Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
COL3A1P02461 DDX18P3-201ENST00000404856 2007 ntBASIC3.72□□□□□ -1.81
COL3A1P02461 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
COL3A1P02461 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
COL3A1P02461 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.72□□□□□ -1.81
COL3A1P02461 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.72□□□□□ -1.81
COL3A1P02461 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.72□□□□□ -1.81
COL3A1P02461 RNU6-505P-201ENST00000384427 107 ntBASIC3.72□□□□□ -1.81
COL3A1P02461 MIR512-1-201ENST00000384913 84 ntBASIC3.72□□□□□ -1.81
COL3A1P02461 MIR514A2-201ENST00000385131 88 ntBASIC3.72□□□□□ -1.81
COL3A1P02461 MIR514A3-201ENST00000385132 88 ntBASIC3.72□□□□□ -1.81
COL3A1P02461 EIF5P1-201ENST00000400019 1231 ntBASIC3.72□□□□□ -1.81
COL3A1P02461 AL138827.1-201ENST00000402666 306 ntBASIC3.72□□□□□ -1.81
COL3A1P02461 AL356421.1-201ENST00000403255 413 ntBASIC3.72□□□□□ -1.81
COL3A1P02461 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.72□□□□□ -1.81
COL3A1P02461 AC114482.1-201ENST00000418010 247 ntBASIC3.72□□□□□ -1.81
COL3A1P02461 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.72□□□□□ -1.81
COL3A1P02461 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.72□□□□□ -1.81
COL3A1P02461 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.72□□□□□ -1.81
COL3A1P02461 AL513043.1-201ENST00000439124 535 ntBASIC3.72□□□□□ -1.81
COL3A1P02461 AL109933.2-201ENST00000452651 260 ntBASIC3.72□□□□□ -1.81
COL3A1P02461 CECR9-201ENST00000453421 199 ntBASIC3.72□□□□□ -1.81
COL3A1P02461 AC126389.1-201ENST00000477436 290 ntBASIC3.72□□□□□ -1.81
COL3A1P02461 AC004062.1-201ENST00000509926 645 ntBASIC3.72□□□□□ -1.81
COL3A1P02461 AC017037.2-201ENST00000513850 890 ntBASIC3.72□□□□□ -1.81
COL3A1P02461 AC026801.2-201ENST00000515352 425 ntBASIC3.72□□□□□ -1.81
COL3A1P02461 Y_RNA.665-201ENST00000516177 98 ntBASIC3.72□□□□□ -1.81
COL3A1P02461 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.72□□□□□ -1.81
COL3A1P02461 RNU6-864P-201ENST00000516256 108 ntBASIC3.72□□□□□ -1.81
COL3A1P02461 SCARNA24.1-201ENST00000516465 137 ntBASIC3.72□□□□□ -1.81
COL3A1P02461 RNU6-1137P-201ENST00000517073 99 ntBASIC3.72□□□□□ -1.81
COL3A1P02461 RPL7P20-201ENST00000520308 745 ntBASIC3.72□□□□□ -1.81
COL3A1P02461 COPS8P3-201ENST00000526024 482 ntBASIC3.72□□□□□ -1.81
COL3A1P02461 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.72□□□□□ -1.81
COL3A1P02461 AL391813.2-201ENST00000609113 322 ntBASIC3.72□□□□□ -1.81
COL3A1P02461 AC092807.2-201ENST00000609367 243 ntBASIC3.72□□□□□ -1.81
COL3A1P02461 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.72□□□□□ -1.81
COL3A1P02461 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.72□□□□□ -1.81
COL3A1P02461 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.71□□□□□ -1.81
COL3A1P02461 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
COL3A1P02461 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
COL3A1P02461 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
COL3A1P02461 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
COL3A1P02461 Y_RNA.149-201ENST00000363558 117 ntBASIC3.71□□□□□ -1.82
COL3A1P02461 SNORA5B-201ENST00000363786 132 ntBASIC3.71□□□□□ -1.82
COL3A1P02461 RNU6-702P-201ENST00000364982 107 ntBASIC3.71□□□□□ -1.82
COL3A1P02461 RNU6-38P-201ENST00000384085 107 ntBASIC3.71□□□□□ -1.82
COL3A1P02461 SNORA51.6-201ENST00000384151 125 ntBASIC3.71□□□□□ -1.82
COL3A1P02461 RNU6-225P-201ENST00000384613 103 ntBASIC3.71□□□□□ -1.82
COL3A1P02461 MIR9-1-201ENST00000385198 89 ntBASIC3.71□□□□□ -1.82
COL3A1P02461 AL606923.1-201ENST00000406616 190 ntBASIC3.71□□□□□ -1.82
COL3A1P02461 RPL37P10-201ENST00000412884 288 ntBASIC3.71□□□□□ -1.82
COL3A1P02461 AC096632.1-201ENST00000427395 310 ntBASIC3.71□□□□□ -1.82
COL3A1P02461 AC022018.1-201ENST00000430685 241 ntBASIC3.71□□□□□ -1.82
COL3A1P02461 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.71□□□□□ -1.82
COL3A1P02461 Y_RNA.653-201ENST00000459091 95 ntBASIC3.71□□□□□ -1.82
COL3A1P02461 RNU6-333P-201ENST00000459117 107 ntBASIC3.71□□□□□ -1.82
COL3A1P02461 U8.20-201ENST00000459445 131 ntBASIC3.71□□□□□ -1.82
COL3A1P02461 RPL23AP11-201ENST00000475260 469 ntBASIC3.71□□□□□ -1.82
COL3A1P02461 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.71□□□□□ -1.82
COL3A1P02461 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.71□□□□□ -1.82
COL3A1P02461 RNU6-1271P-201ENST00000517049 105 ntBASIC3.71□□□□□ -1.82
COL3A1P02461 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.71□□□□□ -1.82
COL3A1P02461 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.71□□□□□ -1.82
COL3A1P02461 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC3.71□□□□□ -1.82
COL3A1P02461 APOOP3-201ENST00000536787 586 ntBASIC3.71□□□□□ -1.82
COL3A1P02461 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.71□□□□□ -1.82
COL3A1P02461 SETP2-201ENST00000553886 926 ntBASIC3.71□□□□□ -1.82
COL3A1P02461 AL161670.1-201ENST00000554348 137 ntBASIC3.71□□□□□ -1.82
COL3A1P02461 MIR5047-201ENST00000579212 100 ntBASIC3.71□□□□□ -1.82
COL3A1P02461 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.71□□□□□ -1.82
COL3A1P02461 AL022099.1-201ENST00000604551 712 ntBASIC3.71□□□□□ -1.82
COL3A1P02461 AC007938.3-201ENST00000604965 623 ntBASIC3.71□□□□□ -1.82
COL3A1P02461 AC005014.2-201ENST00000607795 599 ntBASIC3.71□□□□□ -1.82
COL3A1P02461 AC083806.3-201ENST00000614016 455 ntBASIC3.71□□□□□ -1.82
COL3A1P02461 AC092628.2-201ENST00000622492 339 ntBASIC3.71□□□□□ -1.82
COL3A1P02461 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.71□□□□□ -1.82
COL3A1P02461 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
COL3A1P02461 XPOTP1-201ENST00000443317 2398 ntBASIC3.71□□□□□ -1.82
COL3A1P02461 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.71□□□□□ -1.82
COL3A1P02461 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.71□□□□□ -1.82
COL3A1P02461 MTND4P1-201ENST00000457501 1466 ntBASIC3.71□□□□□ -1.82
COL3A1P02461 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.7□□□□□ -1.82
COL3A1P02461 Y_RNA.47-201ENST00000362697 108 ntBASIC3.7□□□□□ -1.82
COL3A1P02461 Y_RNA.158-201ENST00000363651 101 ntBASIC3.7□□□□□ -1.82
COL3A1P02461 U3.12-201ENST00000364498 214 ntBASIC3.7□□□□□ -1.82
COL3A1P02461 Y_RNA.414-201ENST00000384011 101 ntBASIC3.7□□□□□ -1.82
COL3A1P02461 MIR181A2-201ENST00000384863 110 ntBASIC3.7□□□□□ -1.82
COL3A1P02461 MIR34A-201ENST00000385130 110 ntBASIC3.7□□□□□ -1.82
COL3A1P02461 MIR708-201ENST00000390708 88 ntBASIC3.7□□□□□ -1.82
COL3A1P02461 MIR548K-201ENST00000408406 116 ntBASIC3.7□□□□□ -1.82
COL3A1P02461 RNU6-1304P-201ENST00000411374 106 ntBASIC3.7□□□□□ -1.82
COL3A1P02461 AC022022.1-201ENST00000430304 178 ntBASIC3.7□□□□□ -1.82
COL3A1P02461 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.7□□□□□ -1.82
COL3A1P02461 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.7□□□□□ -1.82
COL3A1P02461 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.7□□□□□ -1.82
COL3A1P02461 AP000893.1-201ENST00000474462 794 ntBASIC3.7□□□□□ -1.82
COL3A1P02461 RPL31P13-201ENST00000484151 370 ntBASIC3.7□□□□□ -1.82
COL3A1P02461 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.7□□□□□ -1.82
COL3A1P02461 MRPS35P2-201ENST00000508242 191 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms