Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AC140113.4-201ENST00000622087 222 ntBASIC5.08□□□□□ -1.6
RFX1P22670 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RFX1P22670 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RFX1P22670 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.08□□□□□ -1.6
RFX1P22670 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC5.08□□□□□ -1.6
RFX1P22670 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
RFX1P22670 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RFX1P22670 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.08□□□□□ -1.6
RFX1P22670 AP000560.1-201ENST00000624150 1937 ntBASIC5.07□□□□□ -1.6
RFX1P22670 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RFX1P22670 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.07□□□□□ -1.6
RFX1P22670 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC5.07□□□□□ -1.6
RFX1P22670 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.07□□□□□ -1.6
RFX1P22670 Y_RNA.19-201ENST00000362462 99 ntBASIC5.07□□□□□ -1.6
RFX1P22670 RNU6-942P-201ENST00000363002 107 ntBASIC5.07□□□□□ -1.6
RFX1P22670 RNU6-806P-201ENST00000365147 105 ntBASIC5.07□□□□□ -1.6
RFX1P22670 Y_RNA.376-201ENST00000365638 108 ntBASIC5.07□□□□□ -1.6
RFX1P22670 RNU6-611P-201ENST00000384276 104 ntBASIC5.07□□□□□ -1.6
RFX1P22670 RNU6-658P-201ENST00000384606 106 ntBASIC5.07□□□□□ -1.6
RFX1P22670 U3.22-201ENST00000391120 215 ntBASIC5.07□□□□□ -1.6
RFX1P22670 MIR190B-201ENST00000401119 79 ntBASIC5.07□□□□□ -1.6
RFX1P22670 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC5.07□□□□□ -1.6
RFX1P22670 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC5.07□□□□□ -1.6
RFX1P22670 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.07□□□□□ -1.6
RFX1P22670 AC079168.2-201ENST00000453977 416 ntBASIC5.07□□□□□ -1.6
RFX1P22670 SNORD127-201ENST00000458892 86 ntBASIC5.07□□□□□ -1.6
RFX1P22670 RNU6-1132P-201ENST00000459214 107 ntBASIC5.07□□□□□ -1.6
RFX1P22670 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC5.07□□□□□ -1.6
RFX1P22670 AC109327.1-201ENST00000471666 403 ntBASIC5.07□□□□□ -1.6
RFX1P22670 AC084357.1-201ENST00000473404 255 ntBASIC5.07□□□□□ -1.6
RFX1P22670 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC5.07□□□□□ -1.6
RFX1P22670 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC5.07□□□□□ -1.6
RFX1P22670 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC5.07□□□□□ -1.6
RFX1P22670 AC091868.1-201ENST00000508746 304 ntBASIC5.07□□□□□ -1.6
RFX1P22670 RNU6-397P-201ENST00000516226 104 ntBASIC5.07□□□□□ -1.6
RFX1P22670 MIR2355-201ENST00000517199 87 ntBASIC5.07□□□□□ -1.6
RFX1P22670 AC034114.1-201ENST00000520293 285 ntBASIC5.07□□□□□ -1.6
RFX1P22670 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC5.07□□□□□ -1.6
RFX1P22670 AC103858.2-201ENST00000621471 543 ntBASIC5.07□□□□□ -1.6
RFX1P22670 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC5.07□□□□□ -1.6
RFX1P22670 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RFX1P22670 SCN1A-220ENST00000641603 12506 ntBASIC5.07□□□□□ -1.6
RFX1P22670 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
RFX1P22670 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
RFX1P22670 AC010615.1-201ENST00000594254 1764 ntBASIC5.06□□□□□ -1.6
RFX1P22670 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC5.06□□□□□ -1.6
RFX1P22670 AC126323.6-202ENST00000568092 3511 ntBASIC5.06□□□□□ -1.6
RFX1P22670 Y_RNA.123-201ENST00000363338 102 ntBASIC5.06□□□□□ -1.6
RFX1P22670 RNA5SP447-201ENST00000363749 119 ntBASIC5.06□□□□□ -1.6
RFX1P22670 CRP-203ENST00000368111 512 ntTSL 3 BASIC5.06□□□□□ -1.6
RFX1P22670 Y_RNA.471-201ENST00000384312 102 ntBASIC5.06□□□□□ -1.6
RFX1P22670 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.06□□□□□ -1.6
RFX1P22670 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.06□□□□□ -1.6
RFX1P22670 AC005154.2-201ENST00000438110 379 ntBASIC5.06□□□□□ -1.6
RFX1P22670 RPL23AP14-201ENST00000468281 468 ntBASIC5.06□□□□□ -1.6
RFX1P22670 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
RFX1P22670 AC074250.1-201ENST00000511117 192 ntBASIC5.06□□□□□ -1.6
RFX1P22670 RNU7-175P-201ENST00000515915 61 ntBASIC5.06□□□□□ -1.6
RFX1P22670 HSPE1P20-201ENST00000538133 289 ntBASIC5.06□□□□□ -1.6
RFX1P22670 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC5.06□□□□□ -1.6
RFX1P22670 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC5.06□□□□□ -1.6
RFX1P22670 AC060766.3-201ENST00000591442 263 ntBASIC5.06□□□□□ -1.6
RFX1P22670 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC5.06□□□□□ -1.6
RFX1P22670 U6.104-201ENST00000637979 90 ntBASIC5.06□□□□□ -1.6
RFX1P22670 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.06□□□□□ -1.6
RFX1P22670 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.06□□□□□ -1.6
RFX1P22670 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
RFX1P22670 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.06□□□□□ -1.6
RFX1P22670 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.06□□□□□ -1.6
RFX1P22670 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
RFX1P22670 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RFX1P22670 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RFX1P22670 MAPK10-303ENST00000641324 3959 ntBASIC5.05□□□□□ -1.6
RFX1P22670 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RFX1P22670 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
RFX1P22670 RNU1-76P-201ENST00000362903 159 ntBASIC5.05□□□□□ -1.6
RFX1P22670 U3.13-201ENST00000364804 214 ntBASIC5.05□□□□□ -1.6
RFX1P22670 RNU6-708P-201ENST00000384217 107 ntBASIC5.05□□□□□ -1.6
RFX1P22670 SNORA57.1-201ENST00000391227 145 ntBASIC5.05□□□□□ -1.6
RFX1P22670 RNU6ATAC23P-201ENST00000408448 123 ntBASIC5.05□□□□□ -1.6
RFX1P22670 RN7SKP267-201ENST00000410381 285 ntBASIC5.05□□□□□ -1.6
RFX1P22670 CRYBB2P1-203ENST00000415709 538 ntBASIC5.05□□□□□ -1.6
RFX1P22670 TMEM167AP1-201ENST00000423409 219 ntBASIC5.05□□□□□ -1.6
RFX1P22670 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC5.05□□□□□ -1.6
RFX1P22670 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.05□□□□□ -1.6
RFX1P22670 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC5.05□□□□□ -1.6
RFX1P22670 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC5.05□□□□□ -1.6
RFX1P22670 NACAP3-201ENST00000552100 481 ntBASIC5.05□□□□□ -1.6
RFX1P22670 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.05□□□□□ -1.6
RFX1P22670 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.05□□□□□ -1.6
RFX1P22670 AL356157.2-201ENST00000605122 111 ntBASIC5.05□□□□□ -1.6
RFX1P22670 AC130454.1-201ENST00000622948 401 ntBASIC5.05□□□□□ -1.6
RFX1P22670 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.05□□□□□ -1.6
RFX1P22670 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
RFX1P22670 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.05□□□□□ -1.6
RFX1P22670 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RFX1P22670 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.05□□□□□ -1.6
RFX1P22670 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC5.05□□□□□ -1.6
RFX1P22670 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC5.04□□□□□ -1.6
RFX1P22670 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms