Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 AL391834.2-201ENST00000609982 546 ntBASIC1.88□□□□□ -2.11
USF1P22415 AC010608.3-201ENST00000625048 527 ntBASIC1.88□□□□□ -2.11
USF1P22415 MIR219B-201ENST00000637023 88 ntBASIC1.88□□□□□ -2.11
USF1P22415 U6.99-201ENST00000637524 83 ntBASIC1.88□□□□□ -2.11
USF1P22415 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.88□□□□□ -2.11
USF1P22415 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
USF1P22415 HSPA8P4-201ENST00000511877 1920 ntBASIC1.87□□□□□ -2.11
USF1P22415 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
USF1P22415 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
USF1P22415 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.87□□□□□ -2.11
USF1P22415 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
USF1P22415 AL359851.1-201ENST00000569460 4997 ntBASIC1.87□□□□□ -2.11
USF1P22415 ZNF29P-201ENST00000225587 168 ntBASIC1.87□□□□□ -2.11
USF1P22415 MIR221-201ENST00000385135 110 ntBASIC1.87□□□□□ -2.11
USF1P22415 RNU6-482P-201ENST00000391068 107 ntBASIC1.87□□□□□ -2.11
USF1P22415 RNU6-817P-201ENST00000391083 104 ntBASIC1.87□□□□□ -2.11
USF1P22415 RNU2-40P-201ENST00000410833 196 ntBASIC1.87□□□□□ -2.11
USF1P22415 AC078974.1-201ENST00000411597 223 ntBASIC1.87□□□□□ -2.11
USF1P22415 HMGB1P11-201ENST00000413899 637 ntBASIC1.87□□□□□ -2.11
USF1P22415 MTND1P23-201ENST00000416931 372 ntBASIC1.87□□□□□ -2.11
USF1P22415 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.87□□□□□ -2.11
USF1P22415 AL354692.1-201ENST00000423044 315 ntBASIC1.87□□□□□ -2.11
USF1P22415 RAC1P6-201ENST00000423911 575 ntBASIC1.87□□□□□ -2.11
USF1P22415 EIF4EP4-201ENST00000424916 578 ntBASIC1.87□□□□□ -2.11
USF1P22415 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.87□□□□□ -2.11
USF1P22415 UBE2FP3-201ENST00000436366 524 ntBASIC1.87□□□□□ -2.11
USF1P22415 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.87□□□□□ -2.11
USF1P22415 BRK1P2-201ENST00000442875 223 ntBASIC1.87□□□□□ -2.11
USF1P22415 AP001324.2-201ENST00000461163 319 ntBASIC1.87□□□□□ -2.11
USF1P22415 KLF3P2-201ENST00000465138 268 ntBASIC1.87□□□□□ -2.11
USF1P22415 RPL23AP42-201ENST00000471152 471 ntBASIC1.87□□□□□ -2.11
USF1P22415 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.87□□□□□ -2.11
USF1P22415 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.87□□□□□ -2.11
USF1P22415 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.87□□□□□ -2.11
USF1P22415 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.87□□□□□ -2.11
USF1P22415 MTCYBP22-201ENST00000603788 447 ntBASIC1.87□□□□□ -2.11
USF1P22415 AC025754.2-201ENST00000606491 432 ntBASIC1.87□□□□□ -2.11
USF1P22415 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.87□□□□□ -2.11
USF1P22415 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC1.87□□□□□ -2.11
USF1P22415 AC022306.3-201ENST00000619930 550 ntBASIC1.87□□□□□ -2.11
USF1P22415 AC013470.4-201ENST00000619978 986 ntBASIC1.87□□□□□ -2.11
USF1P22415 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC1.87□□□□□ -2.11
USF1P22415 AC103706.2-201ENST00000638080 240 ntBASIC1.87□□□□□ -2.11
USF1P22415 AC006927.4-201ENST00000639187 543 ntBASIC1.87□□□□□ -2.11
USF1P22415 AC092881.1-201ENST00000638218 2733 ntBASIC1.87□□□□□ -2.11
USF1P22415 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.86□□□□□ -2.11
USF1P22415 RNU4-52P-201ENST00000384209 138 ntBASIC1.86□□□□□ -2.11
USF1P22415 RNU6-748P-201ENST00000384648 107 ntBASIC1.86□□□□□ -2.11
USF1P22415 SNORA64-201ENST00000384674 134 ntBASIC1.86□□□□□ -2.11
USF1P22415 AL079342.1-201ENST00000401460 267 ntBASIC1.86□□□□□ -2.11
USF1P22415 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.86□□□□□ -2.11
USF1P22415 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.86□□□□□ -2.11
USF1P22415 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.86□□□□□ -2.11
USF1P22415 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC1.86□□□□□ -2.11
USF1P22415 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.86□□□□□ -2.11
USF1P22415 AC004383.1-201ENST00000438135 289 ntBASIC1.86□□□□□ -2.11
USF1P22415 MTND4P25-201ENST00000441039 533 ntBASIC1.86□□□□□ -2.11
USF1P22415 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.86□□□□□ -2.11
USF1P22415 AC124916.1-201ENST00000444020 547 ntBASIC1.86□□□□□ -2.11
USF1P22415 AC092001.1-201ENST00000453012 261 ntBASIC1.86□□□□□ -2.11
USF1P22415 RNU6-953P-201ENST00000459154 107 ntBASIC1.86□□□□□ -2.11
USF1P22415 SNORD97-201ENST00000459187 142 ntBASIC1.86□□□□□ -2.11
USF1P22415 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.86□□□□□ -2.11
USF1P22415 AC072039.1-201ENST00000477611 581 ntBASIC1.86□□□□□ -2.11
USF1P22415 AC068587.2-201ENST00000478386 781 ntBASIC1.86□□□□□ -2.11
USF1P22415 RPS27P21-201ENST00000486977 252 ntBASIC1.86□□□□□ -2.11
USF1P22415 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.86□□□□□ -2.11
USF1P22415 MRPS33P3-201ENST00000513456 322 ntBASIC1.86□□□□□ -2.11
USF1P22415 RNU6-581P-201ENST00000516214 105 ntBASIC1.86□□□□□ -2.11
USF1P22415 MTATP6P15-201ENST00000527233 835 ntBASIC1.86□□□□□ -2.11
USF1P22415 AL356432.3-201ENST00000568952 465 ntBASIC1.86□□□□□ -2.11
USF1P22415 AL670379.6-201ENST00000603753 252 ntBASIC1.86□□□□□ -2.11
USF1P22415 AL670379.11-201ENST00000604059 253 ntBASIC1.86□□□□□ -2.11
USF1P22415 AL358072.1-201ENST00000604156 575 ntBASIC1.86□□□□□ -2.11
USF1P22415 AC112187.2-201ENST00000604345 283 ntBASIC1.86□□□□□ -2.11
USF1P22415 AC008162.1-201ENST00000604718 254 ntBASIC1.86□□□□□ -2.11
USF1P22415 AL670379.1-201ENST00000604752 252 ntBASIC1.86□□□□□ -2.11
USF1P22415 AL670379.5-201ENST00000605253 252 ntBASIC1.86□□□□□ -2.11
USF1P22415 AL670379.12-201ENST00000605291 253 ntBASIC1.86□□□□□ -2.11
USF1P22415 AL670379.8-201ENST00000605353 252 ntBASIC1.86□□□□□ -2.11
USF1P22415 AL670379.7-201ENST00000605823 252 ntBASIC1.86□□□□□ -2.11
USF1P22415 AL109620.1-201ENST00000618738 1197 ntBASIC1.86□□□□□ -2.11
USF1P22415 MIR6766-201ENST00000622641 72 ntBASIC1.86□□□□□ -2.11
USF1P22415 AC244517.12-201ENST00000623581 663 ntBASIC1.86□□□□□ -2.11
USF1P22415 AC241585.2-209ENST00000638217 143 ntBASIC1.86□□□□□ -2.11
USF1P22415 AC131280.1-202ENST00000624067 4211 ntBASIC1.86□□□□□ -2.11
USF1P22415 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.85□□□□□ -2.11
USF1P22415 ZNF720P1-201ENST00000562403 1939 ntBASIC1.85□□□□□ -2.11
USF1P22415 CDC27P3-201ENST00000635418 1910 ntBASIC1.85□□□□□ -2.11
USF1P22415 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
USF1P22415 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.85□□□□□ -2.11
USF1P22415 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
USF1P22415 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
USF1P22415 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.85□□□□□ -2.11
USF1P22415 RNU6-83P-201ENST00000384568 112 ntBASIC1.85□□□□□ -2.11
USF1P22415 MIR764-201ENST00000390811 85 ntBASIC1.85□□□□□ -2.11
USF1P22415 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC1.85□□□□□ -2.11
USF1P22415 AL591416.1-201ENST00000404015 867 ntBASIC1.85□□□□□ -2.11
USF1P22415 RNU2-62P-201ENST00000410868 191 ntBASIC1.85□□□□□ -2.11
USF1P22415 ELOCP17-201ENST00000414751 326 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms