Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 RPS29P15-201ENST00000458329 171 ntBASIC3.96□□□□□ -1.78
ATF3P18847 RNU7-63P-201ENST00000459054 62 ntBASIC3.96□□□□□ -1.78
ATF3P18847 SRRM1P2-201ENST00000464531 1192 ntBASIC3.96□□□□□ -1.78
ATF3P18847 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.96□□□□□ -1.78
ATF3P18847 RNA5SP148-201ENST00000516527 94 ntBASIC3.96□□□□□ -1.78
ATF3P18847 AP003122.3-201ENST00000526316 255 ntBASIC3.96□□□□□ -1.78
ATF3P18847 AC084851.1-201ENST00000529105 249 ntBASIC3.96□□□□□ -1.78
ATF3P18847 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
ATF3P18847 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
ATF3P18847 AC010680.1-201ENST00000590024 3590 ntBASIC3.96□□□□□ -1.78
ATF3P18847 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
ATF3P18847 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
ATF3P18847 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
ATF3P18847 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
ATF3P18847 Y_RNA.6-201ENST00000362350 114 ntBASIC3.95□□□□□ -1.78
ATF3P18847 RNU6-1085P-201ENST00000363576 107 ntBASIC3.95□□□□□ -1.78
ATF3P18847 CALM2P3-201ENST00000400429 449 ntBASIC3.95□□□□□ -1.78
ATF3P18847 SNORA3.2-201ENST00000408221 125 ntBASIC3.95□□□□□ -1.78
ATF3P18847 UBE2V1P10-201ENST00000414685 269 ntBASIC3.95□□□□□ -1.78
ATF3P18847 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC3.95□□□□□ -1.78
ATF3P18847 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.95□□□□□ -1.78
ATF3P18847 MTCYBP5-201ENST00000423752 1135 ntBASIC3.95□□□□□ -1.78
ATF3P18847 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.95□□□□□ -1.78
ATF3P18847 NEK4P1-201ENST00000433383 879 ntBASIC3.95□□□□□ -1.78
ATF3P18847 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.95□□□□□ -1.78
ATF3P18847 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.95□□□□□ -1.78
ATF3P18847 WASF1P1-201ENST00000447560 1131 ntBASIC3.95□□□□□ -1.78
ATF3P18847 AC093392.2-201ENST00000450682 337 ntBASIC3.95□□□□□ -1.78
ATF3P18847 snoU13.28-201ENST00000459235 104 ntBASIC3.95□□□□□ -1.78
ATF3P18847 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.95□□□□□ -1.78
ATF3P18847 AC006512.1-201ENST00000468816 291 ntBASIC3.95□□□□□ -1.78
ATF3P18847 AC019235.1-201ENST00000503847 207 ntBASIC3.95□□□□□ -1.78
ATF3P18847 SUMO2P6-201ENST00000505273 288 ntBASIC3.95□□□□□ -1.78
ATF3P18847 RBBP4P6-201ENST00000508098 202 ntBASIC3.95□□□□□ -1.78
ATF3P18847 AC104806.1-201ENST00000508720 308 ntBASIC3.95□□□□□ -1.78
ATF3P18847 AC105417.1-201ENST00000514691 285 ntBASIC3.95□□□□□ -1.78
ATF3P18847 RNU6-1315P-201ENST00000517187 99 ntBASIC3.95□□□□□ -1.78
ATF3P18847 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.95□□□□□ -1.78
ATF3P18847 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
ATF3P18847 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.95□□□□□ -1.78
ATF3P18847 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.95□□□□□ -1.78
ATF3P18847 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC3.95□□□□□ -1.78
ATF3P18847 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.95□□□□□ -1.78
ATF3P18847 DUSP12P1-201ENST00000612874 516 ntBASIC3.95□□□□□ -1.78
ATF3P18847 U4.5-201ENST00000617137 123 ntBASIC3.95□□□□□ -1.78
ATF3P18847 AC068792.1-201ENST00000621354 417 ntBASIC3.95□□□□□ -1.78
ATF3P18847 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
ATF3P18847 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.95□□□□□ -1.78
ATF3P18847 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
ATF3P18847 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
ATF3P18847 OR4G2P-201ENST00000328113 903 ntBASIC3.94□□□□□ -1.78
ATF3P18847 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
ATF3P18847 RNU6-1322P-201ENST00000364309 107 ntBASIC3.94□□□□□ -1.78
ATF3P18847 SNORA14A-201ENST00000364773 135 ntBASIC3.94□□□□□ -1.78
ATF3P18847 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
ATF3P18847 RNU6-1029P-201ENST00000384109 107 ntBASIC3.94□□□□□ -1.78
ATF3P18847 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
ATF3P18847 CISD1P1-201ENST00000393907 327 ntBASIC3.94□□□□□ -1.78
ATF3P18847 AC068050.1-201ENST00000394891 380 ntBASIC3.94□□□□□ -1.78
ATF3P18847 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.94□□□□□ -1.78
ATF3P18847 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.94□□□□□ -1.78
ATF3P18847 AF274854.1-201ENST00000413236 615 ntBASIC3.94□□□□□ -1.78
ATF3P18847 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.94□□□□□ -1.78
ATF3P18847 AL596276.1-201ENST00000434465 418 ntBASIC3.94□□□□□ -1.78
ATF3P18847 AL136097.1-201ENST00000456945 913 ntBASIC3.94□□□□□ -1.78
ATF3P18847 GMFBP1-201ENST00000467831 427 ntBASIC3.94□□□□□ -1.78
ATF3P18847 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.94□□□□□ -1.78
ATF3P18847 AC117522.3-201ENST00000507974 584 ntBASIC3.94□□□□□ -1.78
ATF3P18847 RNU6-314P-201ENST00000516574 104 ntBASIC3.94□□□□□ -1.78
ATF3P18847 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.94□□□□□ -1.78
ATF3P18847 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.94□□□□□ -1.78
ATF3P18847 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.94□□□□□ -1.78
ATF3P18847 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC3.94□□□□□ -1.78
ATF3P18847 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.94□□□□□ -1.78
ATF3P18847 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.94□□□□□ -1.78
ATF3P18847 AL158827.2-201ENST00000602494 330 ntBASIC3.94□□□□□ -1.78
ATF3P18847 AC110741.2-201ENST00000605278 268 ntBASIC3.94□□□□□ -1.78
ATF3P18847 AL021997.1-201ENST00000605757 193 ntBASIC3.94□□□□□ -1.78
ATF3P18847 AL691447.3-201ENST00000635020 330 ntBASIC3.94□□□□□ -1.78
ATF3P18847 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.94□□□□□ -1.78
ATF3P18847 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.94□□□□□ -1.78
ATF3P18847 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
ATF3P18847 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
ATF3P18847 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
ATF3P18847 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
ATF3P18847 ZNF658B-202ENST00000615961 3375 ntBASIC3.93□□□□□ -1.78
ATF3P18847 MAPK10-322ENST00000641485 4530 ntBASIC3.93□□□□□ -1.78
ATF3P18847 RNU6-1287P-201ENST00000362914 107 ntBASIC3.93□□□□□ -1.78
ATF3P18847 RNA5SP322-201ENST00000363617 119 ntBASIC3.93□□□□□ -1.78
ATF3P18847 RNU6-198P-201ENST00000384258 104 ntBASIC3.93□□□□□ -1.78
ATF3P18847 RNU6-1060P-201ENST00000384664 107 ntBASIC3.93□□□□□ -1.78
ATF3P18847 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
ATF3P18847 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.93□□□□□ -1.78
ATF3P18847 AL160275.3-201ENST00000423876 471 ntBASIC3.93□□□□□ -1.78
ATF3P18847 MTCO3P30-201ENST00000426425 670 ntBASIC3.93□□□□□ -1.78
ATF3P18847 MTND1P18-201ENST00000448191 573 ntBASIC3.93□□□□□ -1.78
ATF3P18847 HMGB3P8-201ENST00000449709 577 ntBASIC3.93□□□□□ -1.78
ATF3P18847 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.93□□□□□ -1.78
ATF3P18847 AL162395.1-201ENST00000457882 422 ntBASIC3.93□□□□□ -1.78
ATF3P18847 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms