Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.1□□□□□ -1.91
LDLRP01130 TTC39CP1-201ENST00000512513 755 ntBASIC3.1□□□□□ -1.91
LDLRP01130 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.1□□□□□ -1.91
LDLRP01130 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.1□□□□□ -1.91
LDLRP01130 RNU6-1281P-201ENST00000516223 105 ntBASIC3.1□□□□□ -1.91
LDLRP01130 IGKV2-26-201ENST00000518305 343 ntBASIC3.1□□□□□ -1.91
LDLRP01130 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.1□□□□□ -1.91
LDLRP01130 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.1□□□□□ -1.91
LDLRP01130 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.1□□□□□ -1.91
LDLRP01130 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.1□□□□□ -1.91
LDLRP01130 MIR4672-201ENST00000583126 81 ntBASIC3.1□□□□□ -1.91
LDLRP01130 uc_338.1-201ENST00000612113 180 ntBASIC3.1□□□□□ -1.91
LDLRP01130 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.1□□□□□ -1.91
LDLRP01130 AC090132.2-201ENST00000615881 347 ntBASIC3.1□□□□□ -1.91
LDLRP01130 AC002076.2-201ENST00000617362 122 ntBASIC3.1□□□□□ -1.91
LDLRP01130 YWHAEP7-203ENST00000622054 312 ntBASIC3.1□□□□□ -1.91
LDLRP01130 FRG1KP-201ENST00000623592 341 ntBASIC3.1□□□□□ -1.91
LDLRP01130 AC024614.3-201ENST00000637860 256 ntBASIC3.1□□□□□ -1.91
LDLRP01130 AC008568.2-201ENST00000623862 2313 ntBASIC3.1□□□□□ -1.91
LDLRP01130 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.1□□□□□ -1.91
LDLRP01130 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.09□□□□□ -1.91
LDLRP01130 AC093831.2-201ENST00000624393 3427 ntBASIC3.09□□□□□ -1.91
LDLRP01130 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.09□□□□□ -1.91
LDLRP01130 AC008264.2-201ENST00000610193 3731 ntBASIC3.09□□□□□ -1.91
LDLRP01130 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.09□□□□□ -1.91
LDLRP01130 HSPE1P11-201ENST00000339579 310 ntBASIC3.09□□□□□ -1.91
LDLRP01130 RNU6-451P-201ENST00000362921 107 ntBASIC3.09□□□□□ -1.91
LDLRP01130 Y_RNA.86-201ENST00000363020 111 ntBASIC3.09□□□□□ -1.91
LDLRP01130 RNA5SP197-201ENST00000363357 119 ntBASIC3.09□□□□□ -1.91
LDLRP01130 Y_RNA.142-201ENST00000363491 102 ntBASIC3.09□□□□□ -1.91
LDLRP01130 RNA5SP126-201ENST00000365092 109 ntBASIC3.09□□□□□ -1.91
LDLRP01130 Y_RNA.381-201ENST00000365666 102 ntBASIC3.09□□□□□ -1.91
LDLRP01130 SNORA46-201ENST00000384762 135 ntBASIC3.09□□□□□ -1.91
LDLRP01130 AL356057.2-201ENST00000403318 432 ntBASIC3.09□□□□□ -1.91
LDLRP01130 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
LDLRP01130 RPL5P18-201ENST00000406671 891 ntBASIC3.09□□□□□ -1.91
LDLRP01130 MIR1290-201ENST00000408735 78 ntBASIC3.09□□□□□ -1.91
LDLRP01130 RN7SKP111-201ENST00000410349 271 ntBASIC3.09□□□□□ -1.91
LDLRP01130 AC245054.2-201ENST00000415639 319 ntBASIC3.09□□□□□ -1.91
LDLRP01130 BTF3L4P3-201ENST00000418879 476 ntBASIC3.09□□□□□ -1.91
LDLRP01130 AL451054.2-201ENST00000420896 202 ntBASIC3.09□□□□□ -1.91
LDLRP01130 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.09□□□□□ -1.91
LDLRP01130 AL356867.1-201ENST00000429623 299 ntBASIC3.09□□□□□ -1.91
LDLRP01130 AC092573.2-201ENST00000434546 243 ntBASIC3.09□□□□□ -1.91
LDLRP01130 AC244505.4-201ENST00000434905 287 ntBASIC3.09□□□□□ -1.91
LDLRP01130 AC093019.1-201ENST00000443135 252 ntBASIC3.09□□□□□ -1.91
LDLRP01130 SSXP5-201ENST00000443473 287 ntBASIC3.09□□□□□ -1.91
LDLRP01130 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.09□□□□□ -1.91
LDLRP01130 AC020550.1-201ENST00000447385 163 ntBASIC3.09□□□□□ -1.91
LDLRP01130 UQCRHP3-201ENST00000451503 251 ntBASIC3.09□□□□□ -1.91
LDLRP01130 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.09□□□□□ -1.91
LDLRP01130 AC010493.1-201ENST00000513479 292 ntBASIC3.09□□□□□ -1.91
LDLRP01130 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.09□□□□□ -1.91
LDLRP01130 SCARNA15.2-201ENST00000516409 127 ntBASIC3.09□□□□□ -1.91
LDLRP01130 RNU6-1092P-201ENST00000516955 87 ntBASIC3.09□□□□□ -1.91
LDLRP01130 AC090572.1-201ENST00000519251 160 ntBASIC3.09□□□□□ -1.91
LDLRP01130 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.09□□□□□ -1.91
LDLRP01130 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.09□□□□□ -1.91
LDLRP01130 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.09□□□□□ -1.91
LDLRP01130 HPRT1P3-201ENST00000539521 576 ntBASIC3.09□□□□□ -1.91
LDLRP01130 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.09□□□□□ -1.91
LDLRP01130 AL359212.1-201ENST00000556608 614 ntBASIC3.09□□□□□ -1.91
LDLRP01130 MIR4795-201ENST00000584182 89 ntBASIC3.09□□□□□ -1.91
LDLRP01130 AC002545.1-201ENST00000592511 181 ntBASIC3.09□□□□□ -1.91
LDLRP01130 AC012507.3-201ENST00000603556 477 ntBASIC3.09□□□□□ -1.91
LDLRP01130 AC006023.1-201ENST00000603944 259 ntBASIC3.09□□□□□ -1.91
LDLRP01130 BNIP3P10-201ENST00000605360 577 ntBASIC3.09□□□□□ -1.91
LDLRP01130 AC004832.5-201ENST00000608677 401 ntBASIC3.09□□□□□ -1.91
LDLRP01130 MIR7106-201ENST00000612419 65 ntBASIC3.09□□□□□ -1.91
LDLRP01130 AC006504.8-201ENST00000621046 635 ntBASIC3.09□□□□□ -1.91
LDLRP01130 AC091903.1-201ENST00000624322 454 ntBASIC3.09□□□□□ -1.91
LDLRP01130 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.09□□□□□ -1.91
LDLRP01130 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
LDLRP01130 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
LDLRP01130 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC3.09□□□□□ -1.92
LDLRP01130 FAM35CP-201ENST00000554755 2470 ntBASIC3.09□□□□□ -1.92
LDLRP01130 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
LDLRP01130 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
LDLRP01130 Z83843.1-201ENST00000604070 3685 ntBASIC3.08□□□□□ -1.92
LDLRP01130 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.08□□□□□ -1.92
LDLRP01130 MAPK10-322ENST00000641485 4530 ntBASIC3.08□□□□□ -1.92
LDLRP01130 RNY3P3-201ENST00000363816 102 ntBASIC3.08□□□□□ -1.92
LDLRP01130 MIR325-201ENST00000385260 98 ntBASIC3.08□□□□□ -1.92
LDLRP01130 AC068050.1-201ENST00000394891 380 ntBASIC3.08□□□□□ -1.92
LDLRP01130 RPS20P15-201ENST00000412792 311 ntBASIC3.08□□□□□ -1.92
LDLRP01130 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.08□□□□□ -1.92
LDLRP01130 PDCL2P1-201ENST00000419302 352 ntBASIC3.08□□□□□ -1.92
LDLRP01130 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.08□□□□□ -1.92
LDLRP01130 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.08□□□□□ -1.92
LDLRP01130 AC007919.1-201ENST00000429380 217 ntBASIC3.08□□□□□ -1.92
LDLRP01130 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.08□□□□□ -1.92
LDLRP01130 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.08□□□□□ -1.92
LDLRP01130 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC3.08□□□□□ -1.92
LDLRP01130 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.08□□□□□ -1.92
LDLRP01130 RN7SL432P-201ENST00000484057 298 ntBASIC3.08□□□□□ -1.92
LDLRP01130 AC110794.1-201ENST00000505816 425 ntBASIC3.08□□□□□ -1.92
LDLRP01130 FGF7P4-201ENST00000509595 295 ntBASIC3.08□□□□□ -1.92
LDLRP01130 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.08□□□□□ -1.92
LDLRP01130 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.08□□□□□ -1.92
LDLRP01130 RNU6-835P-201ENST00000516974 104 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 159.4 ms