Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC0.2□□□□□ -2.38
APOBP04114 RNU6-700P-201ENST00000391043 107 ntBASIC0.2□□□□□ -2.38
APOBP04114 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC0.2□□□□□ -2.38
APOBP04114 AC108157.1-201ENST00000510511 539 ntBASIC0.2□□□□□ -2.38
APOBP04114 AC091489.2-201ENST00000566263 604 ntBASIC0.2□□□□□ -2.38
APOBP04114 MIR3126-201ENST00000577443 74 ntBASIC0.2□□□□□ -2.38
APOBP04114 MIR4496-201ENST00000635896 61 ntBASIC0.2□□□□□ -2.38
APOBP04114 MIR126-201ENST00000362291 85 ntBASIC0.2□□□□□ -2.38
APOBP04114 MIR676-201ENST00000390702 67 ntBASIC0.2□□□□□ -2.38
APOBP04114 RNU7-26P-201ENST00000458980 63 ntBASIC0.2□□□□□ -2.38
APOBP04114 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC0.2□□□□□ -2.38
APOBP04114 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC0.2□□□□□ -2.38
APOBP04114 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC0.2□□□□□ -2.38
APOBP04114 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC0.2□□□□□ -2.38
APOBP04114 AC022202.1-201ENST00000613515 211 ntBASIC0.2□□□□□ -2.38
APOBP04114 AC097372.5-201ENST00000623665 376 ntBASIC0.2□□□□□ -2.38
APOBP04114 RNU6-833P-201ENST00000363486 107 ntBASIC0.19□□□□□ -2.38
APOBP04114 SNORA29-201ENST00000384183 140 ntBASIC0.19□□□□□ -2.38
APOBP04114 RNA5SP212-201ENST00000391223 107 ntBASIC0.19□□□□□ -2.38
APOBP04114 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.19□□□□□ -2.38
APOBP04114 RNU6-362P-201ENST00000516736 90 ntBASIC0.19□□□□□ -2.38
APOBP04114 AP005639.2-201ENST00000527592 928 ntBASIC0.19□□□□□ -2.38
APOBP04114 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.19□□□□□ -2.38
APOBP04114 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.19□□□□□ -2.38
APOBP04114 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC0.19□□□□□ -2.38
APOBP04114 AC090666.1-201ENST00000578241 445 ntBASIC0.19□□□□□ -2.38
APOBP04114 BNIP3P25-201ENST00000596023 559 ntBASIC0.19□□□□□ -2.38
APOBP04114 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC0.19□□□□□ -2.38
APOBP04114 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC0.19□□□□□ -2.38
APOBP04114 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC0.19□□□□□ -2.38
APOBP04114 AC084824.5-201ENST00000612009 413 ntBASIC0.19□□□□□ -2.38
APOBP04114 MT-TQ-201ENST00000387372 72 ntBASIC0.19□□□□□ -2.38
APOBP04114 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC0.19□□□□□ -2.38
APOBP04114 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.19□□□□□ -2.38
APOBP04114 RPL23AP95-201ENST00000426806 265 ntBASIC0.19□□□□□ -2.38
APOBP04114 OR2A41P-201ENST00000473586 105 ntBASIC0.19□□□□□ -2.38
APOBP04114 AC087879.1-201ENST00000474343 374 ntBASIC0.19□□□□□ -2.38
APOBP04114 AC040174.2-201ENST00000602701 465 ntBASIC0.19□□□□□ -2.38
APOBP04114 Z83818.1-201ENST00000603584 150 ntBASIC0.19□□□□□ -2.38
APOBP04114 AL161629.2-201ENST00000615347 275 ntBASIC0.19□□□□□ -2.38
APOBP04114 SNORD33-201ENST00000362761 85 ntBASIC0.19□□□□□ -2.38
APOBP04114 MIR32-201ENST00000384965 70 ntBASIC0.19□□□□□ -2.38
APOBP04114 AL035410.1-201ENST00000427409 427 ntBASIC0.19□□□□□ -2.38
APOBP04114 AC093106.2-201ENST00000428212 385 ntBASIC0.19□□□□□ -2.38
APOBP04114 MTND5P8-201ENST00000449817 1083 ntBASIC0.19□□□□□ -2.38
APOBP04114 SNORD124-201ENST00000459577 104 ntBASIC0.19□□□□□ -2.38
APOBP04114 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC0.19□□□□□ -2.38
APOBP04114 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
APOBP04114 U3.8-201ENST00000363675 217 ntBASIC0.18□□□□□ -2.38
APOBP04114 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.18□□□□□ -2.38
APOBP04114 AC023050.2-201ENST00000544968 387 ntBASIC0.18□□□□□ -2.38
APOBP04114 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC0.18□□□□□ -2.38
APOBP04114 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC0.18□□□□□ -2.38
APOBP04114 AL669831.4-202ENST00000590817 238 ntBASIC0.18□□□□□ -2.38
APOBP04114 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC0.18□□□□□ -2.38
APOBP04114 MIR100-201ENST00000385259 80 ntBASIC0.18□□□□□ -2.38
APOBP04114 AC114737.2-201ENST00000421583 173 ntBASIC0.18□□□□□ -2.38
APOBP04114 TRBV25OR9-2-201ENST00000438417 374 ntBASIC0.18□□□□□ -2.38
APOBP04114 TRBVA-201ENST00000498804 316 ntBASIC0.18□□□□□ -2.38
APOBP04114 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.18□□□□□ -2.38
APOBP04114 MIR4299-201ENST00000577899 72 ntBASIC0.18□□□□□ -2.38
APOBP04114 BNIP3P16-201ENST00000589779 534 ntBASIC0.18□□□□□ -2.38
APOBP04114 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC0.18□□□□□ -2.38
APOBP04114 AP003072.4-201ENST00000624580 310 ntBASIC0.18□□□□□ -2.38
APOBP04114 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC0.18□□□□□ -2.38
APOBP04114 U3.29-201ENST00000391296 212 ntBASIC0.18□□□□□ -2.38
APOBP04114 AC096649.2-201ENST00000416186 393 ntBASIC0.18□□□□□ -2.38
APOBP04114 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC0.18□□□□□ -2.38
APOBP04114 AC083875.1-201ENST00000419509 405 ntBASIC0.18□□□□□ -2.38
APOBP04114 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC0.18□□□□□ -2.38
APOBP04114 MIR4667-201ENST00000578933 66 ntBASIC0.18□□□□□ -2.38
APOBP04114 MIR5190-201ENST00000581537 80 ntBASIC0.18□□□□□ -2.38
APOBP04114 NIFKP6-201ENST00000598115 845 ntBASIC0.18□□□□□ -2.38
APOBP04114 AC106800.4-201ENST00000614905 153 ntBASIC0.18□□□□□ -2.38
APOBP04114 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC0.18□□□□□ -2.38
APOBP04114 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC0.18□□□□□ -2.38
APOBP04114 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC0.18□□□□□ -2.38
APOBP04114 RNU1-124P-201ENST00000363861 145 ntBASIC0.18□□□□□ -2.38
APOBP04114 RNA5SP63-201ENST00000391225 112 ntBASIC0.18□□□□□ -2.38
APOBP04114 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.18□□□□□ -2.38
APOBP04114 AC098614.2-201ENST00000426040 255 ntBASIC0.18□□□□□ -2.38
APOBP04114 RPEP5-201ENST00000441137 268 ntBASIC0.18□□□□□ -2.38
APOBP04114 AC079395.3-201ENST00000615161 484 ntBASIC0.18□□□□□ -2.38
APOBP04114 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC0.18□□□□□ -2.38
APOBP04114 MIR198-201ENST00000637333 62 ntBASIC0.18□□□□□ -2.38
APOBP04114 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC0.17□□□□□ -2.38
APOBP04114 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC0.17□□□□□ -2.38
APOBP04114 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.17□□□□□ -2.38
APOBP04114 RNU7-23P-201ENST00000459465 62 ntBASIC0.17□□□□□ -2.38
APOBP04114 RPL9P9-202ENST00000466501 579 ntBASIC0.17□□□□□ -2.38
APOBP04114 RNU5F-8P-201ENST00000515941 111 ntBASIC0.17□□□□□ -2.38
APOBP04114 MIR4493-201ENST00000584016 73 ntBASIC0.17□□□□□ -2.38
APOBP04114 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC0.17□□□□□ -2.38
APOBP04114 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.17□□□□□ -2.38
APOBP04114 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.17□□□□□ -2.38
APOBP04114 UBL5P1-201ENST00000507979 193 ntBASIC0.17□□□□□ -2.38
APOBP04114 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC0.17□□□□□ -2.38
APOBP04114 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC0.17□□□□□ -2.38
APOBP04114 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.17□□□□□ -2.38
APOBP04114 AP003717.3-201ENST00000544832 1180 ntBASIC0.17□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms