Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 SNRPEP9-201ENST00000436794 238 ntBASIC1.09□□□□□ -2.24
FREM3P0C091 RPL31P58-201ENST00000469001 379 ntBASIC1.09□□□□□ -2.24
FREM3P0C091 RNU6-528P-201ENST00000516926 100 ntBASIC1.09□□□□□ -2.24
FREM3P0C091 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC1.09□□□□□ -2.24
FREM3P0C091 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.09□□□□□ -2.24
FREM3P0C091 CBX3P7-201ENST00000532876 502 ntBASIC1.09□□□□□ -2.24
FREM3P0C091 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC1.09□□□□□ -2.24
FREM3P0C091 AL359212.1-201ENST00000556608 614 ntBASIC1.09□□□□□ -2.24
FREM3P0C091 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC1.09□□□□□ -2.24
FREM3P0C091 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.09□□□□□ -2.24
FREM3P0C091 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.09□□□□□ -2.24
FREM3P0C091 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.09□□□□□ -2.24
FREM3P0C091 AC004908.2-201ENST00000609090 574 ntBASIC1.09□□□□□ -2.24
FREM3P0C091 AC008121.3-201ENST00000618726 433 ntBASIC1.09□□□□□ -2.24
FREM3P0C091 MIR126-201ENST00000362291 85 ntBASIC1.08□□□□□ -2.24
FREM3P0C091 AL109755.1-201ENST00000401791 649 ntBASIC1.08□□□□□ -2.24
FREM3P0C091 PTGES3P2-201ENST00000407942 482 ntBASIC1.08□□□□□ -2.24
FREM3P0C091 MIR548J-201ENST00000408833 112 ntBASIC1.08□□□□□ -2.24
FREM3P0C091 RPL26P27-201ENST00000414397 437 ntBASIC1.08□□□□□ -2.24
FREM3P0C091 PPP1R11P2-201ENST00000423543 382 ntBASIC1.08□□□□□ -2.24
FREM3P0C091 AC114878.1-201ENST00000441166 358 ntBASIC1.08□□□□□ -2.24
FREM3P0C091 AL357134.1-201ENST00000445848 426 ntBASIC1.08□□□□□ -2.24
FREM3P0C091 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.08□□□□□ -2.24
FREM3P0C091 RPL39P6-201ENST00000448289 150 ntBASIC1.08□□□□□ -2.24
FREM3P0C091 RPL12P25-201ENST00000455592 494 ntBASIC1.08□□□□□ -2.24
FREM3P0C091 RNU6-1223P-201ENST00000517124 104 ntBASIC1.08□□□□□ -2.24
FREM3P0C091 AC008015.1-201ENST00000555505 465 ntBASIC1.08□□□□□ -2.24
FREM3P0C091 AL137100.2-201ENST00000555786 315 ntBASIC1.08□□□□□ -2.24
FREM3P0C091 AL713866.2-201ENST00000603579 219 ntBASIC1.08□□□□□ -2.24
FREM3P0C091 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
FREM3P0C091 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
FREM3P0C091 RNA5SP276-201ENST00000362580 94 ntBASIC1.07□□□□□ -2.24
FREM3P0C091 RNU4-38P-201ENST00000364472 129 ntBASIC1.07□□□□□ -2.24
FREM3P0C091 RNU6-203P-201ENST00000384038 104 ntBASIC1.07□□□□□ -2.24
FREM3P0C091 RNU6-1032P-201ENST00000384100 107 ntBASIC1.07□□□□□ -2.24
FREM3P0C091 TAF13P2-201ENST00000416876 286 ntBASIC1.07□□□□□ -2.24
FREM3P0C091 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC1.07□□□□□ -2.24
FREM3P0C091 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
FREM3P0C091 RPS29P23-201ENST00000458635 123 ntBASIC1.07□□□□□ -2.24
FREM3P0C091 RPS15AP17-201ENST00000470598 390 ntBASIC1.07□□□□□ -2.24
FREM3P0C091 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
FREM3P0C091 MIR4789-201ENST00000577469 82 ntBASIC1.07□□□□□ -2.24
FREM3P0C091 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
FREM3P0C091 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC1.07□□□□□ -2.24
FREM3P0C091 BBIP1P1-201ENST00000602999 279 ntBASIC1.07□□□□□ -2.24
FREM3P0C091 AC136443.5-201ENST00000603741 370 ntBASIC1.07□□□□□ -2.24
FREM3P0C091 AC103810.9-201ENST00000606688 112 ntBASIC1.07□□□□□ -2.24
FREM3P0C091 AC009233.1-201ENST00000616477 371 ntBASIC1.07□□□□□ -2.24
FREM3P0C091 MTND1P37-201ENST00000636562 264 ntBASIC1.07□□□□□ -2.24
FREM3P0C091 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
FREM3P0C091 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.07□□□□□ -2.24
FREM3P0C091 RNU6-1066P-201ENST00000363573 105 ntBASIC1.07□□□□□ -2.24
FREM3P0C091 RNU6-481P-201ENST00000384194 107 ntBASIC1.07□□□□□ -2.24
FREM3P0C091 SNORA40.19-201ENST00000390846 128 ntBASIC1.07□□□□□ -2.24
FREM3P0C091 AC078974.1-201ENST00000411597 223 ntBASIC1.07□□□□□ -2.24
FREM3P0C091 CYCSP33-201ENST00000414485 327 ntBASIC1.07□□□□□ -2.24
FREM3P0C091 MTATP6P27-201ENST00000416987 621 ntBASIC1.07□□□□□ -2.24
FREM3P0C091 RPL30P4-201ENST00000429309 333 ntBASIC1.07□□□□□ -2.24
FREM3P0C091 MTND5P25-201ENST00000430499 799 ntBASIC1.07□□□□□ -2.24
FREM3P0C091 RPS6P15-201ENST00000431996 751 ntBASIC1.07□□□□□ -2.24
FREM3P0C091 AC016691.1-201ENST00000441321 413 ntBASIC1.07□□□□□ -2.24
FREM3P0C091 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.07□□□□□ -2.24
FREM3P0C091 AC020699.1-201ENST00000505161 445 ntBASIC1.07□□□□□ -2.24
FREM3P0C091 AC008837.2-201ENST00000513076 418 ntBASIC1.07□□□□□ -2.24
FREM3P0C091 DUXAP5-201ENST00000529668 529 ntBASIC1.07□□□□□ -2.24
FREM3P0C091 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.07□□□□□ -2.24
FREM3P0C091 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.07□□□□□ -2.24
FREM3P0C091 MIR4299-201ENST00000577899 72 ntBASIC1.07□□□□□ -2.24
FREM3P0C091 AC024619.4-201ENST00000580924 316 ntBASIC1.07□□□□□ -2.24
FREM3P0C091 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.07□□□□□ -2.24
FREM3P0C091 MIR6779-201ENST00000617283 64 ntBASIC1.07□□□□□ -2.24
FREM3P0C091 AL596245.1-201ENST00000618994 362 ntBASIC1.07□□□□□ -2.24
FREM3P0C091 AC109454.4-201ENST00000623411 649 ntBASIC1.07□□□□□ -2.24
FREM3P0C091 Z75746.1-201ENST00000440243 2080 ntBASIC1.07□□□□□ -2.24
FREM3P0C091 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
FREM3P0C091 Y_RNA.25-201ENST00000362528 102 ntBASIC1.06□□□□□ -2.24
FREM3P0C091 RNU4-91P-201ENST00000364778 135 ntBASIC1.06□□□□□ -2.24
FREM3P0C091 RNU6-650P-201ENST00000365658 111 ntBASIC1.06□□□□□ -2.24
FREM3P0C091 SNORD116-23-201ENST00000384645 92 ntBASIC1.06□□□□□ -2.24
FREM3P0C091 RNU6-19P-201ENST00000384718 107 ntBASIC1.06□□□□□ -2.24
FREM3P0C091 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
FREM3P0C091 U8.14-201ENST00000390843 143 ntBASIC1.06□□□□□ -2.24
FREM3P0C091 AL592310.1-201ENST00000414330 671 ntBASIC1.06□□□□□ -2.24
FREM3P0C091 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.06□□□□□ -2.24
FREM3P0C091 FABP5P14-201ENST00000437273 393 ntBASIC1.06□□□□□ -2.24
FREM3P0C091 AC092427.1-201ENST00000439177 601 ntBASIC1.06□□□□□ -2.24
FREM3P0C091 snoU109.1-201ENST00000459339 135 ntBASIC1.06□□□□□ -2.24
FREM3P0C091 AL121594.1-201ENST00000475906 575 ntBASIC1.06□□□□□ -2.24
FREM3P0C091 RPL36AP48-201ENST00000485521 314 ntBASIC1.06□□□□□ -2.24
FREM3P0C091 AC118282.2-201ENST00000508739 374 ntBASIC1.06□□□□□ -2.24
FREM3P0C091 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.06□□□□□ -2.24
FREM3P0C091 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC1.06□□□□□ -2.24
FREM3P0C091 VBP1-203ENST00000535916 944 ntTSL 2 BASIC1.06□□□□□ -2.24
FREM3P0C091 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC1.06□□□□□ -2.24
FREM3P0C091 AL078605.1-201ENST00000603529 500 ntBASIC1.06□□□□□ -2.24
FREM3P0C091 AC132825.7-201ENST00000638744 335 ntBASIC1.06□□□□□ -2.24
FREM3P0C091 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
FREM3P0C091 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
FREM3P0C091 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
FREM3P0C091 RNU1-22P-201ENST00000363334 158 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms