-201ENST00000603149 408 ntBASIC3□□□□□ -1.93
BDNFP23560 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3□□□□□ -1.93
BDNFP23560 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3□□□□□ -1.93
BDNFP23560 AC138649.3-201ENST00000622154 254 ntBASIC3□□□□□ -1.93
BDNFP23560 SCARNA4-202ENST00000625402 129 ntBASIC3□□□□□ -1.93
BDNFP23560 AC008993.2-201ENST00000631744 806 ntBASIC3□□□□□ -1.93
BDNFP23560 HSPA8P4-201ENST00000511877 1920 ntBASIC2.99□□□□□ -1.93
BDNFP23560 AC006020.1-201ENST00000420179 1854 ntBASIC2.99□□□□□ -1.93
BDNFP23560 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
BDNFP23560 RNU1-35P-201ENST00000362782 153 ntBASIC2.99□□□□□ -1.93
BDNFP23560 SNORD114-19-201ENST00000363072 75 ntBASIC2.99□□□□□ -1.93
BDNFP23560 RPS4XP7-201ENST00000406274 780 ntBASIC2.99□□□□□ -1.93
BDNFP23560 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.99□□□□□ -1.93
BDNFP23560 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.99□□□□□ -1.93
BDNFP23560 AC112771.1-201ENST00000463581 102 ntBASIC2.99□□□□□ -1.93
BDNFP23560 HMGB1P30-201ENST00000492455 606 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 128.7 ms